EWM28756.1, cds1957 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28756.1 vs. NCBI_GenBank
Match: gi|585111179|gb|EWM28756.1| (peroxisomal -dienoyl- reductase [Nannochloropsis gaditana]) HSP 1 Score: 619.772 bits (1597), Expect = 0.000e+0 Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0
Query: 1 MSRLSASPFVTSILAGRVALVTGGGSGIGFEVARQLGLHGAKIIIMGRRKSFLEKAVGLLAQEAVQATWVQGDVRQSEDADKAVEKAVHDFGSLSILVNAAAGNFLVAGEDLSTKGFRTVMEIDTVGSFNMSRAAFKALKVAAEGGLIINISATLHYGATWYQTHASAAKAAVDSLTRSLGLEWGSFGIRVVGIAPGPIADTPGMAKLAPADDSSAVDELVAEMIPLGRMGTKTDIALAAVFLCSSAGGFITGETLVVDGGHWLFKPQMLPRELVSDMSRRVESKSRAMTPSNGLSANAETISRPSSRL 309
MSRLSASPFVTSILAGRVALVTGGGSGIGFEVARQLGLHGAKIIIMGRRKSFLEKAVGLLAQEAVQATWVQGDVRQSEDADKAVEKAVHDFGSLSILVNAAAGNFLVAGEDLSTKGFRTVMEIDTVGSFNMSRAAFKALKVAAEGGLIINISATLHYGATWYQTHASAAKAAVDSLTRSLGLEWGSFGIRVVGIAPGPIADTPGMAKLAPADDSSAVDELVAEMIPLGRMGTKTDIALAAVFLCSSAGGFITGETLVVDGGHWLFKPQMLPRELVSDMSRRVESKSRAMTPSNGLSANAETISRPSSRL
Sbjct: 1 MSRLSASPFVTSILAGRVALVTGGGSGIGFEVARQLGLHGAKIIIMGRRKSFLEKAVGLLAQEAVQATWVQGDVRQSEDADKAVEKAVHDFGSLSILVNAAAGNFLVAGEDLSTKGFRTVMEIDTVGSFNMSRAAFKALKVAAEGGLIINISATLHYGATWYQTHASAAKAAVDSLTRSLGLEWGSFGIRVVGIAPGPIADTPGMAKLAPADDSSAVDELVAEMIPLGRMGTKTDIALAAVFLCSSAGGFITGETLVVDGGHWLFKPQMLPRELVSDMSRRVESKSRAMTPSNGLSANAETISRPSSRL 309
BLAST of EWM28756.1 vs. NCBI_GenBank
Match: gi|633912228|gb|KDD76207.1| (hypothetical protein H632_c314p0 [Helicosporidium sp. ATCC 50920]) HSP 1 Score: 357.451 bits (916), Expect = 7.450e-121 Identity = 176/283 (62.19%), Postives = 215/283 (75.97%), Query Frame = 0
Query: 7 SPFVTSILAGRVALVTGGGSGIGFEVARQLGLHGAKIIIMGRRKSFLEKAVGLLAQEAVQATWVQGDVRQSEDADKAVEKAVHDFGSLSILVNAAAGNFLVAGEDLSTKGFRTVMEIDTVGSFNMSRAAFKALKVAAEGGLIINISATLHYGATWYQTHASAAKAAVDSLTRSLGLEWGSFGIRVVGIAPGPIADTPGMAKLAPADDSSAVDELVAEMIPLGRMGTKTDIALAAVFLCSSAGGFITGETLVVDGGHWLFKPQMLPRELVSDMSRRVESKSRAM 289
SPF + ILAGRVAL+TGGGSGIG+E+ RQLGLHGAK++I GRR+ L+ A L ++ +Q QGDVR+ E + V AV FGSLSILVN AAGNFL E LS+ GFRTV+EIDT+G+FN+ RAAF AL A +INISATL YGATWYQ HASAAK+AVDSLTRSL LEWGSFG+RV G+APGPIA T GMAKLAP + D++ A IP+GRMG + +IA A ++L SSAG F++G TLVVDGG W+++P + PRE V+ +SR VESKSRA+
Sbjct: 5 SPFKSDILAGRVALITGGGSGIGYEITRQLGLHGAKVVISGRRQQVLDGAAETLRKDGIQVHTAQGDVRKYESCEGMVAAAVSHFGSLSILVNCAAGNFLALPEQLSSNGFRTVLEIDTLGTFNVCRAAFPALSKCASSN-VINISATLQYGATWYQAHASAAKSAVDSLTRSLALEWGSFGVRVNGVAPGPIAGTAGMAKLAPGAEERMQDQM-ARAIPVGRMGERCEIAYACLYLASSAGSFVSGHTLVVDGGEWMYRPPLAPREAVAQLSRGVESKSRAV 285
