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Properties
| Property Name | Value |
|---|
| Product | poc1 centriolar protein |
| Orig transcript id | gnl|cribi|Naga_100013g18.9779.mrna |
| Orig protein id | gnl|cribi|Naga_100013g18.9779 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:517687..519514 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna199 ID=rna199|Name=rna199|organism=Nannochloropsis gaditana|type=mRNA|length=1824bp
CCCCAAAAAAGGACAACCTATATTTCTTCGGCACGGCCACTCAATTCATC
AGAGGCTCGTCCCACACGCAGGTGTGCCAGCGCCGCTTGCATTGGCTTGG
AGGAAAAAAGAAGGGGAGGGGCAGCCTATAAATTTTATGGCATACAGGGA
TACCAGCACTTCCGCAAGCTTGTGCTGAACTTTGTACACAAGTCAAAAAG
CTCCGACACCAGACCAGGAAATAGAAAACAAGGAAGAAGATATGTATTCA
GCATCCGGCACAATTTATCTACTAAAATTTCGATAGGTCGAAGCAAAGTT
CAAGATAAATGAGTGTAGTCACCATTCTTGTTGTCTACATGACCCTCATC
GCATTTTTGATCTGGGTCTGCGTTCTTGCGGATCCCAACTCTGACACACT
AGGTGGAAGGCTCAACGTCTTACTCACGGAGGAGATCCCCACTCGCATCA
CATTCAATCTTCGCCGCCGCCTCCCCTCGAAAGTCTTCGACGCCCTCGCA
AAGGCCTATGACTACATCGTCCGTCAACGCAACCCCATCCTGCAATGCCT
ATACCTGCTTCTGTTCCTGGGCTCTTTCGCGACCTACTTGTACGAGGGAT
GGGGTCGCATACCATTGGGGGACCTCGCCCTTTCCGTCGCCCTTGTCCTG
GCGTGCCTCGCGTCTTTCGTTGTCGCCTGCTCGGTGCCTGCCGGGACCAT
CTCGCCCTCCACATGGGAGCGATACGACAACTACAAGCCAGACAACGTCA
TTTACGTCGCAGGGAGAGTCTGCCCCACATGCGACGTCGTGAAACTGGCA
CGGTCGAAGCATTGCCGCTTGTGTGGAGTGTGCCAGTCTCGCTTCGACCA
TCACTGCGGCTGGCTGAACCAGTGCGTGGGTGAGGTCAACTACCGGCATT
TCCTCTTCTTCCTCGCCCTTCACAGCTGCACATTTCTGTACGGCAGTTCT
CGACTTTGGGGGATCCTCCGTAGGGAGATGATTAAAAACAAGCTGTGGGA
TGCGACCTTCTACAGCCCTTCGTCCGGGCAGACGGTCGGGTCGAGTCCCC
TTGTCGTGTGTCAGTACCTTGTAGTGCATGAGGGCGCGGTCTGCGGGGTC
CTTGCCCTCGCCTTTGTCATGGCTATTGTCCTGGCAGGGTTTTTGCTTTA
CCACCTGTGGCTTGCGGGGCAGAACACGACAACGAACGAAACTTTCAAGT
GGGCGGAGGTCCGATTGAAAGTGAAAATTGAGCGAAGCCAAGCGCGGAGG
GCTCACGAAGCCTCAGGTGGCGCTCTTCCGTTACGCCGCATCGCCGACCC
TGTCAACTCCTACAACATCTCACTTTACGAAAACCTCATGGAGGTGCTTT
TTCCGCGGAGCGAAAGGCGGGCCCAAAATTCGACGGGACGAAAGGCCGTA
TCGCGGGTAGCGACAGAGTCAGAAAAGCTCTCCACGGAGGCCAGGGAAAA
GATCGAGTAAAAAGAAATTATTACAGCAAATATGCCCCGCGGTTGTCTTG
ACAGATAAGCGCAGCTTCGGCGCGGATCACTAGATTGTGCATGCTCTTCG
CTTCTTCTCAGTCTGCTGACGTGCGGGGTGGGTGAGACAGTGACAAGAGC
TGCCAGGGAGGCGAGAGACCTTCAATCAAGTTTTCTGTGGAAGGCTTGTG
ATGCAATGCTCTCTTATTTCCACATATGGTGAGGAGAGAGGAAATCATGA
GAAATGACACCACAATAAGCACAACTTAACTCGGCCCTCGTGTGTGACAC
ATTGGCCGCTACTTTTGTATATATTTACATCACCTCGAATTTAATGAACA
ATCGCTATGTTACAGTATCAAATC back to topprotein sequence of rna199 >rna199-protein ID=rna199-protein|Name=rna199|organism=Nannochloropsis gaditana|type=polypeptide|length=575bp
