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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100002g83.4828.mrna |
| Orig protein id | gnl|cribi|Naga_100002g83.4828 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:516846..518073 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1936 ID=rna1936|Name=rna1936|organism=Nannochloropsis gaditana|type=mRNA|length=813bp
ATGGGCTTTTTGATGTTGCTGGGGACGTATACGACAATTTTTGAGACGCC
CCTCACAGCTTTCTCCACACTCTTCCCGTTGACCATCGTGTTGGGGATAT
CGATGGCTCAAGAGGCCTTCACGGACGTAAAGCGGCACCGAAGTGATGAC
GAGACAAATAATCGCATGACCAAAGTCACCAGTTGGAATACTGGTGCTGC
TGTGACAAGCGAAAGCGTGAGGTGGCGGGACGTCCACGTCGGGGACCTGC
TCTACGTGAGCAACAAGCAGCCGCTCCCGGCAGACATGGTAATCCTGGCT
ACTAGCGAAAGTGACAATATCTGCTACATCGAGACAAGCTCCATTGACGG
TGAAACAAATTTGAAGCTCCGCCGCGCCATCAACTATTTGCCGACGCATG
ACACCCCACTACTCGATCCTGCAGACGTGATCGCGCGGGTAGAGGAGGAC
CAGGCGGTCGTCCGTTGTGAGCTGCCCAACATGAAAATTGAAAGCTTTAC
GGGGACCTTCTGCATCTCTCACAAGGAGGAGCATGTATCGTCGGAAGGTG
CACCTCAGAGCGGGGATTTTAATAAAGTCATTCCTATAGACAATGAGAAT
GTCTTGCTGCGGGGGGCCATGCTGCGGAACACGCGCTGGGCAGTTGGTGT
TGTCGTCTACACAGGCAAAGATACGAAGCTGCAGCGCAACTCCCGTCATG
CCCCTTCCAAGTTAAGCAAAATCGATGTGGCGGTCAACAAGGCCATCTAT
ATGTCAGGCCCGATGGAATGGACTGGGAAAGCCGCCAATCGACATTCATT
CAGGGATTCTTAA back to topprotein sequence of rna1936 >rna1936-protein ID=rna1936-protein|Name=rna1936|organism=Nannochloropsis gaditana|type=polypeptide|length=283bp
MSADVPDVSCSKSCPSRRTLHEYPMLMAVSILSPVRTQNLTPPVARSAMV
SGTPSCSLSSIAVRPTIVRSFSRLSATLLISLGLMFEDLPVQRFSGDRPS
LSPPLHSRRRPTLNLAINFKRYLLSSTTNQLIGSLLCELHQRFLIRTFGL
VGQGILVIRISARILRKSSAGEPGAASLLRPSTRPINFALDRCTLKAHHI
LCKCSSFVAEDVLDLTQVCYNIAACLCRSIALFMVHAQILVDEVQMGISN
FYKNGFYTDAINKSSSSRRSNNGICVLTTYRNC back to topmRNA from alignment at CM002458.1:516846..518073- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1936 ID=rna1936|Name=rna1936|organism=Nannochloropsis gaditana|type=mRNA|length=1228bp|location=Sequence derived from alignment at CM002458.1:516846..518073- (Nannochloropsis gaditana)
ATGTCGGCAGATGTGCCTGACGTGAGTTGCAGCAAGAGCTGTCCTTCCCG
TAGGACCTTGCACGAATACCCAATGTTGATGGCAGTCTCCATCTTATCGC
CAGTTAGGACACAGAACTTGACGCCCCCTGTGGCTAGGTCCGCAATGGTG
TCAGGTACTCCGTCCTGCAGCTTGTCTTCTATAGCCGTGAGACCAACAAT
TGTCAGGTCTTTCTCTAGATTGTCTGCGACTTTGCTCATCAGGTCGGCGC
