EWM30491.1, cds199 (CDS) Nannochloropsis gaditana

Overview
NameEWM30491.1
Unique Namecds199
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:517729..519456 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30491.1
Productpoc1 centriolar protein
Orig transcript idgnl|cribi|Naga_100013g18.9779.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:517729..519456 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR015943WD40/YVTN_repeat-like_dom
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
Homology
BLAST of EWM30491.1 vs. NCBI_GenBank
Match: gi|585113155|gb|EWM30491.1| (poc1 centriolar protein [Nannochloropsis gaditana])

HSP 1 Score: 1182.93 bits (3059), Expect = 0.000e+0
Identity = 575/575 (100.00%), Postives = 575/575 (100.00%), Query Frame = 0
Query:    1 MVITSSSLLGADELVTPELERTFRGHRAGVLSLAFSPTIKQLASGVEDGTVHVWHFKPEQRAFRYPGHKGPVHSVQYSPSGRYLASGGGDAIVKLWEPSARGRALVLKNHSRAVRSVAFSADSRLLLTGSDDKTVKIISLHDRRFRGSLQGHSHWVRSATFSPDALMAASGSEDRTVRLWDVQNRECLGILMEAKDAVCAVAFHPDGACLAAGGRDRCLRIWDTRTQDLVQQYAPAHAEGINSVAFHSSGNFVLTSSQDGTLKVWDVREARLLFTVHGHRGRIAQAAFSPDADSSLFASAGMQDRTVMVWRSNLAPYNRVRTTVTAKEADADWPFSSSTSPAPHARPPYIPQRYAYAHTYEMDVPVPAYQRPSPVAGRDQYWETEEREGGQLSAFSRNRGEPQRGEQAETSKAWQQDYVVDYHVEKPSAPPLLAELEEQETREEERARTAVPTAAPASSFPGMHQDSSSQGRVKAQAVSGAGWQRKAREKLGVSGHCEAEEGERDFSPTHLTRTLSLLADRMRTIEEKLEKLSLGPGVGKNDVLNGEDVPTRAVCRQEHSDSRDSNDEVYHVIAE 575
            MVITSSSLLGADELVTPELERTFRGHRAGVLSLAFSPTIKQLASGVEDGTVHVWHFKPEQRAFRYPGHKGPVHSVQYSPSGRYLASGGGDAIVKLWEPSARGRALVLKNHSRAVRSVAFSADSRLLLTGSDDKTVKIISLHDRRFRGSLQGHSHWVRSATFSPDALMAASGSEDRTVRLWDVQNRECLGILMEAKDAVCAVAFHPDGACLAAGGRDRCLRIWDTRTQDLVQQYAPAHAEGINSVAFHSSGNFVLTSSQDGTLKVWDVREARLLFTVHGHRGRIAQAAFSPDADSSLFASAGMQDRTVMVWRSNLAPYNRVRTTVTAKEADADWPFSSSTSPAPHARPPYIPQRYAYAHTYEMDVPVPAYQRPSPVAGRDQYWETEEREGGQLSAFSRNRGEPQRGEQAETSKAWQQDYVVDYHVEKPSAPPLLAELEEQETREEERARTAVPTAAPASSFPGMHQDSSSQGRVKAQAVSGAGWQRKAREKLGVSGHCEAEEGERDFSPTHLTRTLSLLADRMRTIEEKLEKLSLGPGVGKNDVLNGEDVPTRAVCRQEHSDSRDSNDEVYHVIAE
Sbjct:    1 MVITSSSLLGADELVTPELERTFRGHRAGVLSLAFSPTIKQLASGVEDGTVHVWHFKPEQRAFRYPGHKGPVHSVQYSPSGRYLASGGGDAIVKLWEPSARGRALVLKNHSRAVRSVAFSADSRLLLTGSDDKTVKIISLHDRRFRGSLQGHSHWVRSATFSPDALMAASGSEDRTVRLWDVQNRECLGILMEAKDAVCAVAFHPDGACLAAGGRDRCLRIWDTRTQDLVQQYAPAHAEGINSVAFHSSGNFVLTSSQDGTLKVWDVREARLLFTVHGHRGRIAQAAFSPDADSSLFASAGMQDRTVMVWRSNLAPYNRVRTTVTAKEADADWPFSSSTSPAPHARPPYIPQRYAYAHTYEMDVPVPAYQRPSPVAGRDQYWETEEREGGQLSAFSRNRGEPQRGEQAETSKAWQQDYVVDYHVEKPSAPPLLAELEEQETREEERARTAVPTAAPASSFPGMHQDSSSQGRVKAQAVSGAGWQRKAREKLGVSGHCEAEEGERDFSPTHLTRTLSLLADRMRTIEEKLEKLSLGPGVGKNDVLNGEDVPTRAVCRQEHSDSRDSNDEVYHVIAE 575          
BLAST of EWM30491.1 vs. NCBI_GenBank
Match: gi|813170533|ref|XP_012204022.1| (hypothetical protein SPRG_20731 [Saprolegnia parasitica CBS 223.65] >gi|641531248|gb|KDO25331.1| hypothetical protein SPRG_20731 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 320.472 bits (820), Expect = 7.326e-100
Identity = 155/298 (52.01%), Postives = 203/298 (68.12%), Query Frame = 0
Query:   17 PELERTFRGHRAGVLSLAFSPTIKQLASGVEDGTVHVWHFKPEQRAFRYPGHKGPVHSVQYSPSGRYLASGGGDAIVKLWEPSARGRALVLKNHSRAVRSVAFSADSRLLLTGSDDKTVKIISLHDRRFRGSLQGHSHWVRSATFSPDALMAASGSEDRTVRLWDVQNRECLGILMEAKDAVCAVAFHPDGACLAAGGRDRCLRIWDTRTQDLVQQYAPAHAEGINSVAFHSSGNFVLTSSQDGTLKVWDVREARLLFTVHGHRGRIAQAAFSPDADSSLFASAGMQDRTVMVWRSNL 314
            P L+RTFRGH++GV +LA+ P  +QLASG  D +V VW+FKP+ RAFR+ GHKGPV  VQ++PSG  LASG  D  V+LW P+ +G +  LK H   VRSVAFS DS  LLT SDDK++K+ SL  RRF  S  GHS+WVRSA FSPDA +  SGS+D+TV+LWD   R C+    +    + AV FHPDG  + A   D  + +WD R+Q L+Q Y PAH   +  + FH +G + L++S DGT+K+WD+RE  LL+T+HGH G +  AAFSPD  S+  AS G+ D  VMVW ++L
Sbjct:    3 PSLQRTFRGHKSGVAALAYGPQARQLASGAMDCSVMVWNFKPQVRAFRFLGHKGPVFDVQFAPSGELLASGSQDRTVRLWTPTVKGESHTLKGHVGGVRSVAFSYDSTELLTASDDKSIKMWSLPTRRFVCSWNGHSNWVRSARFSPDARLLISGSDDKTVKLWDKATRNCITTFYDHSGIINAVRFHPDGTTVGACSYDHSMNLWDIRSQKLIQHY-PAHEGNVTGLDFHPNGYYCLSTSVDGTIKLWDIREGHLLYTMHGHTGAVNAAAFSPDGKST--ASGGV-DALVMVWDTDL 296          