MVITSSSLLGADELVTPELERTFRGHRAGVLSLAFSPTIKQLASGVEDGT
VHVWHFKPEQRAFRYPGHKGPVHSVQYSPSGRYLASGGGDAIVKLWEPSA
RGRALVLKNHSRAVRSVAFSADSRLLLTGSDDKTVKIISLHDRRFRGSLQ
GHSHWVRSATFSPDALMAASGSEDRTVRLWDVQNRECLGILMEAKDAVCA
VAFHPDGACLAAGGRDRCLRIWDTRTQDLVQQYAPAHAEGINSVAFHSSG
NFVLTSSQDGTLKVWDVREARLLFTVHGHRGRIAQAAFSPDADSSLFASA
GMQDRTVMVWRSNLAPYNRVRTTVTAKEADADWPFSSSTSPAPHARPPYI
PQRYAYAHTYEMDVPVPAYQRPSPVAGRDQYWETEEREGGQLSAFSRNRG
EPQRGEQAETSKAWQQDYVVDYHVEKPSAPPLLAELEEQETREEERARTA
VPTAAPASSFPGMHQDSSSQGRVKAQAVSGAGWQRKAREKLGVSGHCEAE
EGERDFSPTHLTRTLSLLADRMRTIEEKLEKLSLGPGVGKNDVLNGEDVP
TRAVCRQEHSDSRDSNDEVYHVIAE back to topmRNA from alignment at CM002455.1:517687..519514+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna199 ID=rna199|Name=rna199|organism=Nannochloropsis gaditana|type=mRNA|length=1828bp|location=Sequence derived from alignment at CM002455.1:517687..519514+ (Nannochloropsis gaditana)
CGTTTCGGTCCCATCGACATTCACAACACAGGTTGAAGGATCATGGTTAt
aacgtcctcctccctgctagGTGCCGATGAACTCGTGACACCAGAGTTGG
AGCGAACTTTCCGTGGTCATAGAGCTGGTGTCTTGAGCCTCGCGTTCAGT
CCCACGATCAAGCAGCTCGCTTCAGGTGTTGAGGACGGCACTGTCCATGT
CTGGCACTTCAAGCCCGAACAGCGCGCTTTCCGGTACCCGGGTCATAAAG
GACCCGTACATTCTGTGCAATATTCCCCATCGGGCCGCTATTTGgcctcg
ggagggggggatgccATCGTTAAATTATGGGAGCCATCCGCACGAGGACG
AGCCTTGGTTCTCAAAAATCATTCGCGTGCGGTGCGCTCTGTGGCATTTT
CAGCGGACAGTCGTCTATTGCTGACTGGGTCAGACGATAAGACCGTCAAA
ATCATATCGTTGCACGACCGCCGCTTTCGAGGTAGCTTGCAAGGACACAG
CCATTGGGTGCGCTCAGCCACCTTCAGCCCTGATGCCCTGATGGCGGCGT
CCGGATCCGAGGACCGTACCGTCCGCCTGTGGGACGTGCAGAACCGGGAG
TGTCTGGGCATTTTGATGGAGGCGAAAGACGCGGTGTGTGCGGTGGCCTT
CCATCCGGACGGTGCCTGTCTGGCTGCGGGGGGCCGGGATCGGTGTCTAC
GCATCTGGGATACGCGGACGCAGGATCTGGTCCAGCAATACGCGCCCGCG
CATGCAGAGGGTATCAATTCCGTGGCCTTCCACTCGTCGGGCAACTTTGT
CCTGACATCTTCTCAAGACGGCACCTTAAAGGTCTGGGACGTGCGGGAAG
CTCGCTTGCTATTCACGGTGCACGGGCATCGGGGACGCATCGCTCAAGCC
GCCTTCAGTCCGGACGCCGACAGCTCCCTATTCGCCTCTGCGGGGATGCA
AGACAGGACGGTCATGGTTTGGCGTTCGAATCTAGCGCCCTACAACCGGG
TCCGCACCACGGTGACCGCAAAAGAGGCCGACGCCGATtggcccttttcc
tcctccacatctcCCGCCCCTCACGCTCGCCCGCCCTACATACCTCAACG
CTACGCTTATGCCCATACGTATGAAATGGACGTGCCCGTGCCTGCGTATC
AGCGACCATCTCCGGTCGCAGGAAGAGATCAATATTGGGAaacagaggag
agggaggggggacagCTCTCCGCATTCAGTAGAAATCGAGGAGAGCCTCA
GAGGGGAGAGCAGGCAGAGACATCGAAAGCCTGGCAGCAGGACTATGTTG
TCGATTACCACGTTGAAAAACCCTCGGCGCCCCCTTTGCTCGcggagttg
gaggagcaggagaccagagaagaggagagggcaaggactGCGGTCCCTAC
GGCCGCCCCAGCATCATCTTTTCCTGGAATGCATCAAGACAGCAGTTCAC
AAGGCCGAGTCAAAGCGCAGGCAGTCTCTGGGGCCGGGTGGCAACGGAAA
