EWM28707.1, cds1940 (CDS) Nannochloropsis gaditana

Overview
NameEWM28707.1
Unique Namecds1940
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:532255..532428 +
Alignment locationCM002458.1:532529..532602 +
Alignment locationCM002458.1:532844..532991 +
Alignment locationCM002458.1:533097..533188 +
Alignment locationCM002458.1:533323..533531 +
Alignment locationCM002458.1:533638..533745 +
Alignment locationCM002458.1:533843..534102 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28707.1
Producthydroxymethylglutaryl- lyase
Orig transcript idgnl|cribi|Naga_100002g74.4826.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:532255..532428 +
CM002458.1supercontigCM002458.1:532529..532602 +
CM002458.1supercontigCM002458.1:532844..532991 +
CM002458.1supercontigCM002458.1:533097..533188 +
CM002458.1supercontigCM002458.1:533323..533531 +
CM002458.1supercontigCM002458.1:533638..533745 +
CM002458.1supercontigCM002458.1:533843..534102 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
Vocabulary: Molecular Function
TermDefinition
GO:0004419hydroxymethylglutaryl-CoA lyase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR000138HMG_CoA_lyase_AS
IPR000891PYR_CT
IPR013785Aldolase_TIM
Homology
BLAST of EWM28707.1 vs. NCBI_GenBank
Match: gi|585111130|gb|EWM28707.1| (hydroxymethylglutaryl- lyase [Nannochloropsis gaditana])

HSP 1 Score: 728.783 bits (1880), Expect = 0.000e+0
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0
Query:    1 MLACRLQAVSCRRLAPYPLYPVLSMTLCLVCDKKRSKSSTSSASSLFPLAPRTVRIVEVGPRDGLQNEQAIISTETKVELIDRLSDTGLQTIEATAFVSKKWVPQMGDSTEVMARIHKKPGVGYPVLTPNLKGFEDALSAGATEVSVFGAASEAFSLKNINCSVAESLDRFQPVIAAAKAHKFKVRGYVSCVLGCPYEGKVAPEKVAKVARALYDMGCYEISLGDTIGTGTPGSTRAMLLATKAFIPAEHLAVHFHDTYGQALANILTALQEGIGVVDASVAGLGGCPYAAGASGNVATEDVVYMLHGMGICTGIDLSSLARAGHFISEAVGRNTQSKAGREILKKNDQQTTEK 354
            MLACRLQAVSCRRLAPYPLYPVLSMTLCLVCDKKRSKSSTSSASSLFPLAPRTVRIVEVGPRDGLQNEQAIISTETKVELIDRLSDTGLQTIEATAFVSKKWVPQMGDSTEVMARIHKKPGVGYPVLTPNLKGFEDALSAGATEVSVFGAASEAFSLKNINCSVAESLDRFQPVIAAAKAHKFKVRGYVSCVLGCPYEGKVAPEKVAKVARALYDMGCYEISLGDTIGTGTPGSTRAMLLATKAFIPAEHLAVHFHDTYGQALANILTALQEGIGVVDASVAGLGGCPYAAGASGNVATEDVVYMLHGMGICTGIDLSSLARAGHFISEAVGRNTQSKAGREILKKNDQQTTEK
