EWM28669.1, cds1997 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28669.1 vs. NCBI_GenBank
Match: gi|585111092|gb|EWM28669.1| (translation machinery-associated protein 22 [Nannochloropsis gaditana]) HSP 1 Score: 507.294 bits (1305), Expect = 0.000e+0 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0 Query: 1 MLVYVPYAIFSFAVCSIPPEYCIFNPPDLYADCLRWQAKCHTELLPEGASVDDMLAKLNLHNSGSGGKINSSGDGRAGANAAAGEGESTGEGEEDDGNGREEDECGKKKKGGPKGIKKKETASGGKVLIMRMSRNKRKSITVVTGLDSYPDLKLKDVAKALGKAFASGASVSDTGSGGKEIVIQGDVIDSLAIMLEEKYKVGTRDKYNDQIIKHVVHKECQETKRKHRWRTPCVPAFTRQSVKPEV 246 MLVYVPYAIFSFAVCSIPPEYCIFNPPDLYADCLRWQAKCHTELLPEGASVDDMLAKLNLHNSGSGGKINSSGDGRAGANAAAGEGESTGEGEEDDGNGREEDECGKKKKGGPKGIKKKETASGGKVLIMRMSRNKRKSITVVTGLDSYPDLKLKDVAKALGKAFASGASVSDTGSGGKEIVIQGDVIDSLAIMLEEKYKVGTRDKYNDQIIKHVVHKECQETKRKHRWRTPCVPAFTRQSVKPEV Sbjct: 1 MLVYVPYAIFSFAVCSIPPEYCIFNPPDLYADCLRWQAKCHTELLPEGASVDDMLAKLNLHNSGSGGKINSSGDGRAGANAAAGEGESTGEGEEDDGNGREEDECGKKKKGGPKGIKKKETASGGKVLIMRMSRNKRKSITVVTGLDSYPDLKLKDVAKALGKAFASGASVSDTGSGGKEIVIQGDVIDSLAIMLEEKYKVGTRDKYNDQIIKHVVHKECQETKRKHRWRTPCVPAFTRQSVKPEV 246
BLAST of EWM28669.1 vs. NCBI_GenBank
Match: gi|553189311|ref|XP_005854975.1| (rna binding protein [Nannochloropsis gaditana CCMP526] >gi|422294086|gb|EKU21386.1| rna binding protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 378.252 bits (970), Expect = 6.762e-131 Identity = 187/193 (96.89%), Postives = 187/193 (96.89%), Query Frame = 0 Query: 9 IFSFAVCSIPPEYCIFNPPDLYADCLRWQAKCHTELLPEGASVDDMLAKLNLHNSGSGGKINSSGDGRAGANAAAGEGESTGEGEEDDGNGREEDECGKKKKGGPKGIKKKETASGGKVLIMRMSRNKRKSITVVTGLDSYPDLKLKDVAKALGKAFASGASVSDTGSGGKEIVIQGDVIDSLAIMLEEKYKV 201 I VCSIPPEYCIFNPPDLYADCLRWQAKCHTELLPEGASVDDMLAKLNLHNSGSGGKINSSGDGRAG NAAAGEGESTGEGEEDDGNGREEDECGKKKKGGPKGIKKKET SGGKVLIMRMSRNKRKSITVVTGLDSYPDLKLKDVAKALGKAFASGASVSDTGSGGKEIVIQGDVIDSLAIMLEEKYKV Sbjct: 41 ILYCGVCSIPPEYCIFNPPDLYADCLRWQAKCHTELLPEGASVDDMLAKLNLHNSGSGGKINSSGDGRAGVNAAAGEGESTGEGEEDDGNGREEDECGKKKKGGPKGIKKKETTSGGKVLIMRMSRNKRKSITVVTGLDSYPDLKLKDVAKALGKAFASGASVSDTGSGGKEIVIQGDVIDSLAIMLEEKYKV 233
BLAST of EWM28669.1 vs. NCBI_GenBank