HSP 2 Score: 85.8853 bits (211), Expect = 4.167e-14
Identity = 53/169 (31.36%), Postives = 83/169 (49.11%), Query Frame = 0
Query:  142 DRRFRGSLQGHSHWVRSATFSPDALMAASGSEDRTVRLWDVQNRECLGILMEAKDAVCAVAFHPDGACLAAGGRDRCLRIWDTRTQDLVQQYAPAHAEGINSVAFHSSGNFVLTSSQDGTLKVWDVREARLLFTVHGHRGRIAQAAFSPDADSSLFASAGMQDRTVMVW 310
            D   + + +GH   V +  + P A   ASG+ D +V +W+ + +      +  K  V  V F P G  LA+G +DR +R+W T T          H  G+ SVAF      +LT+S D ++K+W +   R + + +GH   +  A FSPDA       +G  D+TV +W
Sbjct:    2 DPSLQRTFRGHKSGVAALAYGPQARQLASGAMDCSVMVWNFKPQVRAFRFLGHKGPVFDVQFAPSGELLASGSQDRTVRLW-TPTVKGESHTLKGHVGGVRSVAFSYDSTELLTASDDKSIKMWSLPTRRFVCSWNGHSNWVRSARFSPDAR---LLISGSDDKTVKLW 166          
BLAST of EWM30491.1 vs. NCBI_GenBank
Match: gi|669171427|ref|XP_008621062.1| (hypothetical protein SDRG_16622 [Saprolegnia diclina VS20] >gi|530727256|gb|EQC25498.1| hypothetical protein SDRG_16622 [Saprolegnia diclina VS20])

