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Properties
| Property Name | Value |
|---|
| Product | transcription factor iiia |
| Orig transcript id | gnl|cribi|Naga_100002g80.4879.mrna |
| Orig protein id | gnl|cribi|Naga_100002g80.4879 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:520169..521173 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1939 ID=rna1939|Name=rna1939|organism=Nannochloropsis gaditana|type=mRNA|length=768bp
ATGGCAAACCCATCTATGTACATATCAGGGCGCAAAAATCTGGATCTGAG
TGCTTTCCAAGTTGGAAAATGGATTCTTTCTGCACTTTTAGATGGCTTCT
TGGTGTATTTTTTAACGATTTGGACACTACCGTCCGGCGGTGGTATATAT
AATCAAGTTGATTACTACGTGCTTGGCCTGGCAATGTACGGCGTCCTCAT
CTTAAGCATGAATTGGAGACTGCTCTTCGAGTTCAAGACCATCCTTAGAC
CTGCTCTGTTGCCAAAAGCTGCGTCGAGGGATTCGTCTCGCGGCGGATGT
CAACCTCGTGCCAACTGTTCCTTTTGCGGGTGGTCGCTCTGGGTATGGCT
TGGAAGCGTGCTGTCGTTTTTCCTTGTGACGCTTGTCTACAGTAATCTGC
TTTCCTTCGCGCCGTTTTTTTATGGGGTAGCTATTGAATCCTTCAGCATG
GTCAGCGTTTGGTTACAATTACTCCTCATCCCCGTCATCTGTGTTGCGAT
TGTCGCTTTGTACACTTTTCTTGCTGATGAGTTTGCACCTTCCCCTGTCC
AGCTTGGGGTTGAAAAAGCGTATCTCTTGGTGCCTACAAGCCAAAACCAA
AAAAGACACATGTCTCAATTAGAGCCGGTAGCCGAGTCAGGCATTTTAAC
AGAACCTCCAGCAGCCATGCCACAATTAGTGGAACTCCCTACGCAGGATG
AAGACCTGGAGCAAGGAGACACAAAGCCACCTGGGACATGTCAGGAGCTA
AGTGTCCCTGCCAATTAA back to topprotein sequence of rna1939 >rna1939-protein ID=rna1939-protein|Name=rna1939|organism=Nannochloropsis gaditana|type=polypeptide|length=315bp
MQSTREKQKVGYTPDVTGKVCKREENSHEMSRPHAPTLKSILYHGLNGID
EGGRRRAEEERCKDHGRDALMKGSAGSMGGSVAHGEPDAFCIDSRIDREI
KRTDSILEVHRAPLREVFVEGEQRAECDQVTQGRHIRDEDSIQVRKQYRC
DAPHCYRSFTERRNLAQQHRKAGHSDERPFFCIVMGCDKAFKYKCVLEKH
MNSFHLDSSSMCRASKNIRIGEALSSEVMTEKLQEYNAPNTNKSVLRMLQ
AVDRSSTIERAYIRSGRGDRSFLHILRFSSFTLFTKTSFPDTDFHKPLAG
IPFGDPKLQMANIGD back to topmRNA from alignment at CM002458.1:520169..521173- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1939 ID=rna1939|Name=rna1939|organism=Nannochloropsis gaditana|type=mRNA|length=1005bp|location=Sequence derived from alignment at CM002458.1:520169..521173- (Nannochloropsis gaditana)
ATGCAATCGACACGTGAGAAACAAAAAGTAGGCTACACTCCAGATGTAAC
GGGAAAAGTGTGCAAAAGGGAAGAAAACAGTCACGAGATGTCGCGACCAC
ATGCGCCCACGCTGAAATCCATCCTGTATCACGGCTTGAATGGAATTGAC
GAGGGGGGAAGGCGAAGGGCTGAAGAAGAACGGTGCAAGGATCACGGGCG
AGATGCATTAATGAAGGGTTCCGCTGGTAGTATGGGAGGAAGCGTGGCGC
ACGGAGAACCCGATGCTTTTTGCATAGATAGCAGAATAGATAGAGAGATC
AAACGAACGGACAGCATTCTGGAAGTGCACCGTGCACCGCTGCGCGAGGT
CTTTGTTGAGGGCGAGCAGCGTGCAGAATGTGACCAAGTCACGCAGGGTC
GTCACATACGGGACGAGGACTCCATCCAGGTCCGAAAACAATATCGTTGT
GACGCACCTCATTGTTACAGGTCTTTCACGGAGAGGAGAAATCTAGCGCA
GCAGCATCGAAAGGCTGGCCACAGTGACGAACGCCCCTTTTTCTGTATTG
TCATGGGATGTGACAAAGCATTCAAATACAAGTGCGTGCTGGAGAAACAC
ATGAACTCTTTTCACTTAGATTCTTCCAGCATGTGTCGGGCATCCAAAAA
TATAAGAATAGGGGAGGCACTGTCTTCTGAAGTCATGACAGAAAAATTGC
AGGAATACAATGCGCCCAACACGAATAAGTCTGTCCTACGCATGCTGCAG
GCTGTCGATAGGTCATCGACGATGTATCGCGAACTGCTCCTGGATTATTT
GATTGGCGGGAGAGGCTAACGGTCAATGAGAGAAAGAGCATATATAAGGA
GCGGAAGAGGGGATAGGAGTTTTCTCCACATACTGAGGTTTTCTTCGTTT
ACATTATTCACGAAGACTTCTTTTCCCGATACTGATTTTCACAAACCATT
AGCTGGCATTCCCTTTGGGGATCCGAAGCTGCAAATGGCTAACATTGGCG
ATTGA back to topCoding sequence (CDS) from alignment at CM002458.1:520169..521173- >rna1939 ID=rna1939|Name=rna1939|organism=Nannochloropsis gaditana|type=CDS|length=1896bp|location=Sequence derived from alignment at CM002458.1:520169..521173- (Nannochloropsis gaditana)
AGAAAGAGCATATATAAGGAGCGGAAGAGGGGATAGGAGTTTTCTCCACA
TACTGAGGTTTTCTTCGTTTACATTATTCACGAAGACTTCTTTTCCCGAT
ACTGATTTTCACAAACCATTAGCTGGCATTCCCTTTGGGGATCCGAAGCT
GCAAATGGCTAACATTGGCGATTGAATGCAATCGACACGTGAGAAACAAA
AAGTAGGCTACACTCCAGATGTAACGGGAAAAGTGTGCAAAAGGGAAGAA
AACAGTCACGAGATGTCGCGACCACATGCGCCCACGCTGAAATCCATCCT
GTATCACGGCTTGAATGGAATTGACGAGGGGGGAAGGCGAAGGGCTGAAG
AAGAACGGTGCAAGGATCACGGGCGAGATGCATTAATGAAGGGTTCCGCT
GGTAGTATGGGAGGAAGCGTGGCGCACGGAGAACCCGATGCTTTTTGCAT
AGATAGCAGAATAGATAGAGAGATCAAACGAACGGACAGCATTCTGGAAG
TGCACCGTGCACCGCTGCGCGAGGTCTTTGTTGAGGGCGAGCAGCGTGCA
GAATGTGACCAAGTCACGCAGGGTCGTCACATACGGGACGAGGACTCCAT
CCAGGTCCGAAAACAATATCGTTGTGACGCACCTCATTGTTACAGGTCTT
TCACGGAGAGGAGAAATCTAGCGCAGCAGCATCGAAAGGCTGGCCACAGT
GACGAACGCCCCTTTTTCTGTATTGTCATGGGATGTGACAAAGCATTCAA
ATACAAGTGCGTGCTGGAGAAACACATGAACTCTTTTCACTTAGATTCTT
CCAGCATGTGTCGGGCATCCAAAAATATAAGAATAGGGGAGGCACTGTCT
TCTGAAGTCATGACAGAAAAATTGCAGGAATACAATGCGCCCAACACGAA
TAAGTCTGTCCTACGCATGCTGCAGGCTGTCGATAGGTCATCGACGATAG
AAAGAGCATATATAAGGAGCGGAAGAGGGGATAGGAGTTTTCTCCACATA
CTGAGGTTTTCTTCGTTTACATTATTCACGAAGACTTCTTTTCCCGATAC
TGATTTTCACAAACCATTAGCTGGCATTCCCTTTGGGGATCCGAAGCTGC
AAATGGCTAACATTGGCGATTGAATGCAATCGACACGTGAGAAACAAAAA
GTAGGCTACACTCCAGATGTAACGGGAAAAGTGTGCAAAAGGGAAGAAAA
CAGTCACGAGATGTCGCGACCACATGCGCCCACGCTGAAATCCATCCTGT
ATCACGGCTTGAATGGAATTGACGAGGGGGGAAGGCGAAGGGCTGAAGAA
GAACGGTGCAAGGATCACGGGCGAGATGCATTAATGAAGGGTTCCGCTGG
TAGTATGGGAGGAAGCGTGGCGCACGGAGAACCCGATGCTTTTTGCATAG
ATAGCAGAATAGATAGAGAGATCAAACGAACGGACAGCATTCTGGAAGTG
CACCGTGCACCGCTGCGCGAGGTCTTTGTTGAGGGCGAGCAGCGTGCAGA
ATGTGACCAAGTCACGCAGGGTCGTCACATACGGGACGAGGACTCCATCC
AGGTCCGAAAACAATATCGTTGTGACGCACCTCATTGTTACAGGTCTTTC
ACGGAGAGGAGAAATCTAGCGCAGCAGCATCGAAAGGCTGGCCACAGTGA
CGAACGCCCCTTTTTCTGTATTGTCATGGGATGTGACAAAGCATTCAAAT
ACAAGTGCGTGCTGGAGAAACACATGAACTCTTTTCACTTAGATTCTTCC
AGCATGTGTCGGGCATCCAAAAATATAAGAATAGGGGAGGCACTGTCTTC
TGAAGTCATGACAGAAAAATTGCAGGAATACAATGCGCCCAACACGAATA
AGTCTGTCCTACGCATGCTGCAGGCTGTCGATAGGTCATCGACGAT back to top
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