Sbjct:    1 MLACRLQAVSCRRLAPYPLYPVLSMTLCLVCDKKRSKSSTSSASSLFPLAPRTVRIVEVGPRDGLQNEQAIISTETKVELIDRLSDTGLQTIEATAFVSKKWVPQMGDSTEVMARIHKKPGVGYPVLTPNLKGFEDALSAGATEVSVFGAASEAFSLKNINCSVAESLDRFQPVIAAAKAHKFKVRGYVSCVLGCPYEGKVAPEKVAKVARALYDMGCYEISLGDTIGTGTPGSTRAMLLATKAFIPAEHLAVHFHDTYGQALANILTALQEGIGVVDASVAGLGGCPYAAGASGNVATEDVVYMLHGMGICTGIDLSSLARAGHFISEAVGRNTQSKAGREILKKNDQQTTEK 354          
BLAST of EWM28707.1 vs. NCBI_GenBank
Match: gi|1016259189|ref|WP_062959495.1| (hydroxymethylglutaryl-CoA lyase [Thalassospira xiamenensis] >gi|1016005470|gb|KZB54669.1| hydroxymethylglutaryl-CoA lyase [Thalassospira xiamenensis])

HSP 1 Score: 432.565 bits (1111), Expect = 2.120e-149
Identity = 206/303 (67.99%), Postives = 244/303 (80.53%), Query Frame = 0
Query:   46 LFPLAPRTVRIVEVGPRDGLQNEQAIISTETKVELIDRLSDTGLQTIEATAFVSKKWVPQMGDSTEVMARIHKKPGVGYPVLTPNLKGFEDALSAGATEVSVFGAASEAFSLKNINCSVAESLDRFQPVIAAAKAHKFKVRGYVSCVLGCPYEGKVAPEKVAKVARALYDMGCYEISLGDTIGTGTPGSTRAMLLATKAFIPAEHLAVHFHDTYGQALANILTALQEGIGVVDASVAGLGGCPYAAGASGNVATEDVVYMLHGMGICTGIDLSSLARAGHFISEAVGRNTQSKAGREILKKND 348
            LF L P  V+IVEVGPRDGLQNE+ ++ST+ KVELI RL D GL  IEATAFVS KWVPQM D+++VM RI +KPGV YPVL PNLKG E A+ AGATEV+VFGAASE+FS KNINCS+AESLDRF+PV++AA+     VRGYVSCVLGCPYEG++AP+KVA VA+AL+DMG YEISLGDTIGTGTPG ++AM+ A    +  E+LA HFHDTYGQALAN+L  LQ GI  +D+SVAGLGGCPYA GASGNVATEDVVYML+G+GI TG+DL  LA  G +I+  +GR + SKA   +  K D
Sbjct:    4 LFGL-PEQVKIVEVGPRDGLQNEKTMVSTDIKVELIHRLCDAGLSVIEATAFVSPKWVPQMADASDVMTRISRKPGVTYPVLAPNLKGLESAIEAGATEVAVFGAASESFSQKNINCSIAESLDRFRPVVSAARDANITVRGYVSCVLGCPYEGEIAPQKVADVAKALFDMGAYEISLGDTIGTGTPGKSQAMIEAVATHVAIENLAAHFHDTYGQALANLLAVLQMGIATIDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGIETGVDLEKLAETGSWITAKIGRASGSKANLALAAKRD 305          
BLAST of EWM28707.1 vs. NCBI_GenBank
Match: gi|696534388|ref|WP_033067578.1| (hydroxymethylglutaryl-CoA lyase [Thalassospira australica])

HSP 1 Score: 432.18 bits (1110), Expect = 2.288e-149
Identity = 201/288 (69.79%), Postives = 239/288 (82.99%), Query Frame = 0
Query:   51 PRTVRIVEVGPRDGLQNEQAIISTETKVELIDRLSDTGLQTIEATAFVSKKWVPQMGDSTEVMARIHKKPGVGYPVLTPNLKGFEDALSAGATEVSVFGAASEAFSLKNINCSVAESLDRFQPVIAAAKAHKFKVRGYVSCVLGCPYEGKVAPEKVAKVARALYDMGCYEISLGDTIGTGTPGSTRAMLLATKAFIPAEHLAVHFHDTYGQALANILTALQEGIGVVDASVAGLGGCPYAAGASGNVATEDVVYMLHGMGICTGIDLSSLARAGHFISEAVGRNTQSK 338