HSP 1 Score: 320.472 bits (820), Expect = 2.267e-99
Identity = 155/298 (52.01%), Postives = 203/298 (68.12%), Query Frame = 0
Query:   17 PELERTFRGHRAGVLSLAFSPTIKQLASGVEDGTVHVWHFKPEQRAFRYPGHKGPVHSVQYSPSGRYLASGGGDAIVKLWEPSARGRALVLKNHSRAVRSVAFSADSRLLLTGSDDKTVKIISLHDRRFRGSLQGHSHWVRSATFSPDALMAASGSEDRTVRLWDVQNRECLGILMEAKDAVCAVAFHPDGACLAAGGRDRCLRIWDTRTQDLVQQYAPAHAEGINSVAFHSSGNFVLTSSQDGTLKVWDVREARLLFTVHGHRGRIAQAAFSPDADSSLFASAGMQDRTVMVWRSNL 314
            P L+RTFRGH++GV +LA+ P  +QLASG  D +V VW+FKP+ RAFR+ GHKGPV  VQ++PSG  LASG  D  V+LW P+ +G +  LK H   VRSVAFS DS  LLT SDDK++K+ SL  RRF  S  GHS+WVRSA FSPDA +  SGS+D+TV+LWD   R C+    +    + AV FHPDG  + A   D  + +WD R+Q L+Q Y PAH   + S+ FH +G + L++S DGT+K+WD+RE  LL+T+HGH G +  AAFSPD   +  AS G+ D  VMVW ++L
Sbjct:    3 PSLQRTFRGHKSGVAALAYGPQARQLASGAMDCSVMVWNFKPQVRAFRFLGHKGPVFDVQFAPSGELLASGSQDRTVRLWTPTVKGESHTLKGHVGGVRSVAFSYDSTELLTASDDKSIKMWSLPTRRFVCSWNGHSNWVRSARFSPDARLLISGSDDKTVKLWDKATRNCITTFYDHSGIINAVRFHPDGTTVGACSYDHSMNLWDIRSQKLIQHY-PAHEGNVTSLDFHPNGYYCLSTSVDGTIKLWDIREGHLLYTMHGHTGAVNAAAFSPDGKCT--ASGGV-DALVMVWDTDL 296          

HSP 2 Score: 84.7297 bits (208), Expect = 1.116e-13
Identity = 53/169 (31.36%), Postives = 83/169 (49.11%), Query Frame = 0
Query:  142 DRRFRGSLQGHSHWVRSATFSPDALMAASGSEDRTVRLWDVQNRECLGILMEAKDAVCAVAFHPDGACLAAGGRDRCLRIWDTRTQDLVQQYAPAHAEGINSVAFHSSGNFVLTSSQDGTLKVWDVREARLLFTVHGHRGRIAQAAFSPDADSSLFASAGMQDRTVMVW 310
            D   + + +GH   V +  + P A   ASG+ D +V +W+ + +      +  K  V  V F P G  LA+G +DR +R+W T T          H  G+ SVAF      +LT+S D ++K+W +   R + + +GH   +  A FSPDA       +G  D+TV +W
Sbjct:    2 DPSLQRTFRGHKSGVAALAYGPQARQLASGAMDCSVMVWNFKPQVRAFRFLGHKGPVFDVQFAPSGELLASGSQDRTVRLW-TPTVKGESHTLKGHVGGVRSVAFSYDSTELLTASDDKSIKMWSLPTRRFVCSWNGHSNWVRSARFSPDAR---LLISGSDDKTVKLW 166          
BLAST of EWM30491.1 vs. NCBI_GenBank
Match: gi|922862023|gb|KOO29701.1| (poc1 centriolar protein-like a, partial [Chrysochromulina sp. CCMP291])

