|
|
Properties
| Property Name | Value |
| Product | hydroxymethylglutaryl- lyase |
| Orig transcript id | gnl|cribi|Naga_100002g74.4826.mrna |
| Orig protein id | gnl|cribi|Naga_100002g74.4826 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| CM002458.1 | supercontig | CM002458.1:532255..534102 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1945 ID=rna1945|Name=rna1945|organism=Nannochloropsis gaditana|type=mRNA|length=807bp ATGCTCATCTTCTCCCACTACAATTTTCGCAAGCGACTCCTGGACAAGGC TCGCAATTACAAAGACACCAATGTGTTGATTGTGAACGAGGCCTACACCA GCAAAACCTGCACCTGTTGTGGAACAATTCACAACAAGTTTGGTGTCAAC AAAACATTCGATTGTCGATCTGGGAATGCCAAGAGTAACGGTTTTCGTCC TTTGGCTTTGTCCCAGGGTCTTGCGATTCGAATCCAGCGACTGAAATACT CATTTCTTGCTAGAAAGGAAGAGAGAGCGGCAAGATTTGCAGCTGTTTTG GCGATCAATGCACGGTGGTTGAGCGTGCGGGAGGAGGGCCCGAGACTTCA GCAAAGCCTACGTCATCCGTGGGCTCGTCGATCGTACGGTCGTCCGGGGC GTCGTTCAAATCAAAATTTCACACAGGATTCGCTTTTGGGAGCCGCCATC GCTTGCAGGCAGTTTTTCTTTGAAGACGCTGCAATAGACGCAATCACTTA TAACGCTATGAACATCGAACGCCCGCTAGCTGGCCTCTCCGAGGAACGCA TTGTTTCAGATCGAATCGCTCGTATTTATGAATCCTTCGTTTTTGGGAGC CGAGACGCTGAAGCTGAAGTAGAATCCGGCCTTGCACACCTGTTCCTTGT CATTGCACTAGAAGTCACTCTCAATTTTCGATACGTAACCCTATCAGTCA AAGCTGGAGTAGAACGGGCCCCTGTATATACGGATCTTGTCATTGCACTG AAATTGCATTCAGGTCTCGAAACGAGAAAATCTAGACCTTCAAGCGAGGA GTTTTGA back to topprotein sequence of rna1945 >rna1945-protein ID=rna1945-protein|Name=rna1945|organism=Nannochloropsis gaditana|type=polypeptide|length=354bp MLACRLQAVSCRRLAPYPLYPVLSMTLCLVCDKKRSKSSTSSASSLFPLA PRTVRIVEVGPRDGLQNEQAIISTETKVELIDRLSDTGLQTIEATAFVSK KWVPQMGDSTEVMARIHKKPGVGYPVLTPNLKGFEDALSAGATEVSVFGA ASEAFSLKNINCSVAESLDRFQPVIAAAKAHKFKVRGYVSCVLGCPYEGK VAPEKVAKVARALYDMGCYEISLGDTIGTGTPGSTRAMLLATKAFIPAEH LAVHFHDTYGQALANILTALQEGIGVVDASVAGLGGCPYAAGASGNVATE DVVYMLHGMGICTGIDLSSLARAGHFISEAVGRNTQSKAGREILKKNDQQ TTEK back to topmRNA from alignment at CM002458.1:532255..534102+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1945 ID=rna1945|Name=rna1945|organism=Nannochloropsis gaditana|type=mRNA|length=1848bp|location=Sequence derived from alignment at CM002458.1:532255..534102+ (Nannochloropsis gaditana) ATGCTGGCATGTAGATTACAAGCAGTATCATGCCGCCGTTTGGCTCCTTA
CCCTTTGTACCCCGTTTTGTCAATGACTCTCTGCCTCGTCTGTGACAAAA
AGCGATCTAAGTCGTCTACTTCATCTGCCTCATCATTATTCCCGCTTGCT
CCCCGGACTGTGCGCATAGTCGAAGTAAGTAGGCAAAACTTACTATCCTC
ATGAATCATCCTTTTGAAATACCAAGACTAACAGAACTCCGCTCTTCAAT
CCGCACTCTTGCGCGAAAATGTAGGTGGGCCCACGGGACGGCCTTCAAAA
TGAGCAGGCAATAATTTCCACCGAGACCAAAGTGGAGCTGATTGACAGGT
GAAGCTTTTATATCTTGCATTCCGCAGATACATAGTACGGTCATCTATTT
GATGTTTTCTGCAAAATGCATGCACTCATACAGTGAGTTAATGGGGCCAC
ATGAGGTTGTGGCCGCACTAGTTACTATTTTTGTAAAACAAACCTATCGT
CCACTGCCGAAGAGCATTATCTGTATCAGGCTCCTTCGACTAGCATCATG
CGTAACACCGCCATGCCATATAACGGATGTAACACACAGGCTTTCTGACA
CCGGCCTCCAAACCATAGAAGCTACGGCGTTTGTCTCGAAAAAATGGGTT
CCCCAGATGGGCGATTCCACGGAGGTGATGGCACGCATCCACAAAAAGCC
CGGAGTAGGGTACCCGGTCCTCACGCCTAATTTGAAGGTAATATGGTGCC
ATCTAGGATGCGCTAGAACATGACTTTCGCGTTTCCTGCTCGTTACTTGA
CAAAAGGTTGAAGTACTGCCGGTACTTGCCCCACGCCAATAGGGTTTTGA
GGATGCGCTCAGTGCAGGAGCGACAGAGGTATCCGTATTTGGTGCAGCCT
CTGAGGCATTCAGCCTAAAGAATATCAACTGCAGGTAAGAGCCTGCTCTT
TCGATAAAGATGAATTATACCCGGCTTTGTTTGTTGCGAAAGCTGGAATG
ATCAGATTTTGAATACATGTACATATGTATAAAGATGTCGAGTTCATTCT
GTCTTTCTTGCTTCACAGCGTGGCGGAGAGCTTAGATCGTTTTCAGCCTG
TGATAGCTGCTGCGAAAGCTCACAAATTCAAAGTCCGTGGTTATGTCTCT
TGCGTTTTAGGATGTCCATATGAAGGCAAAGTTGCACCAGAAAAGGTCGC
GAAAGTGGCAAGGGCCTTGTATGATATGGGTTGTTACGAGATCTCTCTAG
GAGATACAATCGGCACGGGTACGCCAGGTGCGTCTTTTTGTACATTGAAA
TGGTAAAAGACATTCATTTCAAAATAATGTGATCGCGTTCTAGTTCTATT
TGAATATAacgccatctcctctttcgcACTCAGGATCCACACGAGCCATG
CTTCTCGCTACTAAAGCTTTTATCCCAGCAGAGCATCTGGCCGTGCATTT
TCACGACACATATGGGCAAGCCCTGGCCAATATTCTAACAGGTGAGGAAA
TAAGATGCCTTTCAAGACATACATAAATAATAGCGAAGGAACATTCAGGT
GGATCTATTACTGACCAAGTTGAATTCCGCCATCTTAGCTCTTCAAGAAG
GCATCGGCGTAGTCGATGCCTCGGTGGCAGGTTTGGGGGGCTGCCCTTAC
GCTGCGGGAGCTTCGGGGAACGTAGCTACAGAGGACGTAGTGTACATGCT
GCATGGCATGGGAATATGTACAGGAATCGATCTCAGCTCCCTTGCTCGGG
CAGGACACTTTATCAGCGAGGCAGTTGGTCGGAACACACAGTCTaaagca
ggaagggagataTTGAAAAAAAATGATCAACAGACTACCGAAAAGTAA back to topCoding sequence (CDS) from alignment at CM002458.1:532255..534102+ >rna1945 ID=rna1945|Name=rna1945|organism=Nannochloropsis gaditana|type=CDS|length=7455bp|location=Sequence derived from alignment at CM002458.1:532255..534102+ (Nannochloropsis gaditana) ATGCTGGCATGTAGATTACAAGCAGTATCATGCCGCCGTTTGGCTCCTTA CCCTTTGTACCCCGTTTTGTCAATGACTCTCTGCCTCGTCTGTGACAAAA AGCGATCTAAGTCGTCTACTTCATCTGCCTCATCATTATTCCCGCTTGCT CCCCGGACTGTGCGCATAGTCGAAGTGGGCCCACGGGACGGCCTTCAAAA TGAGCAGGCAATAATTTCCACCGAGACCAAAGTGGAGCTGATTGACAGGC TTTCTGACACCGGCCTCCAAACCATAGAAGCTACGGCGTTTGTCTCGAAA AAATGGGTTCCCCAGATGGGCGATTCCACGGAGGTGATGGCACGCATCCA CAAAAAGCCCGGAGTAGGGTACCCGGTCCTCACGCCTAATTTGAAGGGTT TTGAGGATGCGCTCAGTGCAGGAGCGACAGAGGTATCCGTATTTGGTGCA GCCTCTGAGGCATTCAGCCTAAAGAATATCAACTGCAGCGTGGCGGAGAG CTTAGATCGTTTTCAGCCTGTGATAGCTGCTGCGAAAGCTCACAAATTCA AAGTCCGTGGTTATGTCTCTTGCGTTTTAGGATGTCCATATGAAGGCAAA GTTGCACCAGAAAAGGTCGCGAAAGTGGCAAGGGCCTTGTATGATATGGG TTGTTACGAGATCTCTCTAGGAGATACAATCGGCACGGGTACGCCAGGAT CCACACGAGCCATGCTTCTCGCTACTAAAGCTTTTATCCCAGCAGAGCAT CTGGCCGTGCATTTTCACGACACATATGGGCAAGCCCTGGCCAATATTCT AACAGCTCTTCAAGAAGGCATCGGCGTAGTCGATGCCTCGGTGGCAGGTT TGGGGGGCTGCCCTTACGCTGCGGGAGCTTCGGGGAACGTAGCTACAGAG GACGTAGTGTACATGCTGCATGGCATGGGAATATGTACAGGAATCGATCT CAGCTCCCTTGCTCGGGCAGGACACTTTATCAGCGAGGCAGTTGGTCGGA ACACACAGTCTaaagcaggaagggagataTTGAAAAAAAATGATCAACAG ACTACCGAAAAGTAAATGCTGGCATGTAGATTACAAGCAGTATCATGCCG CCGTTTGGCTCCTTACCCTTTGTACCCCGTTTTGTCAATGACTCTCTGCC TCGTCTGTGACAAAAAGCGATCTAAGTCGTCTACTTCATCTGCCTCATCA TTATTCCCGCTTGCTCCCCGGACTGTGCGCATAGTCGAAGTGGGCCCACG GGACGGCCTTCAAAATGAGCAGGCAATAATTTCCACCGAGACCAAAGTGG AGCTGATTGACAGGCTTTCTGACACCGGCCTCCAAACCATAGAAGCTACG GCGTTTGTCTCGAAAAAATGGGTTCCCCAGATGGGCGATTCCACGGAGGT GATGGCACGCATCCACAAAAAGCCCGGAGTAGGGTACCCGGTCCTCACGC CTAATTTGAAGGGTTTTGAGGATGCGCTCAGTGCAGGAGCGACAGAGGTA TCCGTATTTGGTGCAGCCTCTGAGGCATTCAGCCTAAAGAATATCAACTG CAGCGTGGCGGAGAGCTTAGATCGTTTTCAGCCTGTGATAGCTGCTGCGA AAGCTCACAAATTCAAAGTCCGTGGTTATGTCTCTTGCGTTTTAGGATGT CCATATGAAGGCAAAGTTGCACCAGAAAAGGTCGCGAAAGTGGCAAGGGC CTTGTATGATATGGGTTGTTACGAGATCTCTCTAGGAGATACAATCGGCA CGGGTACGCCAGGATCCACACGAGCCATGCTTCTCGCTACTAAAGCTTTT ATCCCAGCAGAGCATCTGGCCGTGCATTTTCACGACACATATGGGCAAGC CCTGGCCAATATTCTAACAGCTCTTCAAGAAGGCATCGGCGTAGTCGATG CCTCGGTGGCAGGTTTGGGGGGCTGCCCTTACGCTGCGGGAGCTTCGGGG AACGTAGCTACAGAGGACGTAGTGTACATGCTGCATGGCATGGGAATATG TACAGGAATCGATCTCAGCTCCCTTGCTCGGGCAGGACACTTTATCAGCG AGGCAGTTGGTCGGAACACACAGTCTaaagcaggaagggagataTTGAAA AAAAATGATCAACAGACTACCGAAAAGTAAATGCTGGCATGTAGATTACA AGCAGTATCATGCCGCCGTTTGGCTCCTTACCCTTTGTACCCCGTTTTGT CAATGACTCTCTGCCTCGTCTGTGACAAAAAGCGATCTAAGTCGTCTACT TCATCTGCCTCATCATTATTCCCGCTTGCTCCCCGGACTGTGCGCATAGT CGAAGTGGGCCCACGGGACGGCCTTCAAAATGAGCAGGCAATAATTTCCA CCGAGACCAAAGTGGAGCTGATTGACAGGCTTTCTGACACCGGCCTCCAA ACCATAGAAGCTACGGCGTTTGTCTCGAAAAAATGGGTTCCCCAGATGGG CGATTCCACGGAGGTGATGGCACGCATCCACAAAAAGCCCGGAGTAGGGT ACCCGGTCCTCACGCCTAATTTGAAGGGTTTTGAGGATGCGCTCAGTGCA GGAGCGACAGAGGTATCCGTATTTGGTGCAGCCTCTGAGGCATTCAGCCT AAAGAATATCAACTGCAGCGTGGCGGAGAGCTTAGATCGTTTTCAGCCTG TGATAGCTGCTGCGAAAGCTCACAAATTCAAAGTCCGTGGTTATGTCTCT TGCGTTTTAGGATGTCCATATGAAGGCAAAGTTGCACCAGAAAAGGTCGC GAAAGTGGCAAGGGCCTTGTATGATATGGGTTGTTACGAGATCTCTCTAG GAGATACAATCGGCACGGGTACGCCAGGATCCACACGAGCCATGCTTCTC GCTACTAAAGCTTTTATCCCAGCAGAGCATCTGGCCGTGCATTTTCACGA CACATATGGGCAAGCCCTGGCCAATATTCTAACAGCTCTTCAAGAAGGCA TCGGCGTAGTCGATGCCTCGGTGGCAGGTTTGGGGGGCTGCCCTTACGCT GCGGGAGCTTCGGGGAACGTAGCTACAGAGGACGTAGTGTACATGCTGCA TGGCATGGGAATATGTACAGGAATCGATCTCAGCTCCCTTGCTCGGGCAG GACACTTTATCAGCGAGGCAGTTGGTCGGAACACACAGTCTaaagcagga agggagataTTGAAAAAAAATGATCAACAGACTACCGAAAAGTAAATGCT GGCATGTAGATTACAAGCAGTATCATGCCGCCGTTTGGCTCCTTACCCTT TGTACCCCGTTTTGTCAATGACTCTCTGCCTCGTCTGTGACAAAAAGCGA TCTAAGTCGTCTACTTCATCTGCCTCATCATTATTCCCGCTTGCTCCCCG GACTGTGCGCATAGTCGAAGTGGGCCCACGGGACGGCCTTCAAAATGAGC AGGCAATAATTTCCACCGAGACCAAAGTGGAGCTGATTGACAGGCTTTCT GACACCGGCCTCCAAACCATAGAAGCTACGGCGTTTGTCTCGAAAAAATG GGTTCCCCAGATGGGCGATTCCACGGAGGTGATGGCACGCATCCACAAAA AGCCCGGAGTAGGGTACCCGGTCCTCACGCCTAATTTGAAGGGTTTTGAG GATGCGCTCAGTGCAGGAGCGACAGAGGTATCCGTATTTGGTGCAGCCTC TGAGGCATTCAGCCTAAAGAATATCAACTGCAGCGTGGCGGAGAGCTTAG ATCGTTTTCAGCCTGTGATAGCTGCTGCGAAAGCTCACAAATTCAAAGTC CGTGGTTATGTCTCTTGCGTTTTAGGATGTCCATATGAAGGCAAAGTTGC ACCAGAAAAGGTCGCGAAAGTGGCAAGGGCCTTGTATGATATGGGTTGTT ACGAGATCTCTCTAGGAGATACAATCGGCACGGGTACGCCAGGATCCACA CGAGCCATGCTTCTCGCTACTAAAGCTTTTATCCCAGCAGAGCATCTGGC CGTGCATTTTCACGACACATATGGGCAAGCCCTGGCCAATATTCTAACAG CTCTTCAAGAAGGCATCGGCGTAGTCGATGCCTCGGTGGCAGGTTTGGGG GGCTGCCCTTACGCTGCGGGAGCTTCGGGGAACGTAGCTACAGAGGACGT AGTGTACATGCTGCATGGCATGGGAATATGTACAGGAATCGATCTCAGCT CCCTTGCTCGGGCAGGACACTTTATCAGCGAGGCAGTTGGTCGGAACACA CAGTCTaaagcaggaagggagataTTGAAAAAAAATGATCAACAGACTAC CGAAAAGTAAATGCTGGCATGTAGATTACAAGCAGTATCATGCCGCCGTT TGGCTCCTTACCCTTTGTACCCCGTTTTGTCAATGACTCTCTGCCTCGTC TGTGACAAAAAGCGATCTAAGTCGTCTACTTCATCTGCCTCATCATTATT CCCGCTTGCTCCCCGGACTGTGCGCATAGTCGAAGTGGGCCCACGGGACG GCCTTCAAAATGAGCAGGCAATAATTTCCACCGAGACCAAAGTGGAGCTG ATTGACAGGCTTTCTGACACCGGCCTCCAAACCATAGAAGCTACGGCGTT TGTCTCGAAAAAATGGGTTCCCCAGATGGGCGATTCCACGGAGGTGATGG CACGCATCCACAAAAAGCCCGGAGTAGGGTACCCGGTCCTCACGCCTAAT TTGAAGGGTTTTGAGGATGCGCTCAGTGCAGGAGCGACAGAGGTATCCGT ATTTGGTGCAGCCTCTGAGGCATTCAGCCTAAAGAATATCAACTGCAGCG TGGCGGAGAGCTTAGATCGTTTTCAGCCTGTGATAGCTGCTGCGAAAGCT CACAAATTCAAAGTCCGTGGTTATGTCTCTTGCGTTTTAGGATGTCCATA TGAAGGCAAAGTTGCACCAGAAAAGGTCGCGAAAGTGGCAAGGGCCTTGT ATGATATGGGTTGTTACGAGATCTCTCTAGGAGATACAATCGGCACGGGT ACGCCAGGATCCACACGAGCCATGCTTCTCGCTACTAAAGCTTTTATCCC AGCAGAGCATCTGGCCGTGCATTTTCACGACACATATGGGCAAGCCCTGG CCAATATTCTAACAGCTCTTCAAGAAGGCATCGGCGTAGTCGATGCCTCG GTGGCAGGTTTGGGGGGCTGCCCTTACGCTGCGGGAGCTTCGGGGAACGT AGCTACAGAGGACGTAGTGTACATGCTGCATGGCATGGGAATATGTACAG GAATCGATCTCAGCTCCCTTGCTCGGGCAGGACACTTTATCAGCGAGGCA GTTGGTCGGAACACACAGTCTaaagcaggaagggagataTTGAAAAAAAA TGATCAACAGACTACCGAAAAGTAAATGCTGGCATGTAGATTACAAGCAG TATCATGCCGCCGTTTGGCTCCTTACCCTTTGTACCCCGTTTTGTCAATG ACTCTCTGCCTCGTCTGTGACAAAAAGCGATCTAAGTCGTCTACTTCATC TGCCTCATCATTATTCCCGCTTGCTCCCCGGACTGTGCGCATAGTCGAAG TGGGCCCACGGGACGGCCTTCAAAATGAGCAGGCAATAATTTCCACCGAG ACCAAAGTGGAGCTGATTGACAGGCTTTCTGACACCGGCCTCCAAACCAT AGAAGCTACGGCGTTTGTCTCGAAAAAATGGGTTCCCCAGATGGGCGATT CCACGGAGGTGATGGCACGCATCCACAAAAAGCCCGGAGTAGGGTACCCG GTCCTCACGCCTAATTTGAAGGGTTTTGAGGATGCGCTCAGTGCAGGAGC GACAGAGGTATCCGTATTTGGTGCAGCCTCTGAGGCATTCAGCCTAAAGA ATATCAACTGCAGCGTGGCGGAGAGCTTAGATCGTTTTCAGCCTGTGATA GCTGCTGCGAAAGCTCACAAATTCAAAGTCCGTGGTTATGTCTCTTGCGT TTTAGGATGTCCATATGAAGGCAAAGTTGCACCAGAAAAGGTCGCGAAAG TGGCAAGGGCCTTGTATGATATGGGTTGTTACGAGATCTCTCTAGGAGAT ACAATCGGCACGGGTACGCCAGGATCCACACGAGCCATGCTTCTCGCTAC TAAAGCTTTTATCCCAGCAGAGCATCTGGCCGTGCATTTTCACGACACAT ATGGGCAAGCCCTGGCCAATATTCTAACAGCTCTTCAAGAAGGCATCGGC GTAGTCGATGCCTCGGTGGCAGGTTTGGGGGGCTGCCCTTACGCTGCGGG AGCTTCGGGGAACGTAGCTACAGAGGACGTAGTGTACATGCTGCATGGCA TGGGAATATGTACAGGAATCGATCTCAGCTCCCTTGCTCGGGCAGGACAC TTTATCAGCGAGGCAGTTGGTCGGAACACACAGTCTaaagcaggaaggga gataTTGAAAAAAAATGATCAACAGACTACCGAAAAGTAAATGCTGGCAT GTAGATTACAAGCAGTATCATGCCGCCGTTTGGCTCCTTACCCTTTGTAC CCCGTTTTGTCAATGACTCTCTGCCTCGTCTGTGACAAAAAGCGATCTAA GTCGTCTACTTCATCTGCCTCATCATTATTCCCGCTTGCTCCCCGGACTG TGCGCATAGTCGAAGTGGGCCCACGGGACGGCCTTCAAAATGAGCAGGCA ATAATTTCCACCGAGACCAAAGTGGAGCTGATTGACAGGCTTTCTGACAC CGGCCTCCAAACCATAGAAGCTACGGCGTTTGTCTCGAAAAAATGGGTTC CCCAGATGGGCGATTCCACGGAGGTGATGGCACGCATCCACAAAAAGCCC GGAGTAGGGTACCCGGTCCTCACGCCTAATTTGAAGGGTTTTGAGGATGC GCTCAGTGCAGGAGCGACAGAGGTATCCGTATTTGGTGCAGCCTCTGAGG CATTCAGCCTAAAGAATATCAACTGCAGCGTGGCGGAGAGCTTAGATCGT TTTCAGCCTGTGATAGCTGCTGCGAAAGCTCACAAATTCAAAGTCCGTGG TTATGTCTCTTGCGTTTTAGGATGTCCATATGAAGGCAAAGTTGCACCAG AAAAGGTCGCGAAAGTGGCAAGGGCCTTGTATGATATGGGTTGTTACGAG ATCTCTCTAGGAGATACAATCGGCACGGGTACGCCAGGATCCACACGAGC CATGCTTCTCGCTACTAAAGCTTTTATCCCAGCAGAGCATCTGGCCGTGC ATTTTCACGACACATATGGGCAAGCCCTGGCCAATATTCTAACAGCTCTT CAAGAAGGCATCGGCGTAGTCGATGCCTCGGTGGCAGGTTTGGGGGGCTG CCCTTACGCTGCGGGAGCTTCGGGGAACGTAGCTACAGAGGACGTAGTGT ACATGCTGCATGGCATGGGAATATGTACAGGAATCGATCTCAGCTCCCTT GCTCGGGCAGGACACTTTATCAGCGAGGCAGTTGGTCGGAACACACAGTC TaaagcaggaagggagataTTGAAAAAAAATGATCAACAGACTACCGAAA AGTAA back to top
|