GGTCCCTGGCCGCGGCTGACGCCTCCCGATATGAATTGAACCACTCGGCA
TACATTGCTGGCGTCAGATCTCGGTAGCCTAGGACTAATGTTCGAAGACC
TTCCTGTGCAAAGATTTTCAGGTGATCGACCATCGTTGTCGCCGCCTCTA
CACTCCCGCAGGTCCCTCTCTGCAGCATCGCTGTGTCGGCGCCCTTGCAA
AGCAGCCTGACGCGCCCCTCCCCATCTTTGACTACTATGGACATTCTCTT
CCGATCTGAATCGAATTTATTGACTGCTAGAGGCGTCCAACTTTGAATCT
TGCCATTAATTTTAAGCGTTATTTGCTGAGTAGTACGACCAATCAGCTCA
TAGGCAGCCTCTTGTGCGAACTCCACCAACGCTTTCTCATCCGGACTTTC
GGCCTGGTAGGTCAAGGCATCCTTGTCATAAGAATTGTCACTTGCACCAT
TCATAGCGTCACTCTCTAAGACAACCGTGTGACAGAGCGCGAGGATTTTG
AGAAAATCATCAGCTGGTGAGCCTGGCGCCGCATCTCTATTAAGGCCCTC
AACGTTTATGTAGGGCAGCGTAGCGTTGGCTTCCGTCATGAGGACAGGCG
CCCCATAAACTTTGCCTTGGACAGATGCACGCTTAAAGCGCATCACATTT
TGTGTAAGTGTTCCAGTTTTGTCGCTGAAGACGTACTGGATTTGACCCAA
GTCTGTTACAATATTGCTGCGTGCCTTTGCAGGAGTATCGCTCTCTTCAT
GGTGCATGCTCAGATCCTCGTTGATGAAGTACAGATGGGCATATGTGCAC
ATCTCCATTGTAACATACATAGAAATCGGTACTATGATAGCGCAGGAAAA
AGATGACATGTTGAACGTTAGCGAATTTTTACAAAAACGGCTTCTATACA
GACGCTATCAACAAATCTAGTTCCTCACGAAGGTCCAACAATGGTATTTG
TGTCTTGACTACGTACCGAAATTGTTGA back to topCoding sequence (CDS) from alignment at CM002458.1:516846..518073- >rna1936 ID=rna1936|Name=rna1936|organism=Nannochloropsis gaditana|type=CDS|length=5112bp|location=Sequence derived from alignment at CM002458.1:516846..518073- (Nannochloropsis gaditana)
CGAATTTTTACAAAAACGGCTTCTATACAGACGCTATCAACAAATCTAGT
TCCTCACGAAGGTCCAACAATGGTATTTGTGTCTTGACTACGTACCGAAA
TTGTTGAGCGCCCCATAAACTTTGCCTTGGACAGATGCACGCTTAAAGCG
CATCACATTTTGTGTAAGTGTTCCAGTTTTGTCGCTGAAGACGTACTGGA
TTTGACCCAAGTCTGTTACAATATTGCTGCGTGCCTTTGCAGGAGTATCG
CTCTCTTCATGGTGCATGCTCAGATCCTCGTTGATGAAGTACAGATGGGC
ATATAGCGCGAGGATTTTGAGAAAATCATCAGCTGGTGAGCCTGGCGCCG
CATCTCTATTAAGGCCCTCAACGCGTCCAACTTTGAATCTTGCCATTAAT
TTTAAGCGTTATTTGCTGAGTAGTACGACCAATCAGCTCATAGGCAGCCT
CTTGTGCGAACTCCACCAACGCTTTCTCATCCGGACTTTCGGCCTGGTAG
GTCAAGGCATCCTTGTCATAAGAATTCCTAGGACTAATGTTCGAAGACCT
TCCTGTGCAAAGATTTTCAGGTGATCGACCATCGTTGTCGCCGCCTCTAC
ACTCCCGCAGATGTCGGCAGATGTGCCTGACGTGAGTTGCAGCAAGAGCT
GTCCTTCCCGTAGGACCTTGCACGAATACCCAATGTTGATGGCAGTCTCC
ATCTTATCGCCAGTTAGGACACAGAACTTGACGCCCCCTGTGGCTAGGTC
CGCAATGGTGTCAGGTACTCCGTCCTGCAGCTTGTCTTCTATAGCCGTGA
GACCAACAATTGTCAGGTCTTTCTCTAGATTGTCTGCGACTTTGCTCATC
AGCGAATTTTTACAAAAACGGCTTCTATACAGACGCTATCAACAAATCTA