HSP 1 Score: 313.538 bits (802), Expect = 2.881e-99
Identity = 156/310 (50.32%), Postives = 206/310 (66.45%), Query Frame = 0
Query:    8 LLGADELV-TPELERTFRGHRAGVLSLAFSPTIKQLASGVEDGTVHVWHFKPEQRAFRYPGHKGPVHSVQYSPSGRYLASGGGDAIVKLWEPSARGRALVLKNHSRAVRSVAFSADSRLLLTGSDDKTVKIISLHDRRFRGSLQGHSHWVRSATFSPDALMAASGSEDRTVRLWDVQNRECLGILMEAKDAVCAVAFHPDGACLAAGGRDRCLRIWDTRTQDLVQQYAPAHAEGINSVAFHSSGNFVLTSSQDGTLKVWDVREARLLFTVHGHRGRIAQAAFSPDADSSLFASAGMQDRTVMVWRSNLAP 316
            + GAD    TP LER+FRGH+  + S+ F+P +KQL SG  D  V VW+F+ + RAFR+ GHK PV SV  SPSG  +AS   D  V+LW P+ +G + V+K H   VRSVAFSAD + L + SDDKT+K+ +L  +RF  SL GHS+WVRSA FSPD  +  S S+D+T++LWD +   C+    +  D V A AF+PD  C+A+   DR  ++WD RTQ L+Q Y  AH E +  ++FHSSG+++LTSS D TLKVWD+ E RL  T+HGH G +   AFSPD D   FAS+G+ D   MVWRSN+ P
Sbjct:    1 MTGADLTADTPSLERSFRGHKDAISSVCFNPNMKQLISGGHDSCVMVWNFRLQLRAFRFVGHKAPVLSVAASPSGDLIASASKDRTVRLWLPTVKGESTVIKAHMATVRSVAFSADGQSLASASDDKTIKVWALPGQRFNYSLAGHSNWVRSAKFSPDGRLLLSCSDDKTLKLWDSRTHGCVRTFYDHTDVVNAAAFNPDATCIASASSDRTAKLWDLRTQQLLQHY-DAHDESVTDLSFHSSGSYLLTSSLDATLKVWDLVEGRLFCTLHGHEGGVNACAFSPDGD--FFASSGV-DMQAMVWRSNIGP 306          
BLAST of EWM30491.1 vs. NCBI_GenBank
Match: gi|971515274|dbj|GAQ82916.1| (putative WD-40 repeat family protein [Klebsormidium nitens])

HSP 1 Score: 313.153 bits (801), Expect = 5.143e-97
Identity = 145/298 (48.66%), Postives = 200/298 (67.11%), Query Frame = 0
Query:   17 PELERTFRGHRAGVLSLAFSPTIKQLASGVEDGTVHVWHFKPEQRAFRYPGHKGPVHSVQYSPSGRYLASGGGDAIVKLWEPSARGRALVLKNHSRAVRSVAFSADSRLLLTGSDDKTVKIISLHDRRFRGSLQGHSHWVRSATFSPDALMAASGSEDRTVRLWDVQNRECLGILMEAKDAVCAVAFHPDGACLAAGGRDRCLRIWDTRTQDLVQQYAPAHAEGINSVAFHSSGNFVLTSSQDGTLKVWDVREARLLFTVHGHRGRIAQAAFSPDADSSLFASAGMQDRTVMVWRSNL 314
            P LER+FRGH+  V S+ F+P +KQ+ S   DG V VW+FKP+ RAF++ GHK  V +V +SP G  +ASG  D  ++LW P+  GR+ +L  H+  VRSVAFS + + L++GSDDK VK+ S+  R+F+ +L GHS+W+RSA FSPD  +A SG +D+T ++WD++ R CL    +    V +V FHPDG C+ +   D+ ++++D RT+ LVQ Y  AH   + SV FH SGNF+++SSQD TLKVWD+RE  L +T+HGH G    A FSP  D   FAS G  D  VMVWR+N 
Sbjct:   13 PALERSFRGHKDAVTSVVFNPNMKQVVSSSLDGVVMVWNFKPQLRAFKFVGHKASVFAVAFSPVGDIIASGSKDKTIRLWVPTVEGRSTILSAHTAPVRSVAFSQNGQFLISGSDDKAVKVWSMQSRKFQFTLSGHSNWIRSAQFSPDGRLAVSGGDDKTSKVWDLERRTCLQTYDDHTGNVNSVQFHPDGNCMVSCSSDKSIKVFDVRTRSLVQHYG-AHTGPVQSVDFHPSGNFLISSSQDSTLKVWDLREGHLFYTLHGHEGPSTCANFSPAGD--FFASGGA-DEQVMVWRTNF 306          