            PR V+IVEVGPRDGLQNE+A++ T TKVELI RL+D GL  IEATAFVS KWVPQM D+ +VMA+I +KPGV YPVLTPN+KG E A+++GATEV+VFGAASE+FS KNINCS+AESLDRF+PV  AA+     VRGYVSCVLGCPYEG +APEKVA+VA+ALYDMGCYEISLGDTIGTGTP   +AM+ A    +P E +A HFHDTYGQALAN+L  LQ G+  +D+SVAGLGGCPYA GASGNVATEDVVYML+G+GI TGIDL  L + G +I + +G+++ SK
Sbjct:    8 PRRVKIVEVGPRDGLQNEKAMVPTNTKVELIHRLNDAGLSVIEATAFVSPKWVPQMADAPDVMAQIDRKPGVTYPVLTPNMKGLEAAIASGATEVAVFGAASESFSQKNINCSIAESLDRFRPVADAAREGGLAVRGYVSCVLGCPYEGDIAPEKVAEVAKALYDMGCYEISLGDTIGTGTPAKAQAMITAVAKHVPIEKIAAHFHDTYGQALANLLAVLQMGVATIDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGIETGIDLEKLTKTGSWICDQIGKSSASK 295          
BLAST of EWM28707.1 vs. NCBI_GenBank
Match: gi|550982193|ref|WP_022730293.1| (hydroxymethylglutaryl-CoA lyase [Thalassospira lucentensis])

HSP 1 Score: 431.795 bits (1109), Expect = 3.283e-149
Identity = 204/296 (68.92%), Postives = 241/296 (81.42%), Query Frame = 0
Query:   51 PRTVRIVEVGPRDGLQNEQAIISTETKVELIDRLSDTGLQTIEATAFVSKKWVPQMGDSTEVMARIHKKPGVGYPVLTPNLKGFEDALSAGATEVSVFGAASEAFSLKNINCSVAESLDRFQPVIAAAKAHKFKVRGYVSCVLGCPYEGKVAPEKVAKVARALYDMGCYEISLGDTIGTGTPGSTRAMLLATKAFIPAEHLAVHFHDTYGQALANILTALQEGIGVVDASVAGLGGCPYAAGASGNVATEDVVYMLHGMGICTGIDLSSLARAGHFISEAVGRNTQSKAGREILKK 346
            P  V+IVEVGPRDGLQNE+ +++T TKVELI+RL+D GL  IEATAFVS KWVPQM D++EVMA+I +K GV YPVLTPN KG E A++AGATEV+VFGAASE+FS KNINCS+AESLDRF+P++ AA+     VRGYVSCVLGCPYEG +APEKVA+VA+ALYDMGCYEISLGDTIGTGTP   + M+ A    IP E +A HFHDTYGQALAN+L  L+ G+  VD+SVAGLGGCPYA GASGNVATEDVVYML+G+GI TGIDL  LA  G +I + +GR++ SKA   I  K
Sbjct:    8 PTNVKIVEVGPRDGLQNEKTMVATATKVELINRLNDAGLSVIEATAFVSPKWVPQMADASEVMAKITRKSGVTYPVLTPNTKGLEAAITAGATEVAVFGAASESFSQKNINCSIAESLDRFRPLVIAARDAGLSVRGYVSCVLGCPYEGDIAPEKVAEVAKALYDMGCYEISLGDTIGTGTPAKAQTMISAVTEHIPIEKIAAHFHDTYGQALANLLAVLELGVATVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGIKTGIDLEKLAATGSWICDQIGRSSASKANLAIGAK 303          
BLAST of EWM28707.1 vs. NCBI_GenBank
Match: gi|673017126|ref|XP_008862524.1| (hypothetical protein H310_01244 [Aphanomyces invadans] >gi|574481727|gb|ETW08719.1| hypothetical protein H310_01244 [Aphanomyces invadans])

HSP 1 Score: 432.18 bits (1110), Expect = 3.346e-149
Identity = 205/295 (69.49%), Postives = 237/295 (80.34%), Query Frame = 0
Query:   51 PRTVRIVEVGPRDGLQNEQAIISTETKVELIDRLSDTGLQTIEATAFVSKKWVPQMGDSTEVMARIHKKPGVGYPVLTPNLKGFEDALSAGATEVSVFGAASEAFSLKNINCSVAESLDRFQPVIAAAKAHKFKVRGYVSCVLGCPYEGKVAPEKVAKVARALYDMGCYEISLGDTIGTGTPGSTRAMLLATKAFIPAEHLAVHFHDTYGQALANILTALQEGIGVVDASVAGLGGCPYAAGASGNVATEDVVYMLHGMGICTGIDLSSLARAGHFISEAVGRNTQSKAGREILK 345
            P  V+IVEVGPRDGLQNE+ ++STE KV+LI+ LS+ GL  +EAT+FVS KWVPQMGD+ EVM +I++K GV YPVLTPNL GFE A+   A EV++FGAASE+FS KNINCS+ ESLDRFQPV   A++   +VRGYVSCVLGCPYEG + P  VAKVA+ L DMGCYEISLGDTIG GTPGST  ML ATK  +P E LAVHFHDTYGQALANIL ALQEG+ VVD++VAGLGGCPYA GASGNVATEDVVYMLHG+GI TG+DL  L  AG FIS  +GR T S+  R + K
Sbjct:   18 PSYVKIVEVGPRDGLQNEKTVVSTEDKVKLINLLSEAGLPVVEATSFVSPKWVPQMGDNAEVMKQINRKEGVYYPVLTPNLTGFEAAIKVNAHEVAIFGAASESFSRKNINCSIQESLDRFQPVCVRAQSLGVRVRGYVSCVLGCPYEGPIKPSTVAKVAKTLLDMGCYEISLGDTIGIGTPGSTLKMLQATKEVVPVEQLAVHFHDTYGQALANILVALQEGVSVVDSAVAGLGGCPYAKGASGNVATEDVVYMLHGLGIKTGVDLDKLLSAGDFISSVLGRPTNSRVARAMQK 312          
BLAST of EWM28707.1 vs. NCBI_GenBank
Match: gi|1189218438|ref|WP_085644469.1| (hydroxymethylglutaryl-CoA lyase [Thalassospira sp. MCCC 1A03138] >gi|1187731261|gb|OSQ30206.1| hydroxymethylglutaryl-CoA lyase [Thalassospira sp. MCCC 1A03138])

HSP 1 Score: 431.795 bits (1109), Expect = 4.086e-149
Identity = 203/298 (68.12%), Postives = 242/298 (81.21%), Query Frame = 0
Query:   51 PRTVRIVEVGPRDGLQNEQAIISTETKVELIDRLSDTGLQTIEATAFVSKKWVPQMGDSTEVMARIHKKPGVGYPVLTPNLKGFEDALSAGATEVSVFGAASEAFSLKNINCSVAESLDRFQPVIAAAKAHKFKVRGYVSCVLGCPYEGKVAPEKVAKVARALYDMGCYEISLGDTIGTGTPGSTRAMLLATKAFIPAEHLAVHFHDTYGQALANILTALQEGIGVVDASVAGLGGCPYAAGASGNVATEDVVYMLHGMGICTGIDLSSLARAGHFISEAVGRNTQSKAGREILKKND 348
            P  V+IVEVGPRDGLQNE+ ++ST+ KVELI RL D GL  IEATAFVS KWVPQM D+++VMARI +KPGV YPVL PNLKG E A+ AG TEV+VFGAASE+FS KNINCS+AESLDRF+PV++AA+     VRGY+SCVLGCPYEG++AP+KVA VA+AL+DMG YEISLGDTIGTGTPG  +AM+ A  + +  E+LA HFHDTYGQALAN+L  LQ GI  +D+SVAGLGGCPYA GASGNVATEDVVYML+G+GI TGIDL  LA+ G +I+  +GR + SKA   +  K D
Sbjct:    8 PEQVKIVEVGPRDGLQNEKTMVSTDIKVELIHRLCDAGLLVIEATAFVSPKWVPQMADASDVMARISRKPGVTYPVLVPNLKGLEAAIEAGVTEVAVFGAASESFSQKNINCSIAESLDRFRPVVSAARDANIAVRGYISCVLGCPYEGEIAPQKVADVAKALFDMGAYEISLGDTIGTGTPGKAQAMIEAVASHVAIENLAAHFHDTYGQALANLLAVLQMGIATIDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGIDTGIDLEKLAKTGSWITGKIGRQSGSKANLALAAKRD 305          
BLAST of EWM28707.1 vs. NCBI_GenBank
Match: gi|1016246434|ref|WP_062952059.1| (hydroxymethylglutaryl-CoA lyase [Thalassospira lucentensis] >gi|1016015102|gb|KZB64078.1| hydroxymethylglutaryl-CoA lyase [Thalassospira lucentensis])

HSP 1 Score: 431.024 bits (1107), Expect = 7.138e-149
Identity = 202/298 (67.79%), Postives = 242/298 (81.21%), Query Frame = 0
Query:   51 PRTVRIVEVGPRDGLQNEQAIISTETKVELIDRLSDTGLQTIEATAFVSKKWVPQMGDSTEVMARIHKKPGVGYPVLTPNLKGFEDALSAGATEVSVFGAASEAFSLKNINCSVAESLDRFQPVIAAAKAHKFKVRGYVSCVLGCPYEGKVAPEKVAKVARALYDMGCYEISLGDTIGTGTPGSTRAMLLATKAFIPAEHLAVHFHDTYGQALANILTALQEGIGVVDASVAGLGGCPYAAGASGNVATEDVVYMLHGMGICTGIDLSSLARAGHFISEAVGRNTQSKAGREILKKND 348
            P  V+IVEVGPRDGLQNE+ ++ST+ KVELI RL D GL  IEATAFVS KWVPQM D+++VMARI +KPGV YPVL PNLKG E A+ AGATEV++FGAASE+FS KNINCS+AESLDRF+PV++AA+     VRGYVSCVLGCPYEG++AP+KVA VA+AL+DMG YEISLGDTIGTGTPG  +AM+ A    +  E+LA HFHDTYGQALAN+L  L  G+  +D+SVAGLGGCPYA GASGNVATEDVVYML+G+GI TGIDL +LA+ G +I+  +GR + SKA   +  K D
Sbjct:    8 PEQVKIVEVGPRDGLQNEKNMVSTDIKVELIHRLCDAGLSVIEATAFVSPKWVPQMADASDVMARISRKPGVTYPVLAPNLKGLEAAIEAGATEVAIFGAASESFSQKNINCSIAESLDRFRPVVSAARDANIAVRGYVSCVLGCPYEGEIAPQKVADVAKALFDMGAYEISLGDTIGTGTPGKAQAMIEAVATHVAIENLAAHFHDTYGQALANLLAVLHMGVATIDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGIDTGIDLENLAKTGSWITGKIGRQSGSKANLALAAKRD 305          
BLAST of EWM28707.1 vs. NCBI_GenBank
Match: gi|1016501710|ref|WP_063088345.1| (MULTISPECIES: hydroxymethylglutaryl-CoA lyase [Thalassospira] >gi|1016454345|gb|KZC99806.1| hydroxymethylglutaryl-CoA lyase [Thalassospira sp. MCCC 1A02898] >gi|1139742523|gb|ONH86025.1| hydroxymethylglutaryl-CoA lyase [Thalassospira sp. MCCC 1A02803])

HSP 1 Score: 430.639 bits (1106), Expect = 1.261e-148
Identity = 202/288 (70.14%), Postives = 237/288 (82.29%), Query Frame = 0
Query:   51 PRTVRIVEVGPRDGLQNEQAIISTETKVELIDRLSDTGLQTIEATAFVSKKWVPQMGDSTEVMARIHKKPGVGYPVLTPNLKGFEDALSAGATEVSVFGAASEAFSLKNINCSVAESLDRFQPVIAAAKAHKFKVRGYVSCVLGCPYEGKVAPEKVAKVARALYDMGCYEISLGDTIGTGTPGSTRAMLLATKAFIPAEHLAVHFHDTYGQALANILTALQEGIGVVDASVAGLGGCPYAAGASGNVATEDVVYMLHGMGICTGIDLSSLARAGHFISEAVGRNTQSK 338