GTTCCTCACGAAGGTCCAACAATGGTATTTGTGTCTTGACTACGTACCGA
AATTGTTGAGCGCCCCATAAACTTTGCCTTGGACAGATGCACGCTTAAAG
CGCATCACATTTTGTGTAAGTGTTCCAGTTTTGTCGCTGAAGACGTACTG
GATTTGACCCAAGTCTGTTACAATATTGCTGCGTGCCTTTGCAGGAGTAT
CGCTCTCTTCATGGTGCATGCTCAGATCCTCGTTGATGAAGTACAGATGG
GCATATAGCGCGAGGATTTTGAGAAAATCATCAGCTGGTGAGCCTGGCGC
CGCATCTCTATTAAGGCCCTCAACGCGTCCAACTTTGAATCTTGCCATTA
ATTTTAAGCGTTATTTGCTGAGTAGTACGACCAATCAGCTCATAGGCAGC
CTCTTGTGCGAACTCCACCAACGCTTTCTCATCCGGACTTTCGGCCTGGT
AGGTCAAGGCATCCTTGTCATAAGAATTCCTAGGACTAATGTTCGAAGAC
CTTCCTGTGCAAAGATTTTCAGGTGATCGACCATCGTTGTCGCCGCCTCT
ACACTCCCGCAGATGTCGGCAGATGTGCCTGACGTGAGTTGCAGCAAGAG
CTGTCCTTCCCGTAGGACCTTGCACGAATACCCAATGTTGATGGCAGTCT
CCATCTTATCGCCAGTTAGGACACAGAACTTGACGCCCCCTGTGGCTAGG
TCCGCAATGGTGTCAGGTACTCCGTCCTGCAGCTTGTCTTCTATAGCCGT
GAGACCAACAATTGTCAGGTCTTTCTCTAGATTGTCTGCGACTTTGCTCA
TCAGCGAATTTTTACAAAAACGGCTTCTATACAGACGCTATCAACAAATC
TAGTTCCTCACGAAGGTCCAACAATGGTATTTGTGTCTTGACTACGTACC
GAAATTGTTGAGCGCCCCATAAACTTTGCCTTGGACAGATGCACGCTTAA
AGCGCATCACATTTTGTGTAAGTGTTCCAGTTTTGTCGCTGAAGACGTAC
TGGATTTGACCCAAGTCTGTTACAATATTGCTGCGTGCCTTTGCAGGAGT
ATCGCTCTCTTCATGGTGCATGCTCAGATCCTCGTTGATGAAGTACAGAT
GGGCATATAGCGCGAGGATTTTGAGAAAATCATCAGCTGGTGAGCCTGGC
GCCGCATCTCTATTAAGGCCCTCAACGCGTCCAACTTTGAATCTTGCCAT
TAATTTTAAGCGTTATTTGCTGAGTAGTACGACCAATCAGCTCATAGGCA
GCCTCTTGTGCGAACTCCACCAACGCTTTCTCATCCGGACTTTCGGCCTG
GTAGGTCAAGGCATCCTTGTCATAAGAATTCCTAGGACTAATGTTCGAAG
ACCTTCCTGTGCAAAGATTTTCAGGTGATCGACCATCGTTGTCGCCGCCT
CTACACTCCCGCAGATGTCGGCAGATGTGCCTGACGTGAGTTGCAGCAAG
AGCTGTCCTTCCCGTAGGACCTTGCACGAATACCCAATGTTGATGGCAGT
CTCCATCTTATCGCCAGTTAGGACACAGAACTTGACGCCCCCTGTGGCTA
GGTCCGCAATGGTGTCAGGTACTCCGTCCTGCAGCTTGTCTTCTATAGCC
GTGAGACCAACAATTGTCAGGTCTTTCTCTAGATTGTCTGCGACTTTGCT
CATCAGCGAATTTTTACAAAAACGGCTTCTATACAGACGCTATCAACAAA
TCTAGTTCCTCACGAAGGTCCAACAATGGTATTTGTGTCTTGACTACGTA
CCGAAATTGTTGAGCGCCCCATAAACTTTGCCTTGGACAGATGCACGCTT
AAAGCGCATCACATTTTGTGTAAGTGTTCCAGTTTTGTCGCTGAAGACGT
ACTGGATTTGACCCAAGTCTGTTACAATATTGCTGCGTGCCTTTGCAGGA
GTATCGCTCTCTTCATGGTGCATGCTCAGATCCTCGTTGATGAAGTACAG
ATGGGCATATAGCGCGAGGATTTTGAGAAAATCATCAGCTGGTGAGCCTG
GCGCCGCATCTCTATTAAGGCCCTCAACGCGTCCAACTTTGAATCTTGCC
ATTAATTTTAAGCGTTATTTGCTGAGTAGTACGACCAATCAGCTCATAGG
CAGCCTCTTGTGCGAACTCCACCAACGCTTTCTCATCCGGACTTTCGGCC
TGGTAGGTCAAGGCATCCTTGTCATAAGAATTCCTAGGACTAATGTTCGA
AGACCTTCCTGTGCAAAGATTTTCAGGTGATCGACCATCGTTGTCGCCGC
CTCTACACTCCCGCAGATGTCGGCAGATGTGCCTGACGTGAGTTGCAGCA
AGAGCTGTCCTTCCCGTAGGACCTTGCACGAATACCCAATGTTGATGGCA
GTCTCCATCTTATCGCCAGTTAGGACACAGAACTTGACGCCCCCTGTGGC
TAGGTCCGCAATGGTGTCAGGTACTCCGTCCTGCAGCTTGTCTTCTATAG
CCGTGAGACCAACAATTGTCAGGTCTTTCTCTAGATTGTCTGCGACTTTG
CTCATCAGCGAATTTTTACAAAAACGGCTTCTATACAGACGCTATCAACA
AATCTAGTTCCTCACGAAGGTCCAACAATGGTATTTGTGTCTTGACTACG
TACCGAAATTGTTGAGCGCCCCATAAACTTTGCCTTGGACAGATGCACGC
TTAAAGCGCATCACATTTTGTGTAAGTGTTCCAGTTTTGTCGCTGAAGAC
GTACTGGATTTGACCCAAGTCTGTTACAATATTGCTGCGTGCCTTTGCAG
GAGTATCGCTCTCTTCATGGTGCATGCTCAGATCCTCGTTGATGAAGTAC
AGATGGGCATATAGCGCGAGGATTTTGAGAAAATCATCAGCTGGTGAGCC
TGGCGCCGCATCTCTATTAAGGCCCTCAACGCGTCCAACTTTGAATCTTG
CCATTAATTTTAAGCGTTATTTGCTGAGTAGTACGACCAATCAGCTCATA
GGCAGCCTCTTGTGCGAACTCCACCAACGCTTTCTCATCCGGACTTTCGG
CCTGGTAGGTCAAGGCATCCTTGTCATAAGAATTCCTAGGACTAATGTTC
GAAGACCTTCCTGTGCAAAGATTTTCAGGTGATCGACCATCGTTGTCGCC
GCCTCTACACTCCCGCAGATGTCGGCAGATGTGCCTGACGTGAGTTGCAG
CAAGAGCTGTCCTTCCCGTAGGACCTTGCACGAATACCCAATGTTGATGG
CAGTCTCCATCTTATCGCCAGTTAGGACACAGAACTTGACGCCCCCTGTG
GCTAGGTCCGCAATGGTGTCAGGTACTCCGTCCTGCAGCTTGTCTTCTAT
AGCCGTGAGACCAACAATTGTCAGGTCTTTCTCTAGATTGTCTGCGACTT
TGCTCATCAGCGAATTTTTACAAAAACGGCTTCTATACAGACGCTATCAA
CAAATCTAGTTCCTCACGAAGGTCCAACAATGGTATTTGTGTCTTGACTA
CGTACCGAAATTGTTGAGCGCCCCATAAACTTTGCCTTGGACAGATGCAC
GCTTAAAGCGCATCACATTTTGTGTAAGTGTTCCAGTTTTGTCGCTGAAG
ACGTACTGGATTTGACCCAAGTCTGTTACAATATTGCTGCGTGCCTTTGC
AGGAGTATCGCTCTCTTCATGGTGCATGCTCAGATCCTCGTTGATGAAGT
ACAGATGGGCATATAGCGCGAGGATTTTGAGAAAATCATCAGCTGGTGAG
CCTGGCGCCGCATCTCTATTAAGGCCCTCAACGCGTCCAACTTTGAATCT
TGCCATTAATTTTAAGCGTTATTTGCTGAGTAGTACGACCAATCAGCTCA
TAGGCAGCCTCTTGTGCGAACTCCACCAACGCTTTCTCATCCGGACTTTC
GGCCTGGTAGGTCAAGGCATCCTTGTCATAAGAATTCCTAGGACTAATGT
TCGAAGACCTTCCTGTGCAAAGATTTTCAGGTGATCGACCATCGTTGTCG
CCGCCTCTACACTCCCGCAGATGTCGGCAGATGTGCCTGACGTGAGTTGC
AGCAAGAGCTGTCCTTCCCGTAGGACCTTGCACGAATACCCAATGTTGAT
GGCAGTCTCCATCTTATCGCCAGTTAGGACACAGAACTTGACGCCCCCTG
TGGCTAGGTCCGCAATGGTGTCAGGTACTCCGTCCTGCAGCTTGTCTTCT
ATAGCCGTGAGACCAACAATTGTCAGGTCTTTCTCTAGATTGTCTGCGAC
TTTGCTCATCAG back to top
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