BLAST of EWM28756.1 vs. NCBI_GenBank
Match: gi|1173953613|gb|OQS01141.1| (peroxisomal 2,4-dienoyl-CoA reductase [Achlya hypogyna]) HSP 1 Score: 337.035 bits (863), Expect = 6.205e-113 Identity = 174/279 (62.37%), Postives = 207/279 (74.19%), Query Frame = 0
Query: 9 FVTSILAGRVALVTGGGSGIGFEVARQLGLHGAKIIIMGRRKSFLEKAVGLLAQEAVQATWVQGDVRQSEDADKAVEKAVHDFGSLSILVNAAAGNFLVAGEDLSTKGFRTVMEIDTVGSFNMSRAAFKALKVAAEGGLIINISATLHYGATWYQTHASAAKAAVDSLTRSLGLEWGSFGIRVVGIAPGPIADTPGMAKLAPADDSSAVDELVAEMIPLGRMGTKTDIALAAVFLCSSAGGFITGETLVVDGGHWLFKPQMLPRELVSDMSRRVESKSR 287
F I A RVALVTGGGSGIG E+ARQLGLHGAK++IMGRR + LE AV LA E + A + GDVRQ DA AV V +G L+ILVN AAGNFL E LST FRTV++IDTVG+FNMSRAAF AL ++ GG IINISATLH ATWYQ HASAAKAAVDS+TRSL LEWG GIRVVGIAPGPIADTPG+ KLA AV++++ E+IPL R+GTKT+IA A+FL S G ITG T+V DGGH +++ +P E+V++ SR E+ +R
Sbjct: 2 FAADICADRVALVTGGGSGIGLEIARQLGLHGAKVVIMGRRPAVLEAAVAGLAAEGIAARCIAGDVRQPADAKAAVAMTVDTYGGLNILVNCAAGNFLSTAEQLSTNAFRTVLDIDTVGTFNMSRAAFTAL--SSHGGSIINISATLHKYATWYQVHASAAKAAVDSITRSLALEWGRVGIRVVGIAPGPIADTPGLNKLA----GDAVEDMIKEVIPLRRVGTKTEIAQIALFLVSPGGANITGHTIVADGGHHIYRDPPMPHEMVTEWSRDRETNAR 274
BLAST of EWM28756.1 vs. NCBI_GenBank
Match: gi|1173959581|gb|OQS05798.1| (peroxisomal 2,4-dienoyl-CoA reductase [Thraustotheca clavata]) HSP 1 Score: 327.791 bits (839), Expect = 2.630e-109 Identity = 161/279 (57.71%), Postives = 205/279 (73.48%), Query Frame = 0
Query: 9 FVTSILAGRVALVTGGGSGIGFEVARQLGLHGAKIIIMGRRKSFLEKAVGLLAQEAVQATWVQGDVRQSEDADKAVEKAVHDFGSLSILVNAAAGNFLVAGEDLSTKGFRTVMEIDTVGSFNMSRAAFKALKVAAEGGLIINISATLHYGATWYQTHASAAKAAVDSLTRSLGLEWGSFGIRVVGIAPGPIADTPGMAKLAPADDSSAVDELVAEMIPLGRMGTKTDIALAAVFLCSSAGGFITGETLVVDGGHWLFKPQMLPRELVSDMSRRVESKSR 287
F + A RV LVTGGGSGIGF ++RQ+GLHGAK++IMGRR + L+ AV L E + AT+V GDVRQ A A+EKAV +G L++LVN AAGNFL E LST FRTV+EIDTVG+FNM AAF LK+ GG+IINISA L ATWYQ HASAAKAA+DS+TRSL LEWG IRV+GIAPGPI+DTPG+ KLA A++++V E++PL R+GTK +IAL AVF + GG+ITG T++ DGG +++ +P E+V++ SR+ E KS+
Sbjct: 2 FTKDVCADRVVLVTGGGSGIGFAISRQMGLHGAKVVIMGRRAAVLQAAVASLTAEGIAATFVTGDVRQPAHAQAAIEKAVSTYGKLNVLVNCAAGNFLSTAEQLSTNAFRTVIEIDTVGTFNMCSAAFPQLKI--NGGVIINISAVLQKYATWYQVHASAAKAAIDSITRSLALEWGVHNIRVIGIAPGPISDTPGLNKLA----GDAIEDMVKEIVPLKRVGTKDEIALIAVFALTPGGGYITGHTIIADGGQHIYRDPPMPHEMVTEWSRQRELKSK 274
BLAST of EWM28756.1 vs. NCBI_GenBank
Match: gi|702315881|ref|XP_010051851.1| (PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Eucalyptus grandis] >gi|629110717|gb|KCW75677.1| hypothetical protein EUGRSUZ_D00036 [Eucalyptus grandis]) HSP 1 Score: 325.865 bits (834), Expect = 2.500e-108 Identity = 169/288 (58.68%), Postives = 205/288 (71.18%), Query Frame = 0
Query: 7 SPFVTSILAGRVALVTGGGSGIGFEVARQLGLHGAKIIIMGRRKSFLEKAVGLLAQEAVQATWVQGDVRQSEDADKAVEKAVHDFGSLSILVNAAAGNFLVAGEDLSTKGFRTVMEIDTVGSFNMSRAAFKALKVAAE------GGLIINISATLHYGATWYQTHASAAKAAVDSLTRSLGLEWGS-FGIRVVGIAPGPIADTPGMAKLAPADDSSAVDELVAEMIPLGRMGTKTDIALAAVFLCSSAGGFITGETLVVDGGHWLFKPQMLPRELVSDMSRRVESKSR 287
SPF +L G+VAL+TGGGSGIGFE++RQLGLHGA + +MGRRK+ L+ AV L + A V+GDVR+ +D +A+E V FG L ILVNAAAGNFLV EDLS GFRTV++ID+VG+F + A K LK GG IINISATLHY ATWYQ H SAAKAAVDS+TRSL LEWG+ + IRV GIAPGPI DTPG++KLAP D S+ E +PL ++G K DIA+AAV+L AG FI G TLVVDGG WL P+ LP++ V +SR VE +SR
Sbjct: 3 SPFKPDVLKGKVALLTGGGSGIGFEISRQLGLHGASVAVMGRRKNVLDSAVAALHLHGIPAIGVEGDVRKRDDVVRALESTVQSFGRLDILVNAAAGNFLVPAEDLSPNGFRTVIDIDSVGTFTVCHEALKYLKKGGPGKEPSCGGTIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYDIRVNGIAPGPIGDTPGVSKLAPGDALSS-----REQMPLFKLGEKWDIAMAAVYLACDAGKFINGTTLVVDGGSWLSAPRYLPKDEVRRLSRAVERRSR 285
BLAST of EWM28756.1 vs. NCBI_GenBank
Match: gi|1028943702|ref|XP_016715110.1| (PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase-like [Gossypium hirsutum]) HSP 1 Score: 325.094 bits (832), Expect = 4.623e-108 Identity = 169/295 (57.29%), Postives = 206/295 (69.83%), Query Frame = 0
Query: 7 SPFVTSILAGRVALVTGGGSGIGFEVARQLGLHGAKIIIMGRRKSFLEKAVGLLAQEAVQATWVQGDVRQSEDADKAVEKAVHDFGSLSILVNAAAGNFLVAGEDLSTKGFRTVMEIDTVGSFNMSRAAFKALKV------AAEGGLIINISATLHYGATWYQTHASAAKAAVDSLTRSLGLEWGS-FGIRVVGIAPGPIADTPGMAKLAPADDSSAVDELV---AEMIPLGRMGTKTDIALAAVFLCSSAGGFITGETLVVDGGHWLFKPQMLPRELVSDMSRRVESKSRAMTP 291
SPF IL G+V L+TGGGSGIGFE++ QLG HGA I IMGRRK L+ AV L + A +GDVR+ EDA + +E FG + ILVNAAAGNFLV EDLST GFRTVM+ID+VG+F M R A + LK + GG I+NISATLHY A+WYQ H SAAKAAVDS+TR+L LEWG+ + IRV GIAPGPIADTPG++KLAP DE+ E +P ++G K DIA++A++L S AG F+ G TLVVDGGHWL P+ LP+E V +SR VE +SR TP
Sbjct: 3 SPFKADILKGKVGLITGGGSGIGFEISTQLGKHGASIAIMGRRKHVLQAAVSALQSLGIHAVGFEGDVRKQEDAKRVIESTFKHFGHIDILVNAAAGNFLVPAEDLSTNGFRTVMDIDSVGTFTMCREALEYLKKGGRGRNSPSGGSILNISATLHYTASWYQIHVSAAKAAVDSITRNLALEWGTDYDIRVNGIAPGPIADTPGLSKLAP-------DEITIKAREHLPSYKIGDKWDIAMSAIYLVSDAGKFVNGTTLVVDGGHWLRNPRRLPKEEVKQLSRVVEKRSRE-TP 289
BLAST of EWM28756.1 vs. NCBI_GenBank
Match: gi|823154290|ref|XP_012477014.1| (PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Gossypium raimondii] >gi|763759635|gb|KJB26966.1| hypothetical protein B456_004G269100 [Gossypium raimondii]) HSP 1 Score: 325.094 bits (832), Expect = 5.688e-108 Identity = 167/291 (57.39%), Postives = 204/291 (70.10%), Query Frame = 0
Query: 7 SPFVTSILAGRVALVTGGGSGIGFEVARQLGLHGAKIIIMGRRKSFLEKAVGLLAQEAVQATWVQGDVRQSEDADKAVEKAVHDFGSLSILVNAAAGNFLVAGEDLSTKGFRTVMEIDTVGSFNMSRAAFKALKV------AAEGGLIINISATLHYGATWYQTHASAAKAAVDSLTRSLGLEWGS-FGIRVVGIAPGPIADTPGMAKLAPADDSSAVDELV---AEMIPLGRMGTKTDIALAAVFLCSSAGGFITGETLVVDGGHWLFKPQMLPRELVSDMSRRVESKSR 287
SPF IL G+V L+TGGGSGIGFE++ QLG HGA I IMGRRK L+ AV L + A +GDVR+ EDA + +E FG + ILVNAAAGNFLV EDLST GFRTVM+ID+VG+F M R A + LK + GG I+NISATLHY A+WYQ H SAAKAAVDS+TR+L LEWG+ + IRV GIAPGPIADTPG++KLAP DE+ E +P ++G K DIA++A++L S AG F+ G TLVVDGGHWL P+ LP+E V +SR VE +SR
Sbjct: 3 SPFKADILKGKVGLITGGGSGIGFEISTQLGKHGASIAIMGRRKHVLQAAVSALQSLGIHAVGFEGDVRKPEDAKRVIESTFKHFGHIDILVNAAAGNFLVPAEDLSTNGFRTVMDIDSVGTFTMCREALEYLKKGGRGRNSPSGGSILNISATLHYTASWYQIHVSAAKAAVDSITRNLALEWGTDYDIRVNGIAPGPIADTPGLSKLAP-------DEITIKAREHLPSYKIGDKWDIAMSAIYLVSDAGKFVNGTTLVVDGGHWLRNPRRLPKEEVKQLSRVVEKRSR 286
BLAST of EWM28756.1 vs. NCBI_GenBank
Match: gi|661882565|emb|CDP13568.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 324.709 bits (831), Expect = 7.722e-108 Identity = 167/292 (57.19%), Postives = 209/292 (71.58%), Query Frame = 0
Query: 7 SPFVTSILAGRVALVTGGGSGIGFEVARQLGLHGAKIIIMGRRKSFLEKAVGLLAQEAVQATWVQGDVRQSEDADKAVEKAVHDFGSLSILVNAAAGNFLVAGEDLSTKGFRTVMEIDTVGSFNMSRAAFKALKV------AAEGGLIINISATLHYGATWYQTHASAAKAAVDSLTRSLGLEWGS-FGIRVVGIAPGPIADTPGMAKLAPADDSSAVDELVAEMIPLGRMGTKTDIALAAVFLCSSAGGFITGETLVVDGGHWLFKPQMLPRELVSDMSRRVESKSRAMTP 291
SPF +L G+VAL+TGG SGIGFE++RQ G+HGA I +MGRRKS L+ AV L + A GDVR+ EDA + VE V FG L ILVNAAAGNFLV+ EDLS GFRTV++ID+VG+F M A K LK + GGLI+NISATLHY A+WYQ H SAAKAAVDSLTRSL LEWG+ + IRV GIAPGPI+DT GM+KL+P + SS E +PL ++G K DIA++A++L S AG ++ G T+ VDGG WL +P+ LP++ V +SR VE++SRA TP
Sbjct: 3 SPFKGDVLKGKVALLTGGASGIGFEISRQFGIHGASIAVMGRRKSVLDSAVSSLQSLGIPAVGFDGDVRKQEDAKRVVESTVKHFGKLDILVNAAAGNFLVSPEDLSPNGFRTVLDIDSVGTFTMCHEALKYLKKGGPGRRSCSGGLILNISATLHYTASWYQIHVSAAKAAVDSLTRSLALEWGTDYDIRVNGIAPGPISDTTGMSKLSPEEISSK----AREYMPLYKLGEKWDIAMSALYLASDAGKYVNGTTIAVDGGLWLSRPRHLPKDAVKQLSRTVENRSRA-TP 289
BLAST of EWM28756.1 vs. NCBI_GenBank
Match: gi|1130845913|dbj|GAV73496.1| (adh_short_C2 domain-containing protein [Cephalotus follicularis]) HSP 1 Score: 324.324 bits (830), Expect = 1.291e-107 Identity = 164/288 (56.94%), Postives = 205/288 (71.18%), Query Frame = 0