            P  V+IVEVGPRDGLQNE+A++ T TKVELI RL+D GL  IEATAFVS KWVPQM D+ +VMA+I +KPGV YPVL PN+KG E A++AGATEV+VFGAASE+FS KNINCS+AESLDRF+PV  AA+     VRGYVSCVLGCPYEG +APEKVA+VA+ALYDMGCYEISLGDTIGTGTP   +AM+ A    +P E LA HFHDTYGQALAN+L  LQ G+ V+D+SVAGLGGCPYA GASGNVATEDVVYML+G+GI TGIDL  LA  G +I + + +++ SK
Sbjct:    8 PSRVKIVEVGPRDGLQNEKAMVPTATKVELIHRLNDAGLSVIEATAFVSPKWVPQMADAPDVMAQITRKPGVTYPVLAPNMKGLEAAIAAGATEVAVFGAASESFSQKNINCSIAESLDRFRPVADAARDAGLSVRGYVSCVLGCPYEGDIAPEKVAEVAKALYDMGCYEISLGDTIGTGTPAKAQAMITAVARHVPTEKLAAHFHDTYGQALANLLAVLQMGVAVIDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGIKTGIDLEKLAETGSWICDQIAKSSASK 295          
BLAST of EWM28707.1 vs. NCBI_GenBank
Match: gi|1016257054|ref|WP_062957457.1| (hydroxymethylglutaryl-CoA lyase [Thalassospira sp. MCCC 1A01148] >gi|1016021456|gb|KZB70361.1| hydroxymethylglutaryl-CoA lyase [Thalassospira sp. MCCC 1A01148])

HSP 1 Score: 430.254 bits (1105), Expect = 1.465e-148
Identity = 203/297 (68.35%), Postives = 240/297 (80.81%), Query Frame = 0
Query:   51 PRTVRIVEVGPRDGLQNEQAIISTETKVELIDRLSDTGLQTIEATAFVSKKWVPQMGDSTEVMARIHKKPGVGYPVLTPNLKGFEDALSAGATEVSVFGAASEAFSLKNINCSVAESLDRFQPVIAAAKAHKFKVRGYVSCVLGCPYEGKVAPEKVAKVARALYDMGCYEISLGDTIGTGTPGSTRAMLLATKAFIPAEHLAVHFHDTYGQALANILTALQEGIGVVDASVAGLGGCPYAAGASGNVATEDVVYMLHGMGICTGIDLSSLARAGHFISEAVGRNTQSKAGREILKKN 347
            P  V+IVEVGPRDGLQNE+A++ T+TKVELI RL+D GL  IEATAFVS KWVPQM D+ +VMARI +KPGV YPVL PN+KG E A++AGATEV+VFGAASE+FS KNINCS+AESLDRF+PV  AA+     VRGYVSCVLGCPYEG +APEKVA+VA+ALYDMGCYEISLGDTIGTGTP   +AM+ A    +P E LA HFHDTYGQALAN+L  LQ G+  +D+SVAGLGGCPYA GASGNVATEDVVYML+G+GI T IDL  LA  G++I + +G ++ SK    +  K+
Sbjct:    8 PSHVKIVEVGPRDGLQNEKAMVPTQTKVELIHRLNDAGLSVIEATAFVSPKWVPQMADAPDVMARITRKPGVTYPVLAPNMKGLEAAIAAGATEVAVFGAASESFSQKNINCSIAESLDRFRPVADAAREAGLAVRGYVSCVLGCPYEGDIAPEKVAEVAKALYDMGCYEISLGDTIGTGTPAKAQAMIAAVAKHVPTEKLAAHFHDTYGQALANLLAVLQMGVATIDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGIKTSIDLEKLAATGNWICDLIGNSSASKVNLALRAKH 304          
BLAST of EWM28707.1 vs. NCBI_GenBank
Match: gi|1173947911|gb|OQR96080.1| (hydroxymethylglutaryl-CoA lyase, mitochondrial precursor [Achlya hypogyna])

HSP 1 Score: 429.098 bits (1102), Expect = 5.236e-148
Identity = 204/295 (69.15%), Postives = 238/295 (80.68%), Query Frame = 0