GCAAGGGAGAAACTAGGGGTATCAGGGCACTGCGAagctgaggaagggga
gagggatttCAGCCCGACGCACTTAACCCGGACACTCTCGCTTTTGGCGG
ACAGGATGCGGACGATCGAGGAGAAGCTCGAGAAGTTAAGCCTGGGACCC
GGCGTCGGGAAAAATGACGTGCTAAACGGCGAAGACGTGCCAACGAGGGC
GGTCTGCCGTCAGGAACACAGCGATTCCCGGGACAGTAACGACGAGGTGT
ACCACGTTATCGCGGAATGAGGTAACTTGACCTTCAAAAATTAAGTCAAA
AGAATTATGTTTATACGTCTGCAAGACC back to topCoding sequence (CDS) from alignment at CM002455.1:517687..519514+ >rna199 ID=rna199|Name=rna199|organism=Nannochloropsis gaditana|type=CDS|length=1728bp|location=Sequence derived from alignment at CM002455.1:517687..519514+ (Nannochloropsis gaditana)
ATGGTTAtaacgtcctcctccctgctagGTGCCGATGAACTCGTGACACC
AGAGTTGGAGCGAACTTTCCGTGGTCATAGAGCTGGTGTCTTGAGCCTCG
CGTTCAGTCCCACGATCAAGCAGCTCGCTTCAGGTGTTGAGGACGGCACT
GTCCATGTCTGGCACTTCAAGCCCGAACAGCGCGCTTTCCGGTACCCGGG
TCATAAAGGACCCGTACATTCTGTGCAATATTCCCCATCGGGCCGCTATT
TGgcctcgggagggggggatgccATCGTTAAATTATGGGAGCCATCCGCA
CGAGGACGAGCCTTGGTTCTCAAAAATCATTCGCGTGCGGTGCGCTCTGT
GGCATTTTCAGCGGACAGTCGTCTATTGCTGACTGGGTCAGACGATAAGA
CCGTCAAAATCATATCGTTGCACGACCGCCGCTTTCGAGGTAGCTTGCAA
GGACACAGCCATTGGGTGCGCTCAGCCACCTTCAGCCCTGATGCCCTGAT
GGCGGCGTCCGGATCCGAGGACCGTACCGTCCGCCTGTGGGACGTGCAGA
ACCGGGAGTGTCTGGGCATTTTGATGGAGGCGAAAGACGCGGTGTGTGCG
GTGGCCTTCCATCCGGACGGTGCCTGTCTGGCTGCGGGGGGCCGGGATCG
GTGTCTACGCATCTGGGATACGCGGACGCAGGATCTGGTCCAGCAATACG
CGCCCGCGCATGCAGAGGGTATCAATTCCGTGGCCTTCCACTCGTCGGGC
AACTTTGTCCTGACATCTTCTCAAGACGGCACCTTAAAGGTCTGGGACGT
GCGGGAAGCTCGCTTGCTATTCACGGTGCACGGGCATCGGGGACGCATCG
CTCAAGCCGCCTTCAGTCCGGACGCCGACAGCTCCCTATTCGCCTCTGCG
GGGATGCAAGACAGGACGGTCATGGTTTGGCGTTCGAATCTAGCGCCCTA
CAACCGGGTCCGCACCACGGTGACCGCAAAAGAGGCCGACGCCGATtggc
ccttttcctcctccacatctcCCGCCCCTCACGCTCGCCCGCCCTACATA
CCTCAACGCTACGCTTATGCCCATACGTATGAAATGGACGTGCCCGTGCC
TGCGTATCAGCGACCATCTCCGGTCGCAGGAAGAGATCAATATTGGGAaa
cagaggagagggaggggggacagCTCTCCGCATTCAGTAGAAATCGAGGA
GAGCCTCAGAGGGGAGAGCAGGCAGAGACATCGAAAGCCTGGCAGCAGGA
CTATGTTGTCGATTACCACGTTGAAAAACCCTCGGCGCCCCCTTTGCTCG
cggagttggaggagcaggagaccagagaagaggagagggcaaggactGCG
GTCCCTACGGCCGCCCCAGCATCATCTTTTCCTGGAATGCATCAAGACAG
CAGTTCACAAGGCCGAGTCAAAGCGCAGGCAGTCTCTGGGGCCGGGTGGC
AACGGAAAGCAAGGGAGAAACTAGGGGTATCAGGGCACTGCGAagctgag
gaaggggagagggatttCAGCCCGACGCACTTAACCCGGACACTCTCGCT
TTTGGCGGACAGGATGCGGACGATCGAGGAGAAGCTCGAGAAGTTAAGCC
TGGGACCCGGCGTCGGGAAAAATGACGTGCTAAACGGCGAAGACGTGCCA
ACGAGGGCGGTCTGCCGTCAGGAACACAGCGATTCCCGGGACAGTAACGA
CGAGGTGTACCACGTTATCGCGGAATGA back to top
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