HSP 2 Score: 95.5153 bits (236), Expect = 3.091e-17
Identity = 58/175 (33.14%), Postives = 88/175 (50.29%), Query Frame = 0
Query:  148 SLQGHSHWVRSATFSPDALMAASGSEDRTVRLWDVQNRECLGILMEAKDAVCAVAFHPDGACLAAGGRDRCLRIWDTRTQDLVQQYAPAHAEGINSVAFHSSGNFVLTSSQDGTLKVWDVREARLLFTVHGHRGRIAQAAFSPDADSSLFASAGMQDRTVMVW----RSNLAPYN 318
            S +GH   V S  F+P+     S S D  V +W+ + +      +  K +V AVAF P G  +A+G +D+ +R+W   T +       AH   + SVAF  +G F+++ S D  +KVW ++  +  FT+ GH   I  A FSPD      A +G  D+T  VW    R+ L  Y+
Sbjct:   18 SFRGHKDAVTSVVFNPNMKQVVSSSLDGVVMVWNFKPQLRAFKFVGHKASVFAVAFSPVGDIIASGSKDKTIRLW-VPTVEGRSTILSAHTAPVRSVAFSQNGQFLISGSDDKAVKVWSMQSRKFQFTLSGHSNWIRSAQFSPDG---RLAVSGGDDKTSKVWDLERRTCLQTYD 188          
BLAST of EWM30491.1 vs. NCBI_GenBank
Match: gi|260809952|ref|XP_002599768.1| (hypothetical protein BRAFLDRAFT_205723 [Branchiostoma floridae] >gi|229285050|gb|EEN55780.1| hypothetical protein BRAFLDRAFT_205723, partial [Branchiostoma floridae])

HSP 1 Score: 309.686 bits (792), Expect = 1.054e-96
Identity = 147/298 (49.33%), Postives = 196/298 (65.77%), Query Frame = 0
Query:   17 PELERTFRGHRAGVLSLAFSPTIKQLASGVEDGTVHVWHFKPEQRAFRYPGHKGPVHSVQYSPSGRYLASGGGDAIVKLWEPSARGRALVLKNHSRAVRSVAFSADSRLLLTGSDDKTVKIISLHDRRFRGSLQGHSHWVRSATFSPDALMAASGSEDRTVRLWDVQNRECLGILMEAKDAVCAVAFHPDGACLAAGGRDRCLRIWDTRTQDLVQQYAPAHAEGINSVAFHSSGNFVLTSSQDGTLKVWDVREARLLFTVHGHRGRIAQAAFSPDADSSLFASAGMQDRTVMVWRSNL 314
            P LER F+GHR  V SL F+P +KQLASG  D  + VW+FKP+ RA+R+ GHK  V SV +SPSG  +AS   D  V+LW PS +G + V K H+  VRSV FS D + LLT SDDK++K+ ++H ++F+ SL  H +WVR A FSPD  M  SGS+D+TV+LWD   +EC+    E    V +VAFHP G C+AA G D  +++WD RT  L+Q Y   H   +N ++FHSSGN+++T+S D TLK+ D+ E RL +T+HGH+G     AFS   D   FAS G  D  VMVW++N 
Sbjct:    6 PTLERHFKGHRDTVTSLDFNPNMKQLASGSMDSCLMVWNFKPQMRAYRFVGHKDAVMSVVFSPSGHLVASASRDKTVRLWIPSVKGESTVFKAHTATVRSVDFSPDGQALLTASDDKSIKVWTVHRQKFQFSLNQHMNWVRCARFSPDGRMIVSGSDDKTVKLWDKNTKECVHTFFEHGGFVNSVAFHPSGTCIAAAGTDSTVKVWDIRTNRLLQHYQ-VHTAAVNGLSFHSSGNYLITASNDSTLKILDLLEGRLFYTLHGHQGPATTVAFSRAGD--FFASGG-SDEQVMVWKTNF 299          
BLAST of EWM30491.1 vs. NCBI_GenBank
Match: gi|673025568|ref|XP_008866745.1| (hypothetical protein H310_04260 [Aphanomyces invadans] >gi|574478311|gb|ETW05307.1| hypothetical protein H310_04260 [Aphanomyces invadans])