Match: gi|299471536|emb|CBN80022.1| (RNA binding protein Tma22, putative [Ectocarpus siliculosus]) HSP 1 Score: 96.2857 bits (238), Expect = 9.400e-21 Identity = 70/197 (35.53%), Postives = 96/197 (48.73%), Query Frame = 0 Query: 6 PYAIFSFAVCSIPPEYCIFNPPDLYADCLRW-QAKCHTELLPEGASVDDMLAKLNLHNSGSGGKINSSGDGRAGANAAAGEGESTGEGEEDDGNGREEDECGKKKKGGPKGIKKKETASGGKVLIMRMSRNKRKSITVVTGLDSYPDLKLKDVAKALGKAFASGASVSDTGSGGKEIVIQGDVIDSLAIMLEEKYKV 201 P IF VC +PPEYC F C W +A C PE +V++ +A L + G + G +G+ R GKK GG + +V+I R+SRN+RK +TVV GLD++PD+K+KD AK +GK FA G+SVS SG +E+VIQGDV+ L LE + Sbjct: 33 PLTIFYCGVCGLPPEYCEFG--STAEACRAWAEANC-----PEVLAVEEGIAGLEVQGDAGGEAAGGAERAAGGEEEPKKKGKKV----------RIAKPGGKKAAGGEQ-----------RVVIGRLSRNRRKFVTVVGGLDTFPDVKIKDAAKKIGKQFACGSSVSKAPSGAEEVVIQGDVLMDLPGFLETTLNI 201
BLAST of EWM28669.1 vs. NCBI_GenBank
Match: gi|821078629|gb|KKY32279.1| (putative translation machinery-associated protein 22 [Diaporthe ampelina]) HSP 1 Score: 95.1301 bits (235), Expect = 1.653e-20 Identity = 65/187 (34.76%), Postives = 89/187 (47.59%), Query Frame = 0 Query: 14 VCSIPPEYCIFNPPDLYADCLRWQAKCHTELLPEGASVDDMLAKLNLHNSGSGGKINSSGDGRAGANAAAGEGESTGEGEEDDGNGREEDECGKKKKGGPKGIKKKETASGGKVLIMRMSRNKRKSITVVTGLDSYPDLKLKDVAKALGKAFASGASVSDTGSGGKEIVIQGDVIDSLAIMLEEKYK 200 VC++PPEYC + C W K H +L S + + A S ++ RA E+D K K K+ + + V I R+ RNKRK +T V+GL+++ DL LK VAK GK FA+G+SV+ T SGG+EIV+QGDV D + L EKYK Sbjct: 21 VCTLPPEYCEYG--GTVKKCQEWLQKNHNDLYETIWSPEALAA--------STANLSVEAQKRA-----------------------EKDALKKTAKAEAAEQKQADKRAASVVTIKRIERNKRKYVTAVSGLEAF-DLDLKKVAKEFGKKFATGSSVTKTPSGGEEIVVQGDVSDEIEDFLNEKYK 173
BLAST of EWM28669.1 vs. NCBI_GenBank
Match: gi|1092157774|emb|CZT07194.1| (related to density-regulated protein, translation initiation factor [Rhynchosporium agropyri] >gi|1092180014|emb|CZS89247.1| related to density-regulated protein, translation initiation factor [Rhynchosporium commune]) HSP 1 Score: 92.0485 bits (227), Expect = 2.806e-19 Identity = 70/195 (35.90%), Postives = 92/195 (47.18%), Query Frame = 0 Query: 14 VCSIPPEYCIFNPPDLYADCLRWQAKCHTELLPEGASVDDMLAKLNLHNSGSGGKINSSGDGRAGANAAAGEGESTGEGEEDDGNGREEDECGKKKKGGPKGIKKKETASGGKVLIMRMSRNKRKSITVVTGLDSYPDLKLKDVAKALGKAFASGASVSDTGSGGKEIVIQGDVIDSLAIMLEEKYKVGTRDKYN 208 VCS+PPEYC F KC L E DDM +L ++ + + S D + A E+D K K ++ T KV+I R+ RNKRK +T VTGL+++ DL K VAK GK FA+G+SV+ SGG+EIV+QGDV D + L EKY V D Y Sbjct: 20 VCSLPPEYCEFGGT---------VKKCQEWLKDED---DDMYERLWSDDALAAATSSLSVDAQKRA---------------------EKDAHKKALKAEAAEARQAATIKSSKVIIKRVERNKRKFVTTVTGLEAF-DLDNKKVAKEFGKKFATGSSVTKLASGGEEIVVQGDVSDEIEEFLMEKYPVIPEDNYE 180
BLAST of EWM28669.1 vs. NCBI_GenBank
Match: gi|1050848975|gb|OCW37788.1| (hypothetical protein DHEL01_13347 [Diaporthe helianthi]) HSP 1 Score: 90.8929 bits (224), Expect = 8.174e-19 Identity = 63/187 (33.69%), Postives = 89/187 (47.59%), Query Frame = 0 Query: 14 VCSIPPEYCIFNPPDLYADCLRWQAKCHTELLPEGASVDDMLAKLNLHNSGSGGKINSSGDGRAGANAAAGEGESTGEGEEDDGNGREEDECGKKKKGGPKGIKKKETASGGKVLIMRMSRNKRKSITVVTGLDSYPDLKLKDVAKALGKAFASGASVSDTGSGGKEIVIQGDVIDSLAIMLEEKYK 200 VC++PPEYC + C W K H +L S + + A S ++ RA E+D K K K+ + + V I R+ RNKRK +T V GL+++ DL+LK VAK GK FA+G+SV+ T SGG+EIV+QGDV + + L +KYK Sbjct: 21 VCTLPPEYCEYG--GTVKKCQEWLQKKHKDLYEAIWSAEALAA--------STANLSVEAQKRA-----------------------EKDAQKKTAKAEAAEQKQADKRAASVVTIKRIERNKRKYVTSVAGLEAF-DLELKKVAKEFGKKFATGSSVTKTPSGGEEIVVQGDVSNEIEEFLTDKYK 173
BLAST of EWM28669.1 vs. NCBI_GenBank
Match: gi|1092148227|emb|CZT45790.1| (related to density-regulated protein, translation initiation factor [Rhynchosporium secalis]) HSP 1 Score: 89.3521 bits (220), Expect = 3.155e-18 Identity = 69/195 (35.38%), Postives = 91/195 (46.67%), Query Frame = 0 Query: 14 VCSIPPEYCIFNPPDLYADCLRWQAKCHTELLPEGASVDDMLAKLNLHNSGSGGKINSSGDGRAGANAAAGEGESTGEGEEDDGNGREEDECGKKKKGGPKGIKKKETASGGKVLIMRMSRNKRKSITVVTGLDSYPDLKLKDVAKALGKAFASGASVSDTGSGGKEIVIQGDVIDSLAIMLEEKYKVGTRDKYN 208 VCS+PPEYC F KC L E DM +L ++ + + S D + A E+D K K ++ T KV+I R+ RNKRK +T VTGL+++ DL K VAK GK FA+G+SV+ SGG+EIV+QGDV D + L EKY V D Y Sbjct: 20 VCSLPPEYCEFGGT---------VKKCQEWLKDEDG---DMYERLWSDDALAAATSSLSVDAQKRA---------------------EKDAHKKALKAEAAEARQAATIKSSKVIIKRVERNKRKFVTTVTGLEAF-DLDNKKVAKEFGKKFATGSSVTKLASGGEEIVVQGDVSDEIEEFLMEKYPVIPEDNYE 180
BLAST of EWM28669.1 vs. NCBI_GenBank
Match: gi|972139661|gb|KUI65910.1| (Translation machinery-associated protein 22 [Valsa mali]) HSP 1 Score: 88.5817 bits (218), Expect = 5.090e-18 Identity = 65/187 (34.76%), Postives = 91/187 (48.66%), Query Frame = 0 Query: 14 VCSIPPEYCIFNPPDLYADCLRWQAKCHTELLPEGASVDDMLAKLNLHNSGSGGKINSSGDGRAGANAAAGEGESTGEGEEDDGNGREEDECGKKKKGGPKGIKKKETASGGKVLIMRMSRNKRKSITVVTGLDSYPDLKLKDVAKALGKAFASGASVSDTGSGGKEIVIQGDVIDSLAIMLEEKYK 200 VC++PPEYC + C W K H +L S D + A S ++ RA E+D K K K+ + + V+I R+ RNKRK +T V+GL+++ DL+LK V+K GK FA+G+SV+ T SGG+EIV+QGDV D + L EKYK Sbjct: 21 VCTLPPEYCEYG--GTVKKCQEWLEKKHPDLYERIWSPDALAA--------STANLSVEAQKRA-----------------------EKDAIKKTAKAEAAAAKEADKRATSTVIIKRIERNKRKYVTAVSGLEAF-DLELKKVSKEFGKKFATGSSVTKTPSGGEEIVVQGDVSDEIEEFLLEKYK 173
BLAST of EWM28669.1 vs. NCBI_GenBank
Match: gi|1072983826|ref|XP_018442468.1| (PREDICTED: translation machinery-associated protein 22 [Raphanus sativus]) HSP 1 Score: 88.5817 bits (218), Expect = 5.401e-18 Identity = 66/195 (33.85%), Postives = 100/195 (51.28%), Query Frame = 0 Query: 6 PYAIFSFAVCSIPPEYCIFNPPDLYADCLRWQAKCHTELLPEGASVDDMLAKLNLHNSGS-GGKINSSGDGRAGANAAAGEGESTGEGEEDDGNGREEDECGKKKKGGPKGIKKKETASGGKVLIMRMSRNKRKSITVVTGLDSYPDLKLKDVAKALGKAFASGASVSDTGSGGKEIVIQGDVIDSLAIMLEEKY 199 P + VCS+P EYC F P + C W + +L P D+L + N + + K+ S G GA+ A +STG G + E GK+ GG +KKKE +V+I ++ RNKRK IT+V GL+ + +KL D +K LGK FA+GASV + ++I +QGD+I + + + + Sbjct: 7 PAKVLYCGVCSLPAEYCEFGPD--FGRCKPWLVQNAPDLYP------DLLKEANEKAADNVSDKLQSVGISSGGADGAPSSSQSTG-------GGTSKKEEGKRLPGGK--LKKKERQ---EVIIEKVVRNKRKCITIVKGLELF-GIKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIIYDIVEFITDTW 180
BLAST of EWM28669.1 vs. NCBI_GenBank
Match: gi|972125166|gb|KUI54084.1| (Translation machinery-associated protein 22 [Valsa mali var. pyri]) HSP 1 Score: 88.5817 bits (218), Expect = 5.831e-18 Identity = 65/187 (34.76%), Postives = 91/187 (48.66%), Query Frame = 0 Query: 14 VCSIPPEYCIFNPPDLYADCLRWQAKCHTELLPEGASVDDMLAKLNLHNSGSGGKINSSGDGRAGANAAAGEGESTGEGEEDDGNGREEDECGKKKKGGPKGIKKKETASGGKVLIMRMSRNKRKSITVVTGLDSYPDLKLKDVAKALGKAFASGASVSDTGSGGKEIVIQGDVIDSLAIMLEEKYK 200 VC++PPEYC + C W K H +L S D + A S ++ RA E+D K K K+ + + V+I R+ RNKRK +T V+GL+++ DL+LK V+K GK FA+G+SV+ T SGG+EIV+QGDV D + L EKYK Sbjct: 21 VCTLPPEYCEYG--GTVKKCQEWLEKKHPDLYERIWSPDALAA--------STANLSVEAQKRA-----------------------EKDAIKKTAKAEAAAAKEADKRATSTVIIKRIERNKRKYVTAVSGLEAF-DLELKKVSKEFGKKFATGSSVTKTPSGGEEIVVQGDVSDEIEEFLLEKYK 173 The following BLAST results are available for this feature:
BLAST of EWM28669.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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