Query: 7 SPFVTSILAGRVALVTGGGSGIGFEVARQLGLHGAKIIIMGRRKSFLEKAVGLLAQEAVQATWVQGDVRQSEDADKAVEKAVHDFGSLSILVNAAAGNFLVAGEDLSTKGFRTVMEIDTVGSFNMSRAAFKALKV------AAEGGLIINISATLHYGATWYQTHASAAKAAVDSLTRSLGLEWGS-FGIRVVGIAPGPIADTPGMAKLAPADDSSAVDELVAEMIPLGRMGTKTDIALAAVFLCSSAGGFITGETLVVDGGHWLFKPQMLPRELVSDMSRRVESKSR 287
SPF I+ G+V L+TGGGSGIGFE++ Q G HGA + IMGRRK L+ AV L ++A +GDVR+ EDA + VE FG + ILVNAAAGNFLV+ EDLS GFRTVM+ID+VG+F M AA K LK +A GG+IINISATLHY A+WYQ H SAAKAAVDS+TR+L LEWG+ + IRV GIAPGPI DTPGM+KLAP D +D + +PL ++G K DIA+AA++L S+AG +I G LVVDGG WL +P+ +P+ V +SR VE +SR
Sbjct: 4 SPFKADIVKGQVVLITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDSAVSTLHSFGIKAVGFEGDVRKQEDAIRVVESTFKHFGKIDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHAALKYLKKGGQGRDSASGGIIINISATLHYTASWYQIHVSAAKAAVDSITRNLALEWGTDYNIRVNGIAPGPIGDTPGMSKLAPDD----IDSKARDFMPLYKLGEKWDIAIAALYLASNAGKYINGTVLVVDGGLWLSRPRHIPKVAVKQVSRAVEKRSR 287
BLAST of EWM28756.1 vs. NCBI_GenBank
Match: gi|545355615|ref|XP_005643588.1| (NAD(P)-binding protein [Coccomyxa subellipsoidea C-169] >gi|384245551|gb|EIE19044.1| NAD(P)-binding protein [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 324.324 bits (830), Expect = 1.370e-107 Identity = 179/300 (59.67%), Postives = 222/300 (74.00%), Query Frame = 0
Query: 7 SPFVTSILAGRVALVTGGGSGIGFEVARQLG-LHGAKIIIMGRRKSFLEKAVGLLAQEAVQATWVQGDVRQSEDADKAVEKAVHDFGSLSILVNAAAGNFLVAGEDLSTKGFRTVMEIDTVGSFNMSRAAFKALKVAAEGGLIINISATLHYGATWYQTHASAAKAAVDSLTRSLGLEWGSFGIRVVGIAPGPIADTPGMAKLAPADDS-SAVDELVAEMIPLGRMGTKTDIALAAVFLCSSAGGFITGETLVVDGGHWLFKPQMLPRELVSDMSRRVESKSRAMTPSNGLSANAETISR 304
SPF T ILAG+VAL+TGGGSGIG E+ RQLG LHGA + I GRR+ L AV L E + A +QGDVR++ D ++ V++ FG L +L+N AAGNFL + E+L+ GFRTVMEID +G+F +SRAAF AL+ A GG I+NISATLHYGATW+Q HASAAKAAVDSLTRSL +EWG+FG+RV GIAPGP T G++KLA D S V+ELVA IP+GR+G+K DIA+AAVFLCSSA ITG+TLVVDG W+++ +PRE VS SR VE+KSRA+ GLS + S+
Sbjct: 9 SPFRTDILAGQVALITGGGSGIGREITRQLGSLHGAAVAISGRRQQVLNDAVAALQDEGIDAMGLQGDVRKAADCERWVQETTARFGRLDVLINCAAGNFLASAEELTVNGFRTVMEIDAIGTFAVSRAAFPALR--ARGGSIVNISATLHYGATWWQAHASAAKAAVDSLTRSLAVEWGAFGVRVNGIAPGPTGGTAGVSKLAGVDASEEEVNELVAATIPIGRVGSKWDIAIAAVFLCSSAARHITGDTLVVDGAAWMWRQPAVPREFVSKASRGVEAKSRAV----GLSGPGQQRSK 302 The following BLAST results are available for this feature:
BLAST of EWM28756.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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