HSP 1 Score: 313.923 bits (803), Expect = 1.548e-96
Identity = 148/298 (49.66%), Postives = 199/298 (66.78%), Query Frame = 0
Query:   17 PELERTFRGHRAGVLSLAFSPTIKQLASGVEDGTVHVWHFKPEQRAFRYPGHKGPVHSVQYSPSGRYLASGGGDAIVKLWEPSARGRALVLKNHSRAVRSVAFSADSRLLLTGSDDKTVKIISLHDRRFRGSLQGHSHWVRSATFSPDALMAASGSEDRTVRLWDVQNRECLGILMEAKDAVCAVAFHPDGACLAAGGRDRCLRIWDTRTQDLVQQYAPAHAEGINSVAFHSSGNFVLTSSQDGTLKVWDVREARLLFTVHGHRGRIAQAAFSPDADSSLFASAGMQDRTVMVWRSNL 314
            P L+RTFRGH++GV  L+++P ++QLASG  D TV +W+FKP+ RAFR+ GHKGPV  VQ++PSG  LAS   D  V+LW P+ +G + ++K H+  VRSV FS DS  LLT SDDK++K+ SL  RRF  S  GHS+WVRSA FSPDA +  SGS+D+TV++WD   R CL    +    + AV FHPDG  + A   D    +WD R+  L+Q Y PAH   +  + FH SGN++ ++S DGT+K+WDVRE  LL+T+HGH G +  A FS D   S F + G  D  VM+W ++L
Sbjct:    3 PSLQRTFRGHKSGVECLSYNPNMRQLASGSLDCTVMIWNFKPQMRAFRFLGHKGPVFDVQFAPSGDLLASASQDRSVRLWIPTVKGESHMIKGHAGGVRSVDFSYDSAELLTASDDKSIKLWSLPTRRFVCSWNGHSNWVRSARFSPDARVLVSGSDDKTVKVWDKATRNCLATFFDHSGIINAVRFHPDGNTVGACSYDHTFNLWDVRSHKLIQHY-PAHDASVTCIDFHPSGNYIASTSTDGTIKLWDVREGHLLYTMHGHNGAVNCATFSSD---SKFTATGSVDALVMLWDTDL 296          

HSP 2 Score: 83.5741 bits (205), Expect = 2.453e-13
Identity = 53/169 (31.36%), Postives = 83/169 (49.11%), Query Frame = 0
Query:  142 DRRFRGSLQGHSHWVRSATFSPDALMAASGSEDRTVRLWDVQNRECLGILMEAKDAVCAVAFHPDGACLAAGGRDRCLRIWDTRTQDLVQQYAPAHAEGINSVAFHSSGNFVLTSSQDGTLKVWDVREARLLFTVHGHRGRIAQAAFSPDADSSLFASAGMQDRTVMVW 310
            D   + + +GH   V   +++P+    ASGS D TV +W+ + +      +  K  V  V F P G  LA+  +DR +R+W   T          HA G+ SV F      +LT+S D ++K+W +   R + + +GH   +  A FSPDA   +   +G  D+TV VW
Sbjct:    2 DPSLQRTFRGHKSGVECLSYNPNMRQLASGSLDCTVMIWNFKPQMRAFRFLGHKGPVFDVQFAPSGDLLASASQDRSVRLW-IPTVKGESHMIKGHAGGVRSVDFSYDSAELLTASDDKSIKLWSLPTRRFVCSWNGHSNWVRSARFSPDARVLV---SGSDDKTVKVW 166          
BLAST of EWM30491.1 vs. NCBI_GenBank
Match: gi|1126201196|ref|XP_019633941.1| (PREDICTED: POC1 centriolar protein homolog A-like isoform X2 [Branchiostoma belcheri])

HSP 1 Score: 309.686 bits (792), Expect = 4.189e-96
Identity = 147/298 (49.33%), Postives = 196/298 (65.77%), Query Frame = 0
Query:   17 PELERTFRGHRAGVLSLAFSPTIKQLASGVEDGTVHVWHFKPEQRAFRYPGHKGPVHSVQYSPSGRYLASGGGDAIVKLWEPSARGRALVLKNHSRAVRSVAFSADSRLLLTGSDDKTVKIISLHDRRFRGSLQGHSHWVRSATFSPDALMAASGSEDRTVRLWDVQNRECLGILMEAKDAVCAVAFHPDGACLAAGGRDRCLRIWDTRTQDLVQQYAPAHAEGINSVAFHSSGNFVLTSSQDGTLKVWDVREARLLFTVHGHRGRIAQAAFSPDADSSLFASAGMQDRTVMVWRSNL 314
            P LER F+GHR  V SL F+P +KQLASG  D  + VW+FKP+ RA+R+ GHK  V SV +SPSG  +AS   D  V+LW PS +G + V K H+  VRSV FS D + LLT SDDK++K+ ++H ++F+ SL  H +WVR A FSPD  M  SGS+D+TV+LWD   +EC+    E    V +VAFHP G C+AA G D  +++WD RT  L+Q Y   H   +N ++FHSSGN+++T+S D TLK+ D+ E RL +T+HGH+G     AFS   D   FAS G  D  VMVW++N 
Sbjct:    8 PTLERHFKGHRDTVTSLDFNPNMKQLASGSMDSCLMVWNFKPQMRAYRFVGHKDAVMSVVFSPSGHLVASASRDKTVRLWIPSVKGESTVFKAHTATVRSVDFSPDGQALLTSSDDKSIKVWTVHRQKFQFSLNQHMNWVRCARFSPDGRMIVSGSDDKTVKLWDRNTKECVHTFFEHGGFVNSVAFHPSGTCIAAAGTDSTVKVWDIRTNRLLQHYQ-VHTAAVNGLSFHSSGNYLITASNDSTLKILDLLEGRLFYTLHGHQGPATTVAFSRAGD--FFASGG-SDEQVMVWKTNF 301          
BLAST of EWM30491.1 vs. NCBI_GenBank
Match: gi|1126201194|ref|XP_019633940.1| (PREDICTED: POC1 centriolar protein homolog A-like isoform X1 [Branchiostoma belcheri])

HSP 1 Score: 310.842 bits (795), Expect = 4.298e-96
Identity = 160/365 (43.84%), Postives = 219/365 (60.00%), Query Frame = 0
Query:   14 LVTPELERTFRGHRAGVLSLAFSPTIKQLASGVEDGTVHVWHFKPEQRAFRYPGHKGPVHSVQYSPSGRYLASGGGDAIVKLWEPSARGRALVLKNHSRAVRSVAFSADSRLLLTGSDDKTVKIISLHDRRFRGSLQGHSHWVRSATFSPDALMAASGSEDRTVRLWDVQNRECLGILMEAKDAVCAVAFHPDGACLAAGGRDRCLRIWDTRTQDLVQQYAPAHAEGINSVAFHSSGNFVLTSSQDGTLKVWDVREARLLFTVHGHRGRIAQAAFSPDADSSLFASAGMQDRTVMVWRSNL--APYNRVRTTVTAKEADADWPFSSSTSPAPHARPPY---------IPQRYAYAHTYEMDVPVP 367
            L  P LER F+GHR  V SL F+P +KQLASG  D  + VW+FKP+ RA+R+ GHK  V SV +SPSG  +AS   D  V+LW PS +G + V K H+  VRSV FS D + LLT SDDK++K+ ++H ++F+ SL  H +WVR A FSPD  M  SGS+D+TV+LWD   +EC+    E    V +VAFHP G C+AA G D  +++WD RT  L+Q Y   H   +N ++FHSSGN+++T+S D TLK+ D+ E RL +T+HGH+G     AFS   D   FAS G  D  VMVW++N     Y+ V   + + +A  + P           R P+         +PQ  A +    ++VP P
Sbjct:    5 LEDPTLERHFKGHRDTVTSLDFNPNMKQLASGSMDSCLMVWNFKPQMRAYRFVGHKDAVMSVVFSPSGHLVASASRDKTVRLWIPSVKGESTVFKAHTATVRSVDFSPDGQALLTSSDDKSIKVWTVHRQKFQFSLNQHMNWVRCARFSPDGRMIVSGSDDKTVKLWDRNTKECVHTFFEHGGFVNSVAFHPSGTCIAAAGTDSTVKVWDIRTNRLLQHYQ-VHTAAVNGLSFHSSGNYLITASNDSTLKILDLLEGRLFYTLHGHQGPATTVAFSRAGD--FFASGG-SDEQVMVWKTNFDQVDYSEV---LKSHKAQNEQPQPPPHIHDIPPRSPHTVRQVPRPAVPQLDARSEPRNLEVPSP 362          
BLAST of EWM30491.1 vs. NCBI_GenBank
Match: gi|1205891231|gb|OWF41970.1| (POC1 centriolar protein-like A [Mizuhopecten yessoensis])

HSP 1 Score: 309.301 bits (791), Expect = 1.118e-95
Identity = 153/345 (44.35%), Postives = 215/345 (62.32%), Query Frame = 0
Query:   13 ELVTPELERTFRGHRAGVLSLAFSPTIKQLASGVEDGTVHVWHFKPEQRAFRYPGHKGPVHSVQYSPSGRYLASGGGDAIVKLWEPSARGRALVLKNHSRAVRSVAFSADSRLLLTGSDDKTVKIISLHDRRFRGSLQGHSHWVRSATFSPDALMAASGSEDRTVRLWDVQNRECLGILMEAKDAVCAVAFHPDGACLAAGGRDRCLRIWDTRTQDLVQQYAPAHAEGINSVAFHSSGNFVLTSSQDGTLKVWDVREARLLFTVHGHRGRIAQAAFSPDADSSLFASAGMQDRTVMVWRSNL--APYNRVRTTVTAKEADADWPFSSSTSPAPHARPPYI--PQR 353
            +L  P LER F+GHR  + S+ F+P +KQLASG  D  + VW+FKP+ RA+R+ GHK  V  V++SPSG  +ASG  D  V+LW PS +G + V K H+  VRSV FS+D + LLT SDDKTVK+ ++H ++F  SL  H +WVR A FSPD  +  SGS+D+TV+LWD  ++EC+    E    V  V FHP G C+A+ G D  +++WD R   L+Q Y  AH+  +NS++FHSSGN++++ S D TLK++D+ E RL +T+HGH+G     AFS   +   FAS G  D  V+VW++N     +N V  +   +E        +S  P     PP +  PQR
Sbjct:    7 QLEDPSLERHFKGHRDTITSVDFNPNMKQLASGSMDSCLMVWNFKPQMRAYRFVGHKDAVMDVKFSPSGHLVASGSRDKTVRLWIPSVKGESTVFKAHTATVRSVDFSSDGQYLLTASDDKTVKVWTVHRQKFMFSLNQHMNWVRCARFSPDGRLVVSGSDDKTVKLWDKNSKECVHTFFEHGGFVNYVEFHPSGTCIASAGTDSTVKVWDIRMNKLLQHYT-AHSSSVNSLSFHSSGNYLISGSDDSTLKIFDLLEGRLFYTLHGHQGPSTAVAFSKSGE--YFASGG-SDEQVLVWKTNFDQLDFNEVLQSHKQREK-------TSAPPTVGDIPPRVQKPQR 340          

HSP 2 Score: 103.99 bits (258), Expect = 4.552e-20
Identity = 58/180 (32.22%), Postives = 90/180 (50.00%), Query Frame = 0
Query:  134 TVKIISLHDRRFRGSLQGHSHWVRSATFSPDALMAASGSEDRTVRLWDVQNRECLGILMEAKDAVCAVAFHPDGACLAAGGRDRCLRIWDTRTQDLVQQYAPAHAEGINSVAFHSSGNFVLTSSQDGTLKVWDVREARLLFTVHGHRGRIAQAAFSPDADSSLFASAGMQDRTVMVWRSN 313
             V I+ L D       +GH   + S  F+P+    ASGS D  + +W+ + +      +  KDAV  V F P G  +A+G RD+ +R+W    +     +  AH   + SV F S G ++LT+S D T+KVW V   + +F+++ H   +  A FSPD        +G  D+TV +W  N
Sbjct:    2 NVFIVQLEDPSLERHFKGHRDTITSVDFNPNMKQLASGSMDSCLMVWNFKPQMRAYRFVGHKDAVMDVKFSPSGHLVASGSRDKTVRLWIPSVKGESTVFK-AHTATVRSVDFSSDGQYLLTASDDKTVKVWTVHRQKFMFSLNQHMNWVRCARFSPDGR---LVVSGSDDKTVKLWDKN 177          
The following BLAST results are available for this feature:
BLAST of EWM30491.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113155|gb|EWM30491.1|0.000e+0100.00poc1 centriolar protein [Nannochloropsis gaditana][more]
gi|813170533|ref|XP_012204022.1|7.326e-10052.01hypothetical protein SPRG_20731 [Saprolegnia paras... [more]
gi|669171427|ref|XP_008621062.1|2.267e-9952.01hypothetical protein SDRG_16622 [Saprolegnia dicli... [more]
gi|922862023|gb|KOO29701.1|2.881e-9950.32poc1 centriolar protein-like a, partial [Chrysochr... [more]
gi|971515274|dbj|GAQ82916.1|5.143e-9748.66putative WD-40 repeat family protein [Klebsormidiu... [more]
gi|260809952|ref|XP_002599768.1|1.054e-9649.33hypothetical protein BRAFLDRAFT_205723 [Branchiost... [more]
gi|673025568|ref|XP_008866745.1|1.548e-9649.66hypothetical protein H310_04260 [Aphanomyces invad... [more]
gi|1126201196|ref|XP_019633941.1|4.189e-9649.33PREDICTED: POC1 centriolar protein homolog A-like ... [more]
gi|1126201194|ref|XP_019633940.1|4.298e-9643.84PREDICTED: POC1 centriolar protein homolog A-like ... [more]
gi|1205891231|gb|OWF41970.1|1.118e-9544.35POC1 centriolar protein-like A [Mizuhopecten yesso... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna199rna199Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications