EWM28821.1, cds1946 (CDS) Nannochloropsis gaditana

Overview
NameEWM28821.1
Unique Namecds1946
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:561447..561602 +
Alignment locationCM002458.1:561671..561745 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28821.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100002g67.4940.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:561447..561602 +
CM002458.1supercontigCM002458.1:561671..561745 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28821.1 vs. NCBI_GenBank
Match: gi|585111244|gb|EWM28821.1| (hypothetical protein Naga_100002g67 [Nannochloropsis gaditana])

HSP 1 Score: 156.762 bits (395), Expect = 1.316e-48
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 
Query:    1 MCFTISFFLPSSHSKHLVLHHFKAIHTMGRLWMVQDKACLSSEILLYLHLHHLNRTLWSFVPCHVVGDEGASITFY 76
            MCFTISFFLPSSHSKHLVLHHFKAIHTMGRLWMVQDKACLSSEILLYLHLHHLNRTLWSFVPCHVVGDEGASITFY
Sbjct:    1 MCFTISFFLPSSHSKHLVLHHFKAIHTMGRLWMVQDKACLSSEILLYLHLHHLNRTLWSFVPCHVVGDEGASITFY 76
The following BLAST results are available for this feature:
BLAST of EWM28821.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111244|gb|EWM28821.1|1.316e-48100.00hypothetical protein Naga_100002g67 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1951rna1951Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications