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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100002g67.4940.mrna |
| Orig protein id | gnl|cribi|Naga_100002g67.4940 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:561447..561745 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1951 ID=rna1951|Name=rna1951|organism=Nannochloropsis gaditana|type=mRNA|length=1301bp
ACTATCTTGCCATTGTACGTGCTCAAACTCCTACACATTTCTCTCCTCGC
ACAGTAAAGTAGTTCAGAGCTCGGAGAGCGACGCGCCCCATGGCTGCGCT
GGTGCTTCAGACTCTAGCCCTTGCAACTTTTCTGATGCCCCTTGAGGCCT
TCCTCTGCGACTATTTTCCCTCGCCGTTGCGGAGCCAGCCGCGGCGTCAA
CAAGACTACCAGGACGCTTGGCACGAGCGCAACATTCAACAGAGACATGT
ATTCTCAAGCCTTGGACAGAAATCGACGGCCTCACGGCAAGACACTGTGA
AGGAGCGGCTAGCACAGGAGTGGGAATTGGACTGCTATTCTCGGCCCGTG
GTCGGAGAAGACGGTAAAAAACTCTGGGAGCTGATGGTATGCGACTCACT
AGGGGAGTTTCGCGCTGTAGAAACTATGCCTAGCAACATGGTCAATAGTA
GGGAACTTCGTAAGCTCGTTGAAAAGGTGATTGAAGATGCCCCCGTTAAA
CCTCGGGTGATACGCTTTTTCCGCAATGCCATGTTCAACATGGTCAGCCT
TGCTCTCAAGGATCTTAAGGTCCGCGTTGTCCCCAGTCGCTCCACAAACG
CATTGTATAGCTGGATAGATGAGCGAGAGCGGGAAGTTTATGCCAAGTTG
CCTGGCTACGACCCCCAGATGCGAGACTCTAACGATGTCTTCGGTCTGCG
GGAGCCTGAGGTCATGCCCGACGGTCTTATGGGTGATAAGTACGCTTTTA
TGTGCCTGCCGGTTTCTCAGTTTTTGGACGGAGAAGTCAATTACGAGAAC
AGTGGTATCGGAAGGCTTTTCCAGCTCGACGCCTCCCTGCCTCGGGATGA
GCAAGTGCAAGGCCTCGTTATCTACAGCTCGCGCGCCAAATCCATCGCTG
CCTGGCTACACAGCATGGAGCTCTGTTTTATCAAAGCCAACTTTAGTAAG
CGCATCATGGTTTTAGAGGTAGGGATTGACACACAGTACCTCATGGCCAC
ACTTAACGACATCCGCCGCGTGGAGGCGCAGATCTTCGAGCAGGGCAAGG
AGAAGCTGGGAGGGGTCCATTTCCTGGCTTTGCAGACGGACGAGGAGAGT
GACGGTGTCGAAGGCTTCTTCTTGTTGCGCGAGCGGAAGCGATGATTGCG
ACAAAGTGGAGGTCATGAACTGAACCGTCGAAGCAGAAAAGAGGAAAACG
CTATTCGAGGATATGCGAGTACATTACAGGCCCTTGCGTCTTGCGTTAAC
GCATCGAGTACGACAAAAATAAGAACAGAAAAAAATGCTCACTGCAGCAC
A back to topprotein sequence of rna1951 >rna1951-protein ID=rna1951-protein|Name=rna1951|organism=Nannochloropsis gaditana|type=polypeptide|length=76bp
MCFTISFFLPSSHSKHLVLHHFKAIHTMGRLWMVQDKACLSSEILLYLHL
HHLNRTLWSFVPCHVVGDEGASITFY back to topmRNA from alignment at CM002458.1:561447..561745+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1951 ID=rna1951|Name=rna1951|organism=Nannochloropsis gaditana|type=mRNA|length=299bp|location=Sequence derived from alignment at CM002458.1:561447..561745+ (Nannochloropsis gaditana)
ATGTGTTTCAccatttcctttttcctcccttcatcccatTCAAAGCATCT
GGTTTTGCATCATTTTAAAGCTATACATACTATGGGAAGACTTTGGATGG
TACAGGATAAAGCATGCCTCAGCTCGGAGATCCTGTTGTATCTCCATTTA
CATCACGTATACATATACATATGATATGAAGGCCTTCACACGttttcttt
ctcgtccgcGGGTTTGGAAAGTAGCTCAATCGAACGTTGTGGTCCTTTGT
TCCGTGTCATGTTGTAGGTGATGAAGGTGCCAGCATAACATTCTATTGA back to topCoding sequence (CDS) from alignment at CM002458.1:561447..561745+ >rna1951 ID=rna1951|Name=rna1951|organism=Nannochloropsis gaditana|type=CDS|length=462bp|location=Sequence derived from alignment at CM002458.1:561447..561745+ (Nannochloropsis gaditana)
ATGTGTTTCAccatttcctttttcctcccttcatcccatTCAAAGCATCT
GGTTTTGCATCATTTTAAAGCTATACATACTATGGGAAGACTTTGGATGG
TACAGGATAAAGCATGCCTCAGCTCGGAGATCCTGTTGTATCTCCATTTA
CATCACCTCAATCGAACGTTGTGGTCCTTTGTTCCGTGTCATGTTGTAGG
TGATGAAGGTGCCAGCATAACATTCTATTGAATGTGTTTCAccatttcct
ttttcctcccttcatcccatTCAAAGCATCTGGTTTTGCATCATTTTAAA
GCTATACATACTATGGGAAGACTTTGGATGGTACAGGATAAAGCATGCCT
CAGCTCGGAGATCCTGTTGTATCTCCATTTACATCACCTCAATCGAACGT
TGTGGTCCTTTGTTCCGTGTCATGTTGTAGGTGATGAAGGTGCCAGCATA
ACATTCTATTGA back to top
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