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Properties
| Property Name | Value |
|---|
| Product | peroxisomal -dienoyl- reductase |
| Orig transcript id | gnl|cribi|Naga_100002g56.4875.mrna |
| Orig protein id | gnl|cribi|Naga_100002g56.4875 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:580853..582768 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1962 ID=rna1962|Name=rna1962|organism=Nannochloropsis gaditana|type=mRNA|length=2072bp
TCCCTAAGCATGCTCCCAATTTTACGGACGATCAGAATCGAATCTGTGGA
CTCTTCAATTCGCATGAACAGATCTTATTTGAACCGCGTGCCATGTCTAC
AACAGTCTCCAATTGTCAATCTCTAACTAACAAGTTGTAAGCCCGAGCAT
CGCCCGGTATACCATCTTGAGCCTGAAGTTTTAACACCATCATAACACCT
ATGCTCGCACGCAATCATCTCTTACGGAACAGGCATGTTTAAGCGCTTTG
TTTATAAGAGTGGTCTTCTTTTGAAGGGGACTGCTGGGGCGATCAACGAG
CCGACCTTATCTTCAGTACAAGCTGCCACAGCAGGTCTTATCGTCTTTGC
TGCCAATCAGACGATTCAAATAAAAGAAAGCCGCCGATCAATGACATTTT
CAACACAAAAAAAAGATGGAGGCAAGATAGCCTCGAACAAGCCGCTATCC
GTCGTTTTACAAGAATTTGAAGCTTCCCTTGACGCCAATGAACTGCGACC
GCTTATCGCAGAAAATGCTGAGGAGCTGCTCAAAGAGGCAGCGGATGCTG
TTCCCTTCGCACCGGGTACACGGGGATCTCGACGCAAAAAAAGACAGCGT
GAGCGCTTACGTGTCGTTCGGCGCGCTGACTACATCAGAAAGCTTCAGAA
AATTGCTAAACATGAGCAAAAGATGCAACGACGCTCTGTGGCCGCTGTTA
CTGAACGGCTAGGAAAACTGGGTTTATCTTTTCCAGTCAAAGATATGAAG
GGGCTAGAACGATCTGAAGCGCAGAAAGGTGATGTGTGAGCAAAAAAGAA
AAATCGTGACACTTGCCCATGTAGCGTACCTAATAACACGCGTAAGAGGT
TCTCTTCCTTTAGTCAAATCGTTTCTAAAATACTTCGGGAGAAATTGGCC
CTCCCAAGCTTCCGTTACCAAAAATACAGGATCTCCCCGTCGAAATATTC
GGAGCTGAAGGCCGCGACCTTCTTCGAAATCCACTTCTAGCTTCCTTCAG
ATGGAACAAGATCCTAGTGTACCTATGAAGGAGCTCTTCCCAAAACCCGT
GCTATCCGAGGCACCACAGCAATCGTCAGAATCATGCGTAGAGGTTCAGT
AATTTTCGTAAGGACCCAAGCTACGGCAAAGTTACCCGCATGCGGGTTAG
TTTGTATGGTTTCAACAAGCGGCTCACTCCAAGAATAATTCTCTAGGAGG
TGCGTGGCTTTCTCCACCAGCCAGTTCGAGTCCAAACCGTAGTCGAAAGG
GGTAAGACCTGACTCCACCGCTGCAAAGAGTGCACTAAGTGTCACGACAT
ACACGCCAAGATATGTTATCACGGCGACTGCTCCATATCGCTTAACCATC
AAACGCAGCTTTCCCATTTTATTGACATCTTCTTGAGGCCTGGTACTTTC
CGTTCCCATTCCAGCAGGTGCGGCACCCCCTTCGCCTTGGCTCCTTAAAT
TGCCCTTGCTCTCAATATCACGACCATTGCAGGTGGTGCTGCTGCTCCTT
TCGCCACTGCTAGTGCCGCTGCCCAACCGCGTATTGGAACCTGCAAGGCG
ATGACTGATGTGAAAAAGGCCTAGTGAAAGATTAGGGGCTCTCCTTGTGA
CGTAAAAATCGTCCAGAGCATCTAGACGATCGGCCCGCCGTATCCTCGCG
TGCGGGCCACCAAAATCTGCATGAATGTGTGTTTTGAACGCCAAATACCG
CTGAGGACTAGCCGATACAAAGCAAAGGCGACTTTGTTCATGACTGGACA
AAGTTGCTGTGGGTCTGATCCATGTGAGACCACAGACAGGAGAGCGCATT
GGAGCTGCACAACTAAATCGCAAGAGGCCCACGACGCCGCCTTGACCGCG
AAACATACTCAGCGATTATGCCTACGACAAATTTGAGAAGTGGATAGAAT
AATTGTGAGTTTTTCCCGAAAGCGTGCGACTTTTTCCCCTTAGAGCCTTG
ATTAGCTAGAGCGTGCGTGGCCGGTCTCAAAAAGCTTCTTTGGGGGGAAG
GAAACAGAGCCGCGCCCATGGTAGAGCATACTTCGTCATCATTAAAAAAA
ACGAAGATGAAGAATAATAAGA back to topprotein sequence of rna1962 >rna1962-protein ID=rna1962-protein|Name=rna1962|organism=Nannochloropsis gaditana|type=polypeptide|length=309bp
MSRLSASPFVTSILAGRVALVTGGGSGIGFEVARQLGLHGAKIIIMGRRK
SFLEKAVGLLAQEAVQATWVQGDVRQSEDADKAVEKAVHDFGSLSILVNA
AAGNFLVAGEDLSTKGFRTVMEIDTVGSFNMSRAAFKALKVAAEGGLIIN
ISATLHYGATWYQTHASAAKAAVDSLTRSLGLEWGSFGIRVVGIAPGPIA
DTPGMAKLAPADDSSAVDELVAEMIPLGRMGTKTDIALAAVFLCSSAGGF
ITGETLVVDGGHWLFKPQMLPRELVSDMSRRVESKSRAMTPSNGLSANAE
TISRPSSRL back to topmRNA from alignment at CM002458.1:580853..582768+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1962 ID=rna1962|Name=rna1962|organism=Nannochloropsis gaditana|type=mRNA|length=1916bp|location=Sequence derived from alignment at CM002458.1:580853..582768+ (Nannochloropsis gaditana)
CGTCAACTCAAGATGCAAACAGCACACCAGGCGGCTGTCATTGCAATGTT
TTGGGGGCCTGACGTCTACTTTAAGAAACTACATGTTGAGTAATCCTGTC
AATCAATCAGTCTTGTGCAGTCCATCTTTCTCACGGTCTCACACACCTAG
AGCTCATGAAAATCATACAGGGCATTTGAAAAACGCGAGACAAGGTCATG
TCTAGATTATCTGCATCCCCGTTTGTTACCAGCATACTGGCGGGAAGGTG
GGTGTGGCCGGGATATTTCCGGACGCAAAGTTGGACATTTTACCCCTGAA
ATTCACATCAGGCAATTGACGCTACAACAGCTAAAGAATCCGCCTGTCCG
CTCTATGCATTCCAGAGTTGCGTTGGTGACAGGTGGCGGTTCTGGCATTG
GGTTTGAGGTAGCGCGCCAGCTAGGTCTACACGGGGCGAAGGTAAGACGT
GCGAGGTATCATCGTCAGAAGTTTCAAACCAGAAGACTATCGGCTGCGGC
CTGCGACGGTCGCAGAGATTCACCACATGAGCATGACACTTACTTTATAC
GCTATACGTAGATTATCATTATGGGTCGACGAAAATCCTTTCTGGAGAAG
GCTGTAGGTTTGTTGGCACAGGAAGCCGTACAAGCGACATGTACGTATCG
TAGGTCCGAAGAGAATTTCCTAAAGAGTCGGTGGTGTTTTACCATTCCCA
GGTTCCTCAAAACAGGGGTACAAGGTGATGTACGACAATCAGAAGATGCG
GACAAAGCTGTGGAAAAAGCAGTCCACGATTTTGGGTGAGTGGCAAATTA
AAAGGTCCTTTGGATGAGACTTCTCAGAAGATGCCTGGCTGCCTTCCCCA
ACCTCATGCTCGAATGTCGCTTTATTTATTGCACAGCTCTCTGTCTATTC
TCGTGAATGCAGCTGCCGGAAATTTTTTGGTAGCAGGCGAAGATTTAAGC
ACAAAAGGATTTAGGGTGAGcggtcattttttttcctgcacATGTATATG
TATATAGATATTTAGGTGTCCTTATCAAACCGATGGCAGCTTTAGAAATT
TTACCGATCTTGGCACGCCTAGGATGACGTTTCACTTATTTAGAGGAGCG
ATGTAGAGGCTTTTGTGCAACAGAGGCTGAACTCAAGCTTTCTTTCCACC
CCACATGGATGGTTTCGCGTAGACCGTCATGGAAATCGATACCGTAGGGT
CTTTCAACATGAGTCGCGCCGCTTTTAAAGCGCTAAAAGTAGCAGCAGAG
GGTGGGTTGATCATTAACATTAGTGCCACATTGCACTACGGGGCGACATG
GTACCAAACGCACGCTTCAGCAGCCAAAGCTGCAGTGGACAGCCTGACAC
GGTCACTGGGGCTGGAGTGGGGCAGCTTTGGGATTCGTGTCGTAGGTATT
GCGCCGGGACCCATTGCCGACACACCCGGCATGGCTAAGTTGGCGCCTGC
TGACGATTCTTcggccgtggacgagctgGTGGCTGAGATGATCCCGCTGG
GCCGCATGGGAACGAAGACTGACATCGCGCTAGCTGCTGTCTTTTTGTGC
TCGTCCGCCGGCGGCTTTATAACGGGCGAGACTCTGGTGGTAGACGGTGG
ACATTGGCTGTTCAAGCCCCAGATGTTGCCACGGGAATTGGTCTCTGACA
TGTCCCGACGGGTCGAAAGCAAAAGTCGGGCAATGACCCCATCTAATGGG
CTGAGCGCCAACGCCGAGACCATAAGCCGACCGTCGAGTCGACTGTGAAT
TTGAGCGAGTCATATAGATTTACTAGCAAGTCGAAGGATTAAATGAGATG
AGAGAAGGTATTGGAAGACATTATGAAAGGACTTCCGGGAGGCACCATGA
GCTGGGCTAAAATTACGGGACGGTGGATCACGCAAAGAACACCTACAACT
GTATTCCCACACAATT back to topCoding sequence (CDS) from alignment at CM002458.1:580853..582768+ >rna1962 ID=rna1962|Name=rna1962|organism=Nannochloropsis gaditana|type=CDS|length=5580bp|location=Sequence derived from alignment at CM002458.1:580853..582768+ (Nannochloropsis gaditana)
ATGTCTAGATTATCTGCATCCCCGTTTGTTACCAGCATACTGGCGGGAAG
AGTTGCGTTGGTGACAGGTGGCGGTTCTGGCATTGGGTTTGAGGTAGCGC
GCCAGCTAGGTCTACACGGGGCGAAGATTATCATTATGGGTCGACGAAAA
TCCTTTCTGGAGAAGGCTGTAGGTTTGTTGGCACAGGAAGCCGTACAAGC
GACATGGGTACAAGGTGATGTACGACAATCAGAAGATGCGGACAAAGCTG
TGGAAAAAGCAGTCCACGATTTTGGCTCTCTGTCTATTCTCGTGAATGCA
GCTGCCGGAAATTTTTTGGTAGCAGGCGAAGATTTAAGCACAAAAGGATT
TAGGACCGTCATGGAAATCGATACCGTAGGGTCTTTCAACATGAGTCGCG
CCGCTTTTAAAGCGCTAAAAGTAGCAGCAGAGGGTGGGTTGATCATTAAC
ATTAGTGCCACATTGCACTACGGGGCGACATGGTACCAAACGCACGCTTC
AGCAGCCAAAGCTGCAGTGGACAGCCTGACACGGTCACTGGGGCTGGAGT
GGGGCAGCTTTGGGATTCGTGTCGTAGGTATTGCGCCGGGACCCATTGCC
GACACACCCGGCATGGCTAAGTTGGCGCCTGCTGACGATTCTTcggccgt
ggacgagctgGTGGCTGAGATGATCCCGCTGGGCCGCATGGGAACGAAGA
CTGACATCGCGCTAGCTGCTGTCTTTTTGTGCTCGTCCGCCGGCGGCTTT
ATAACGGGCGAGACTCTGGTGGTAGACGGTGGACATTGGCTGTTCAAGCC
CCAGATGTTGCCACGGGAATTGGTCTCTGACATGTCCCGACGGGTCGAAA
GCAAAAGTCGGGCAATGACCCCATCTAATGGGCTGAGCGCCAACGCCGAG
ACCATAAGCCGACCGTCGAGTCGACTGTGAATGTCTAGATTATCTGCATC
CCCGTTTGTTACCAGCATACTGGCGGGAAGAGTTGCGTTGGTGACAGGTG
GCGGTTCTGGCATTGGGTTTGAGGTAGCGCGCCAGCTAGGTCTACACGGG
GCGAAGATTATCATTATGGGTCGACGAAAATCCTTTCTGGAGAAGGCTGT
AGGTTTGTTGGCACAGGAAGCCGTACAAGCGACATGGGTACAAGGTGATG
TACGACAATCAGAAGATGCGGACAAAGCTGTGGAAAAAGCAGTCCACGAT
TTTGGCTCTCTGTCTATTCTCGTGAATGCAGCTGCCGGAAATTTTTTGGT
AGCAGGCGAAGATTTAAGCACAAAAGGATTTAGGACCGTCATGGAAATCG
ATACCGTAGGGTCTTTCAACATGAGTCGCGCCGCTTTTAAAGCGCTAAAA
GTAGCAGCAGAGGGTGGGTTGATCATTAACATTAGTGCCACATTGCACTA
CGGGGCGACATGGTACCAAACGCACGCTTCAGCAGCCAAAGCTGCAGTGG
ACAGCCTGACACGGTCACTGGGGCTGGAGTGGGGCAGCTTTGGGATTCGT
GTCGTAGGTATTGCGCCGGGACCCATTGCCGACACACCCGGCATGGCTAA
GTTGGCGCCTGCTGACGATTCTTcggccgtggacgagctgGTGGCTGAGA
TGATCCCGCTGGGCCGCATGGGAACGAAGACTGACATCGCGCTAGCTGCT
GTCTTTTTGTGCTCGTCCGCCGGCGGCTTTATAACGGGCGAGACTCTGGT
GGTAGACGGTGGACATTGGCTGTTCAAGCCCCAGATGTTGCCACGGGAAT
TGGTCTCTGACATGTCCCGACGGGTCGAAAGCAAAAGTCGGGCAATGACC
CCATCTAATGGGCTGAGCGCCAACGCCGAGACCATAAGCCGACCGTCGAG
TCGACTGTGAATGTCTAGATTATCTGCATCCCCGTTTGTTACCAGCATAC
TGGCGGGAAGAGTTGCGTTGGTGACAGGTGGCGGTTCTGGCATTGGGTTT
GAGGTAGCGCGCCAGCTAGGTCTACACGGGGCGAAGATTATCATTATGGG
TCGACGAAAATCCTTTCTGGAGAAGGCTGTAGGTTTGTTGGCACAGGAAG
CCGTACAAGCGACATGGGTACAAGGTGATGTACGACAATCAGAAGATGCG
GACAAAGCTGTGGAAAAAGCAGTCCACGATTTTGGCTCTCTGTCTATTCT
CGTGAATGCAGCTGCCGGAAATTTTTTGGTAGCAGGCGAAGATTTAAGCA
CAAAAGGATTTAGGACCGTCATGGAAATCGATACCGTAGGGTCTTTCAAC
ATGAGTCGCGCCGCTTTTAAAGCGCTAAAAGTAGCAGCAGAGGGTGGGTT
GATCATTAACATTAGTGCCACATTGCACTACGGGGCGACATGGTACCAAA
CGCACGCTTCAGCAGCCAAAGCTGCAGTGGACAGCCTGACACGGTCACTG
GGGCTGGAGTGGGGCAGCTTTGGGATTCGTGTCGTAGGTATTGCGCCGGG
ACCCATTGCCGACACACCCGGCATGGCTAAGTTGGCGCCTGCTGACGATT
CTTcggccgtggacgagctgGTGGCTGAGATGATCCCGCTGGGCCGCATG
GGAACGAAGACTGACATCGCGCTAGCTGCTGTCTTTTTGTGCTCGTCCGC
CGGCGGCTTTATAACGGGCGAGACTCTGGTGGTAGACGGTGGACATTGGC
TGTTCAAGCCCCAGATGTTGCCACGGGAATTGGTCTCTGACATGTCCCGA
CGGGTCGAAAGCAAAAGTCGGGCAATGACCCCATCTAATGGGCTGAGCGC
CAACGCCGAGACCATAAGCCGACCGTCGAGTCGACTGTGAATGTCTAGAT
TATCTGCATCCCCGTTTGTTACCAGCATACTGGCGGGAAGAGTTGCGTTG
GTGACAGGTGGCGGTTCTGGCATTGGGTTTGAGGTAGCGCGCCAGCTAGG
TCTACACGGGGCGAAGATTATCATTATGGGTCGACGAAAATCCTTTCTGG
AGAAGGCTGTAGGTTTGTTGGCACAGGAAGCCGTACAAGCGACATGGGTA
CAAGGTGATGTACGACAATCAGAAGATGCGGACAAAGCTGTGGAAAAAGC
AGTCCACGATTTTGGCTCTCTGTCTATTCTCGTGAATGCAGCTGCCGGAA
ATTTTTTGGTAGCAGGCGAAGATTTAAGCACAAAAGGATTTAGGACCGTC
ATGGAAATCGATACCGTAGGGTCTTTCAACATGAGTCGCGCCGCTTTTAA
AGCGCTAAAAGTAGCAGCAGAGGGTGGGTTGATCATTAACATTAGTGCCA
CATTGCACTACGGGGCGACATGGTACCAAACGCACGCTTCAGCAGCCAAA
GCTGCAGTGGACAGCCTGACACGGTCACTGGGGCTGGAGTGGGGCAGCTT
TGGGATTCGTGTCGTAGGTATTGCGCCGGGACCCATTGCCGACACACCCG
GCATGGCTAAGTTGGCGCCTGCTGACGATTCTTcggccgtggacgagctg
GTGGCTGAGATGATCCCGCTGGGCCGCATGGGAACGAAGACTGACATCGC
GCTAGCTGCTGTCTTTTTGTGCTCGTCCGCCGGCGGCTTTATAACGGGCG
AGACTCTGGTGGTAGACGGTGGACATTGGCTGTTCAAGCCCCAGATGTTG
CCACGGGAATTGGTCTCTGACATGTCCCGACGGGTCGAAAGCAAAAGTCG
GGCAATGACCCCATCTAATGGGCTGAGCGCCAACGCCGAGACCATAAGCC
GACCGTCGAGTCGACTGTGAATGTCTAGATTATCTGCATCCCCGTTTGTT
ACCAGCATACTGGCGGGAAGAGTTGCGTTGGTGACAGGTGGCGGTTCTGG
CATTGGGTTTGAGGTAGCGCGCCAGCTAGGTCTACACGGGGCGAAGATTA
TCATTATGGGTCGACGAAAATCCTTTCTGGAGAAGGCTGTAGGTTTGTTG
GCACAGGAAGCCGTACAAGCGACATGGGTACAAGGTGATGTACGACAATC
AGAAGATGCGGACAAAGCTGTGGAAAAAGCAGTCCACGATTTTGGCTCTC
TGTCTATTCTCGTGAATGCAGCTGCCGGAAATTTTTTGGTAGCAGGCGAA
GATTTAAGCACAAAAGGATTTAGGACCGTCATGGAAATCGATACCGTAGG
GTCTTTCAACATGAGTCGCGCCGCTTTTAAAGCGCTAAAAGTAGCAGCAG
AGGGTGGGTTGATCATTAACATTAGTGCCACATTGCACTACGGGGCGACA
TGGTACCAAACGCACGCTTCAGCAGCCAAAGCTGCAGTGGACAGCCTGAC
ACGGTCACTGGGGCTGGAGTGGGGCAGCTTTGGGATTCGTGTCGTAGGTA
TTGCGCCGGGACCCATTGCCGACACACCCGGCATGGCTAAGTTGGCGCCT
GCTGACGATTCTTcggccgtggacgagctgGTGGCTGAGATGATCCCGCT
GGGCCGCATGGGAACGAAGACTGACATCGCGCTAGCTGCTGTCTTTTTGT
GCTCGTCCGCCGGCGGCTTTATAACGGGCGAGACTCTGGTGGTAGACGGT
GGACATTGGCTGTTCAAGCCCCAGATGTTGCCACGGGAATTGGTCTCTGA
CATGTCCCGACGGGTCGAAAGCAAAAGTCGGGCAATGACCCCATCTAATG
GGCTGAGCGCCAACGCCGAGACCATAAGCCGACCGTCGAGTCGACTGTGA
ATGTCTAGATTATCTGCATCCCCGTTTGTTACCAGCATACTGGCGGGAAG
AGTTGCGTTGGTGACAGGTGGCGGTTCTGGCATTGGGTTTGAGGTAGCGC
GCCAGCTAGGTCTACACGGGGCGAAGATTATCATTATGGGTCGACGAAAA
TCCTTTCTGGAGAAGGCTGTAGGTTTGTTGGCACAGGAAGCCGTACAAGC
GACATGGGTACAAGGTGATGTACGACAATCAGAAGATGCGGACAAAGCTG
TGGAAAAAGCAGTCCACGATTTTGGCTCTCTGTCTATTCTCGTGAATGCA
GCTGCCGGAAATTTTTTGGTAGCAGGCGAAGATTTAAGCACAAAAGGATT
TAGGACCGTCATGGAAATCGATACCGTAGGGTCTTTCAACATGAGTCGCG
CCGCTTTTAAAGCGCTAAAAGTAGCAGCAGAGGGTGGGTTGATCATTAAC
ATTAGTGCCACATTGCACTACGGGGCGACATGGTACCAAACGCACGCTTC
AGCAGCCAAAGCTGCAGTGGACAGCCTGACACGGTCACTGGGGCTGGAGT
GGGGCAGCTTTGGGATTCGTGTCGTAGGTATTGCGCCGGGACCCATTGCC
GACACACCCGGCATGGCTAAGTTGGCGCCTGCTGACGATTCTTcggccgt
ggacgagctgGTGGCTGAGATGATCCCGCTGGGCCGCATGGGAACGAAGA
CTGACATCGCGCTAGCTGCTGTCTTTTTGTGCTCGTCCGCCGGCGGCTTT
ATAACGGGCGAGACTCTGGTGGTAGACGGTGGACATTGGCTGTTCAAGCC
CCAGATGTTGCCACGGGAATTGGTCTCTGACATGTCCCGACGGGTCGAAA
GCAAAAGTCGGGCAATGACCCCATCTAATGGGCTGAGCGCCAACGCCGAG
ACCATAAGCCGACCGTCGAGTCGACTGTGA back to top
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