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Properties
| Property Name | Value |
|---|
| Product | peptidase dimerization domain-containing protein |
| Orig transcript id | gnl|cribi|Naga_100002g50.4878.mrna |
| Orig protein id | gnl|cribi|Naga_100002g50.4878 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:592409..593949 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1968 ID=rna1968|Name=rna1968|organism=Nannochloropsis gaditana|type=mRNA|length=2026bp
TATTTAGTATCCTGATTCCGTGAAAGAATTGCTGTAAAGGAGGAAAAACG
TCAAGCAACAAAACAAAAAGAGCCTTCCCTAACCTTTAGCTAGTTCACTT
CAGGCCTGTAGAACGGGCTGACATGAATCCCCGAATCCCATATCATTGAC
AACACAGTACTTTAATAATGCCTTTGGCAAGGAGACTCATGGAATTTTTG
TTCATGCTTTTGCTTGTGGAAGGCGACGGGCTGGTCGCGAAGATCTTTTT
CCACAATAAATTGCCTACTCAGCTCCCGTGTTCCACGATGGCGTGTTGTC
GCAGAAATCCAGCGAAGAATCAAGGTCGAAAGGGAGGGGGGAACGAGACT
GAGCATGCGCATAAGCAATCCCAACAGCTTTGTATCCGAAACCAGCATCA
CAAATCCGCGGAGGGGGGGGCCGACTTTGCTTCATCCCTCGATCCGTCAA
GCAAATCAACTTCTCCTCTTGACTCTATTACAGCTTTCAAACCAGACATT
TTATCTCCAAGTTCTTTTATTCTCTTCGCACTCATGGCTTTCTACATTGT
GGATGCGTGTCTCTGCGACCTGTGGCTACCGCCAGCTAATGCGGTAGATG
CTAGTCTCATAACAGAAATCGATGTAGCTGGGATCTTGCAGAAAGCTGGA
AAAAAAGCGCTTGGAGGGGGGCTTTCGGGTGCGGTCGCGTCTTTAGTCCA
ACTTATTACGTTGATGTGGCTTCGCACCACCATGCAATACCAATACAGAT
ATGGGTTGCCGTTTGCAGCCACTGTTCAGCAACTTTACAAGGAGGGCGGC
ATAACTCGCTTTTATCAAGGCTTGCCCGTCGCCCTTTTCCAACTTCCACT
TTCCCGATTCGCTGATGTTGCTGCTAATGCGTTTATGATTGCTGCTCTCG
ATTCGTTTGAATCAACGCGCGGCCTACCTTTACCTCTAAAGTCCGCTTTT
GGAAGCATCGCGGCGGGTACCTGGCGATTGGTATTGACACCTTTGGACGT
GGTAAAGACAACATTGCAGGTATTATTCGTTATGTGATACGGACCTGAAC
TACGGCTGGGACGCATGAATTGATTGAATAGCGGTGTAAAATCTCTTCAA
AGAGCTCACTCACTAACGCATACACAGGTCCAAGGCTCAAAAGCTTTGCC
GCAGCTCGCAGCGCGGCTAAGAAGAGAGGGAATTCCTTCACTTTATCAAG
GAGCTGTTATTCAAGCAGTTGCCACGGCTGCGGGACACTGGCCTTACTTT
CTAACCTTCAATTATTTATCGTCGATTATCCCCGTACCACCTTCAGGTGA
AATTTTTCCGCGTCTGGGTAGAAATGCCTTCTTAGGTTTATGCTCTTCCA
CAACATCGGACGTGTGCTCGAATTGCTTCCGCGTTATCAAAACTACCAAA
CAGACGTCAGAATCATCAATTACATACCGGCAAGCTCTACGTCACATACT
GGATGAGGATGGCATTCAGGGTTTATTTGCTCGAGGCTTGCAAACAAGGT
TGGCTGCAAACGCTCTTCAAGGAATGTTGTTTGCTGTGGTATGGCGGTAT
CTGGAAGAATCCCAGCTTCTTTTCGGAGGCTAATGCACGCAGCTCTATTG
TGTTTTTCTTCTGTTGCCTGTTATGTAGTGTGCAGAGAGCTCCATGCATA
AAATTAGGGATGATCGTAAAACGGATTCAAAAAGATTGACGACTTTGCCA
AGCAATTCGATGGAAGGCGTCTTTGGAGCTTTTTTACAATGTCAAGCATT
TCACCGCATAGTCTTTGTTTGTCTTATCATATTTCTCTTCCATCGATGCC
ATTTCCGCGGTCTTTCAGCTCAACTGGTCCAAGATTGCCGCAATGATACT
GGATTATGATGTAGACTGAAATTTCGTTCAGAGCTCCTCAACTCCTTCCT
GTTGTGTGTATCATATTTATATGTCGAGAGCATACCGCTTCTTTCCATTT
GAAAATAGAAAAAAAAATTAAAACATCCCACAACGATGTCATCTAAAAGC
AAGAAATGAGAAACAGAACTGCTTCA back to topprotein sequence of rna1968 >rna1968-protein ID=rna1968-protein|Name=rna1968|organism=Nannochloropsis gaditana|type=polypeptide|length=211bp
MIRSQKGLLKLRLLSHGVSCHSGYPSLGKSAIDPLVDALQDLKRAHWPKN
EELGATTLNIGLLKGGHAANALAAEAEATLVFRLITPPEQVLETVRATVG
DRADVEVITANTPVQLNTLEGYATDVACFNTDIAYFDLREPTAQAFLMGP
GSILDAHSDHEVIHIPELQRAVAYYEEILLRLLKGPRGSTQRVASQAAES
VGASVVDARAL back to topmRNA from alignment at CM002458.1:592409..593949+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1968 ID=rna1968|Name=rna1968|organism=Nannochloropsis gaditana|type=mRNA|length=1541bp|location=Sequence derived from alignment at CM002458.1:592409..593949+ (Nannochloropsis gaditana)
CGGATAACTGGTCAAGGTCACGCATATTCTGTGTTACGAAACCTTTCACT
GCAGGGCATGATTACATCGGGACGGCTTGATTTTGTTGTCTCGGCACGCC
TCTCCATATTAGGGTTATTCCTTGGGATGCTGGCCTTTACCTCGTCAGCT
AGTACTGTCCAGTCCCCGACCGGGCCGTTGCCATCGATGTTGCCTGACAT
CGACGAGAGAAACGAGGACTCACCAGGTGAAGCAGTGATTCGCTTGGCCG
AGTCTCTCATAAACATCGAGTCGCTATCGGGGAGTGAGCACGCTATGGCA
CACGCTCTGAAAGGGTGGTTAAGCAAGCGTGGGTGGGAGGTTGTTCTTCA
GCCGgtgccgcccgccctcgggcacgaggaagaggtgagaAAAATGAACA
CCCTTTCCTGGCCGATACTCGAGGTCACGGACTTACGGCTTCTAAAAACT
CATCCTAGGGTGAACGCTGGAACGTCTACGCCTTCCGTCCCGGCACTGGC
GTCGCACGTCGGGATAAAGGCCCGAAGGTTCTGTTGAATTCTCACATTGA
CACGGTACCCCCCTTCTATTCCGCGACCGTGGATCGACAAAACGGTATAA
TTAGAGGTCGGGGTGCCTGCGACACAAAAGGTATTCTGGCCGCACAATTA
CTGGCGGCACAACGCCTGGTCGAGTCGGGCCAAGCCGCAGACCTGGGGCT
ACTCTACGTGGTTTCGGAGGAGACCGATCACAGTGGTATTAAGCAAGCGA
ACAGTCTAAACCTCCGCCCCAACTTTCTTTTAGTTGGTGAACCAACAGGG
TCGAAAATGATTCGCTCTCAGAAGGGTCTCCTGAAACTGCGGTTACTTTC
GCATGGCGTGTCCTGCCATAGCGGTTATCCGAGCTTGGGAAAGTCCGCCA
TCGACCCACTTGTAGACGCTCTGCAAGATCTTAAACGTGCTCATTGGCCT
AAAAATGAAGAATTGGGGGCCACTACACTAAACATTGGCCTGCTAAAAGG
CGGGCATGCTGCTAATGCTTTGGCAGCGGAGGCTGAGGCTACCCTTGTCT
TCCGCTTGATAACACCTCCCGAGCAGGTCTTAGAGACTGTGCGAGCAACT
GTGGGCGATCgcgcggacgtggaggtcaTCACTGCGAATACTCCCGTGCA
ATTAAATACGCTTGAAGGATATGCCACGGACGTGGCGTGTTTTAACACGG
ATATAGCCTACTTCGATCTGCGTGAACCCACCGCCCAGGCCTTTCTTATG
GGCCCCGGATCCATCTTGGACGCACACAGCGACCACGAAGTCATCCACAT
TCCTGAGTTGCAGCGTGCAGTCGCTTATTATGAGGAaatccttctccgcc
ttcttaAGGGGCCACGGGGGAGCACACAGCGCGTGGCGTCTCAGGCCGCA
GAAAGTGTAGGAGCGAGTGTTGTTGATGCCAGGGCACTTTAGCACCGAAA
GTTTcgtgaagaagaagcatGAAAGAGCTCTGAATCATCAGATTAGAACC
TATAAAACGTCTGAAAAAAGAAATGATACAGTGGGGAAATG back to topCoding sequence (CDS) from alignment at CM002458.1:592409..593949+ >rna1968 ID=rna1968|Name=rna1968|organism=Nannochloropsis gaditana|type=CDS|length=636bp|location=Sequence derived from alignment at CM002458.1:592409..593949+ (Nannochloropsis gaditana)
ATGATTCGCTCTCAGAAGGGTCTCCTGAAACTGCGGTTACTTTCGCATGG
CGTGTCCTGCCATAGCGGTTATCCGAGCTTGGGAAAGTCCGCCATCGACC
CACTTGTAGACGCTCTGCAAGATCTTAAACGTGCTCATTGGCCTAAAAAT
GAAGAATTGGGGGCCACTACACTAAACATTGGCCTGCTAAAAGGCGGGCA
TGCTGCTAATGCTTTGGCAGCGGAGGCTGAGGCTACCCTTGTCTTCCGCT
TGATAACACCTCCCGAGCAGGTCTTAGAGACTGTGCGAGCAACTGTGGGC
GATCgcgcggacgtggaggtcaTCACTGCGAATACTCCCGTGCAATTAAA
TACGCTTGAAGGATATGCCACGGACGTGGCGTGTTTTAACACGGATATAG
CCTACTTCGATCTGCGTGAACCCACCGCCCAGGCCTTTCTTATGGGCCCC
GGATCCATCTTGGACGCACACAGCGACCACGAAGTCATCCACATTCCTGA
GTTGCAGCGTGCAGTCGCTTATTATGAGGAaatccttctccgccttctta
AGGGGCCACGGGGGAGCACACAGCGCGTGGCGTCTCAGGCCGCAGAAAGT
GTAGGAGCGAGTGTTGTTGATGCCAGGGCACTTTAG back to top
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