Query:   51 PRTVRIVEVGPRDGLQNEQAIISTETKVELIDRLSDTGLQTIEATAFVSKKWVPQMGDSTEVMARIHKKPGVGYPVLTPNLKGFEDALSAGATEVSVFGAASEAFSLKNINCSVAESLDRFQPVIAAAKAHKFKVRGYVSCVLGCPYEGKVAPEKVAKVARALYDMGCYEISLGDTIGTGTPGSTRAMLLATKAFIPAEHLAVHFHDTYGQALANILTALQEGIGVVDASVAGLGGCPYAAGASGNVATEDVVYMLHGMGICTGIDLSSLARAGHFISEAVGRNTQSKAGREILK 345
            PR V+IVEVGPRDGLQNE++++ST  KV LI+ LSD GL  +EAT+FVS KWVPQMGD++EVM +I +K GV YPVLTPNL GF+ A+   A EV++FGAASE+FS KNINCS+ ESL+RFQPV   AK+   +VRGYVSCVLGCPYEG + P  VAKVA+ L +MGCYEISLGDTIG GTPGST  ML ATK  +P E LAVHFHDTYGQALANIL ALQEG+ VVD++VAGLGGCPYA GASGNVATEDVVYMLHG+GI TG+DL+ +  AG FIS  + R T SKA R + K
Sbjct:   18 PRYVKIVEVGPRDGLQNEKSVVSTADKVTLINMLSDAGLPVVEATSFVSPKWVPQMGDNSEVMKQIKRKEGVYYPVLTPNLMGFDAAVKVNAQEVAIFGAASESFSRKNINCSIEESLERFQPVCEKAKSLGIRVRGYVSCVLGCPYEGPIDPATVAKVAKTLLEMGCYEISLGDTIGIGTPGSTLEMLRATKEVVPVEQLAVHFHDTYGQALANILVALQEGVTVVDSAVAGLGGCPYAKGASGNVATEDVVYMLHGLGIETGVDLAKVMEAGSFISSVLNRPTSSKAARALYK 312          
The following BLAST results are available for this feature:
BLAST of EWM28707.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111130|gb|EWM28707.1|0.000e+0100.00hydroxymethylglutaryl- lyase [Nannochloropsis gadi... [more]
gi|1016259189|ref|WP_062959495.1|2.120e-14967.99hydroxymethylglutaryl-CoA lyase [Thalassospira xia... [more]
gi|696534388|ref|WP_033067578.1|2.288e-14969.79hydroxymethylglutaryl-CoA lyase [Thalassospira aus... [more]
gi|550982193|ref|WP_022730293.1|3.283e-14968.92hydroxymethylglutaryl-CoA lyase [Thalassospira luc... [more]
gi|673017126|ref|XP_008862524.1|3.346e-14969.49hypothetical protein H310_01244 [Aphanomyces invad... [more]
gi|1189218438|ref|WP_085644469.1|4.086e-14968.12hydroxymethylglutaryl-CoA lyase [Thalassospira sp.... [more]
gi|1016246434|ref|WP_062952059.1|7.138e-14967.79hydroxymethylglutaryl-CoA lyase [Thalassospira luc... [more]
gi|1016501710|ref|WP_063088345.1|1.261e-14870.14MULTISPECIES: hydroxymethylglutaryl-CoA lyase [Tha... [more]
gi|1016257054|ref|WP_062957457.1|1.465e-14868.35hydroxymethylglutaryl-CoA lyase [Thalassospira sp.... [more]
gi|1173947911|gb|OQR96080.1|5.236e-14869.15hydroxymethylglutaryl-CoA lyase, mitochondrial pre... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1945rna1945Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications