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Properties
| Property Name | Value |
|---|
| Product | phospholipid-transporting atpase id |
| Orig transcript id | gnl|cribi|Naga_100002g84.4917.mrna |
| Orig protein id | gnl|cribi|Naga_100002g84.4917 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:515801..516830 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1935 ID=rna1935|Name=rna1935|organism=Nannochloropsis gaditana|type=mRNA|length=6543bp
ATGATGCAAGCTGGAGGGTCATCATGGGTAGCGGCAGCGCGACCAGATCG
CACAAGTGTGTTTCTAGTGGACAGGAAGGTAGCCCCGCGAGTTGTCCGTG
AAGTTGCAAGCGAAGTCGGAAATTCCAGTCACTCTAGCGGTACATGCAGC
TTGGTCAGCGAATTGGAATGCAGTGGACCTATAGCTCAACTTGCCCTCAG
CTCCACTATCACGGGACACACGTTTCTGGCTGCCTTTCTTGACTCGGGTT
TGATGGAAATCTGGGATGTTGGGGCAGCCCACGGAAGCCTCTATTCGCTG
CGAGATACAGTAGTGCTGTGCGGTCCACCTGGTGAGGAGACGAGTGCCGG
GAGAAGAGTCATGAGCACTAGTGGTATTGTTGGCGGCAGGAAAAGTTTGA
GGAGCTGCGTTGATTATGTAGCCTCGAGCTCTACAGGCTTGTCGTCAGCT
ATATTTTTCACTGTTATGAGAAATCATGGAGGTCTGCCGAGCGGAAGCAA
CACACCGAACCATCTGCGTTTTGTCAAACTCACGCCCTCCGTCGACGAAG
TGAGACTGGGCTCACAGCGCCTGTCGTCTTTGGACTCTACACGCAGAAAA
TCGCATGTTCTGCATTTGACATGCCACGAATCTCGGCCCTTGCTTTGCGT
GGCTTTCCAGGATGGAGTTTTGCATTTGTATGACATCAGTCCGTTGGCTA
GAGAAGATGGCACTCAAGTCACGCCTCACTGCTCCGGCGAGGGCGAGCAA
CAGAGGGGCAGCGACTACGATGACGAGGGTGACAGCGATGTCGAAACAGG
GCAAGAGAATGACCTATCAAGCCTGGGAAGAGGTGCTAGCTCATTTTTCT
CCATCCGAGCAGCCAGAAAGCTGCTTCTTCTACCTGTGGCTGCTCTCAAG
TGTCCAGGTGACTTCCACGGCGCCCTCTCTTCTGTGTCCTTCAGCTTAGC
GCCAGAACTCGTAGTAGCCGGAAGTACACGGGGAGAAGTGGCGGTGTGGT
CGATGCAGTTGCTTCAGCGGCGTGAAGCACAGAAGGGTGACAGGTCGCTG
AGCCTGACGGGGGCTGCCTTGCCCCTGCAAACTTGCAAGCTGGCCTGTTT
GCCTGCTCGCATTGGTTGGATATCATTACTGGCAGAAAAGGGCCCTTTTT
TGTTCGCTTGCCTTCAAAAGGAGGACCATTCCTACGAGATGCAGATAGCG
GTGTTGCTGCTCCTCCCGACATCCATTGTCATGTGGGATGTAATTGCACC
TCACAAGGCGCGTTTCCTTGCTTTTCAAAGGCGTAGCTCTAATCTTGTTC
TCCTGGAGGAACATCACGACGGGGGTAGAGTATTTTTTGGAGGACTCGCT
GAGCAACTATCCCAGTCGTCGCAGATGGTGCCTTCGCGTCTGGCGGCCAT
GGGGCAACCACAGTGCATGGACCAGACATTTTCAGGAAAATTAGAAGGGA
CCTCGACTCTTAAAGTCTCACCTGTGACGTACTCATCTGTCCCCTACATC
TTCTGGATACAATCACGCCTTACATTTGCTGTTCGTCAGAGCGACTCGAA
AGCCGATAACTTAGGCAAGATGACAGTTACAACAAATAGAAAAAAAGGCC
CTCTCCCTTCTACGGGATCTTTTGTTTTTAAGGCTATCTTGGCAACTCAG
ACGCTAGAAAGCATGCAAAGAGAGAGGAATGAAGACTTATGCGATAATGA
TCCCATTGGTGCAACCTTTCTACTGCCGACTTACGGAGATGAATTTGTTG
GCTTATTATCCAGTCTTGGTGTGTCAGATTCTATGTCGCTACATTTTGGA
CTTGACGATCAGACTCTGTTGATGCCCCATTCGCTCCTTGTAAGTCCAGA
TGCATCAACGATCATTGTTTTATCCAGTATTTTGAAACCAGGGCTGAATG
ATAAGAGGGTTATGGGTGTTACGAGCCCCTTGGCTTACGTAGTGGTACGC
AGTGGATCAAGACCTTCTAGGGAAGAAGAGGAAAATCCCAAGGCTGATAC
TATCAAGCGTGGTTCATTCTGTTTTGAGGACGCGGGCCTAACATTCGATG
CTGTCTTTCTATCATCGCGCAAAATTGCTCTTCTTCAGCCTACCTTTTGT
GAGAATGCACGCAAAGGCAGCGTCACTACTGTCGTGGTCCAGCTGCAGGC
GAACAGAGAGCTTGACGATCCAAAAAAGGTTTGGAAAGTGATGCGGTGCA
CCAAAGCAGAAGATTTTGTGGGGCATGACGGATTCAAAAAACGCGCGATT
ACAAGGTTGTTGACCCCCTGTACATTCGGGGCCTCAGAGACTGGCGAGGC
CTCTGTCCATATTCTTTGTGCAGCACAAAAGAGAGCGACTTCCTTAACTC
AAGATGGCAATTACACCAACGAAGAATTGCTTAAATTGACGTTTTACGAA
GCAGCGGGAAAACACACAGATCATGCAAATGCGACACAGTCATTGTGCCT
TTTTGAAGACGAAAGGGTGATAGAAGTCCACCGTCGAACAAGCGAAGGGC
AGTGCATCGAATCTGCTATTTTTGCAGTCGCGACCTCTCAACGACTCATG
CTTCTTTCAGCGGACTTGGCTATCTTGGCCTGTGTCAAAACGTATTCAAA
ACCTTGCGGACTTGTATGGCTGGGACATACACCTGTCGTCTCTTTTGTGG
ATGGGCGAGTTCTGTACTTGAGTATAGACCCCCACGCTGACTCCATAAGT
CGTTGCGGACTCCGACATCTGTGCAGTCTCGAACAAATGCATGCTGGAGA
AGACTCGTTCCTTATTACGGCACTATCTGACCGCTTGGTGTATGCCGCAA
AGTGCGGTGAGGCTCGCGAAATTCGGGTTCTCACGCGACCTTTGTTTCCC
CTTGAACCACTGCTATTGGGCCTGCTAGCATTGCCCCATCGAGTACTATC
CACGTCGTCCACCGCTTGCTCCACCTCACGAGCCCGTAGTATAGATCAAA
GTACGATGATCGTGGGACAGATAAGGGAAGTATTGACTTGCTTCGGTCCC
CTGGCGGTACCACAAGATCGTTACGCGCGTGAAGAGGGGCCGGGCGCCAC
GACAGGTGCTACCAGCTGGACATGTGCGGCGCTCTCGCGCGCAGGATATA
ATTACTGGGCATCAGAGCTCGCAGGTGTGAGGAGTTTGTCCGATATTTTG
TGTGATGGCGAACCATTTCCTATTGTTGGAAATGCACACGAAGAGAATGT
ACGAAAATCCAGACCTTGGCTTTCATTCGCTATGACAATTGGACTTGCGG
CTCAGAGCTCGCAGTGGCGACAGGCCTTGGTCGAAGCAACGGGCGGGATT
ATTGAAAAACAGGATGAAGTTCAACAAGCGGGGGCGATGCTTCCTCCACG
ATTCCGCAGTGGCAGTCACATACTGGCGAGAGTTGGACAGCGGGCGTGGC
ACGCGGGCCAGGCCGAAGTAGCATTGAACCTGTTTGACCTAGCCGGCGAG
GATGAGAAAATGGCCGAGCTTCTACTCCTCCATGACTTGGACAGAATTCA
ATTTTCAGACGATCATACAGGTTTACTTGACAATCTGTGCGACTTAAATT
CAGCATTACAATTGATGAGGCGTCTGGTTTCGTCACAGACGTACACTTCT
GGACGTGAAATCAAACAGAACGCTGATATCGCTGATGTCGTGGGCATCAA
CCTCAGCTCACAAATATTCCCTCTTGACAAGCAAAGGCGACAGTCACTCC
TGACTGGTCTGCAAACGTCTCATCAGAACATTGTCTCTTGGCAATCCTCT
TCAACTTTCTCTAATATCGCAAACACTGCCTTGACTCCTACGCCCCAATC
TGTTGAAGGTTCCACAGCCTATTCTTGTGGCCTAGCACGCCCCATACCGG
CACGGTATTTATTGCTAAACAGTGTTGAAGAATGGTTGGGAAGGGCAGCA
CCGGAGACATTACAAGATCGGGTAGCGGGAGGGAGCGAGCTGGATGAAGA
TGCCCCACGGGGCAGGGAGGAATGGGTCAGGGGGGTGGGTGAGGGAAGGG
GAGAGGAAGACAACGCGATTCTTTACTTGAGATTCAATGATCTAAATGCT
TCGCCAATCCCTGGCGACGAATCGAGCGCACTGCTTGCCCAGATCGGGGA
CTTATCTCAGTACGGTCACACAGTTACCGTCGCTCAAGGGCAGCCGATCA
CTTGTTTGGAAAGCACGTGTCCTATCGACCAGGGGGATGGTGTAAAGGTA
CAAATGGGCATGGATGCCTTCTGGAACAGTGTAAGAGTATCAGAATGGAT
TGAGGAAGACACACCATCTGCGAGACGCGGGTTTAGTGCGCTGATTGCAC
GAGGATCTGCTCTGGATGTGGGCCCTTATCACGGGCCGCAGCAAAGCCCC
GGACGAAGTCGTCTTACGATGGAGATGTGGATTCAGCGCCCGATATCGTC
TTCGACATGTTCTACGCCAGAGATTCTGGCTGTGCGTAGGACATTGAGCA
GTAAACCTTCCTGTGTGTGGGCTTTTGGGGTGTCGGCAGATGATGCGCTA
ATGTTTTGGACAGAACGGTGTCAAACACCCTTGAGTACGGCCTCTGGCGC
GGTTCTTGGTGGTAAATGGACTCACGTTGCTTTCAGTCTCGAGATCGATG
CCTCAAATAGCAAGCAGGCATTGGTAAATCTCTTTGTGGGCGGGAAGGAC
GTATGGCCTGCCCAATTGCGAGTGGAATTTCCTTCGTTGAAAGATAGCGA
TCTTCGTCGCACAGTACTTGAAATCGGGCCCAACCTCGATGGTCATAAAA
TGACGGAAGTAAGGATGTGGGCTTGTGCACGCAGTGCGGAAGCTCTGTAC
GATAATCGTGAGAGCTATCTACAGCTAGCTGAGAGGAAAAAGAAATTGAC
CTTCAAAATAAGAAGCGATAAAAGTAAGGACAATCGGCTTGGTGACAGTG
CCACAGCGACGTCGTCACACCCGGCCTCTCTGTTGCCATTTGCGGTCGCT
GACCGCAATTTAGGCCTACCACCGTATACTTCTAGCACTGAGCCTGCCTG
TCTGTTGAACAGTAGCAACGGAAGGCGGGTGACGAGGCTGAGGGGGCCAG
AACGGGAGGCCAATGCTTCGCGAACTTCGGGGAATTTGGATGGATCTGCA
TGCGGAGGGATGGAAAATCTCTTGAATGCACTCCCTCCGCCAAGTTGTGA
TGGGACCGGACGACAACGATCAAGGCGTGGGAGTCCAAATTCGGCTAGAC
AGGTACCAACACCTTTTCCAGCTCGATCCGGTAAGGGCGACGAAGCTTCT
GGTGGACTGGGTGAGGCGAGCGAGCCATTTTCCTTGCCCTATAATAAAGC
AGCCTCGGAGGAGTTTGATTGCCTTCGTTCAACGACGGCACATCGACCCA
TATCCCCGCGACCTCTCGAGCGGCATCTTATACTCTTGCCGGAAGAATTG
GATGTCAATCCAGCCAATGTCATGCGCGACGACATGGCTGGGTATTTTGC
ATGTGGAGGACGCCACTTATGTTTCCGTGAAGAGTTTTCCTCCACAAACG
AAAACGATCAACCGCGTCAAAAGGTTGCTATCGTCGTGCTTGAAATCGCG
GCCTCGAGGGGAGGACCGTCACGCCGTGACCGTTACCCTTTTGAAGCGAG
AAGCGCTATTTTGGTTGGTGGTTTGTCTTCCTGGTCTCGTGAGACGGAGC
CTCTTCCGTCAGCGTTGATCGCTTGCTATACCCTGGCGAACACTTCACAG
AGCAATGCTTCTGCTGCAGCGGCGGGATCCAACAAAACGAGCCAAGCCGG
TGTGCTGCAGGTGTACGATCTTGTGCTCCGAAAGAGTGTGGCCCGACAGC
CTGTCCAGACGACGTTACACTTCTGGCGCTGGCTTGACCGAGGATGTATT
GCATTGGTCACGCAGCGGTCTGTCTTCACCTGGGTATTGAATTTGGAAGG
GGGAAGTTCACGCGCTCCCACAAAGTTGTTTGACCGGCTTGATTTGAGTA
GTTCGGGCATTGACTCAAAAGTGCGTGAGTACTGCCATTCAGTGGAAACA
GGCTGGGGAGTCCTTACAACTGTTGACTCTGAGCAATGTCGGCTGGCCAT
TCAATTACATGAATTTTCCACCGGCAAGGCACTGTTTTTAACTGATGCAG
ATTTATTGGGCGCGAATGTGTGCGACTGCGGCGTTGCAGGTCATGGAGGA
AGCAAAGTCTGCCTTGTCCTTCTTCGGAGTGCTCCAGCTTTGTGTGTTGA
CCTTTGCACAATTTGTGAGGAGGGCGACCGAGACAATACGCAGGACGTTT
GCCTGGATAGATTAGTCCGAATATTCTTGCCTTCCACTCCTTCGCGTGTT
GCGCCTGCAGGACGTGCATGGGTGGTAGGCCCGGCTGGTCCTACAGGCGT
GCTTTCGATTCTGTTCGCCGCGAAAGGCCACTTATACACGCTCGACCTTA
TAACACATGAAATTCAAGCTAGGGGCTCAGTTTTTCCAGATGGAAGGAGT
TCCGTTTCAGATGTCGATTTGGACGCGACAAGCGGAGATTTGTTGATATT
AGATCATGAACGCTTAGCCGTCTTCAGAATTAGCAACTTATGA back to topprotein sequence of rna1935 >rna1935-protein ID=rna1935-protein|Name=rna1935|organism=Nannochloropsis gaditana|type=polypeptide|length=270bp
MGFLMLLGTYTTIFETPLTAFSTLFPLTIVLGISMAQEAFTDVKRHRSDD
ETNNRMTKVTSWNTGAAVTSESVRWRDVHVGDLLYVSNKQPLPADMVILA
TSESDNICYIETSSIDGETNLKLRRAINYLPTHDTPLLDPADVIARVEED
QAVVRCELPNMKIESFTGTFCISHKEEHVSSEGAPQSGDFNKVIPIDNEN
VLLRGAMLRNTRWAVGVVVYTGKDTKLQRNSRHAPSKLSKIDVAVNKAIY
MSGPMEWTGKAANRHSFRDS back to topmRNA from alignment at CM002458.1:515801..516830+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1935 ID=rna1935|Name=rna1935|organism=Nannochloropsis gaditana|type=mRNA|length=1030bp|location=Sequence derived from alignment at CM002458.1:515801..516830+ (Nannochloropsis gaditana)
ATGGGCTTTTTGATGTTGCTGGGGACGTATACGACAATTTTTGAGACGCC
CCTCACAGCTTTCTCCACACTCTTCCCGTTGACCATCGTGTTGGGGATAT
CGATGGCTCAAGAGGCCTTCACGGACGTAAAGCGGCACCGAAGTGATGAC
GAGACAAATAATCGCATGACCAAAGTCACCAGTTGGAATACTGGTGCTGC
TGTGACAAGCGAAAGCGTGAGGTGGCGGGACGTCCACGTCGGGGACCTGC
TCTACGTGAGCAACAAGCAGCCGCTCCCGGCAGACATGGTAATCCTGGCT
ACTAGCGAAAGTGACAATATCTGCTACATCGAGACAAGCTCCATTGACGG
TGAAACAAATTTGAAGCTCCGCCGCGCCATCAACTATTTGCCGACGCATG
ACACCCCACTACTCGATCCTGCAGACGTGATCGCGCGggtagaggaggac
caggcggtCGTCCGTTGTGAGCTGCCCAACATGAAAATTGAAAGCTTTAC
GGGGACCTTCTGCATCTCTcacaaggaggagcatgTATCGTCGGAAGGTG
CACCTCAGAGCGGGGATTTTAATAAAGTCATTCCTATAGACAATGAGAAT
GTCTTGCTGCGGGGGGCCATGCTGCGGAACACGCGCTGGGCAGTTGGTGT
TGTCGTCTACACAGGCAAAGATACGAAGCTGCAGGTAAATTAAAGCAATC
GCGATGCATCTCTTCTGTCCTTTCTCTTACTCGGGACCCCGCTTTACCAT
CTTCGAATGCCACAACAGCGCAACTCCCGTCATGCCCCTTCCAAGTTAAG
CAAAATCGATGTGGCGGTCAACAAGGCCATCTATATGGTTTTTCTGACAG
ATGTGATATTAGTGCTTGTATCAacattccttctcctccagttTGAAGAC
GCCTACTTTTCAACGCTCACTTACCTGGGGTTCTACTCCCCCGGTCTCAC
TCCGGGGTGGGCCATGGCAGTCAGGCCCGATGGAATGGACTGGGAAAGCC
GCCAATCGACATTCATTCAGGGATTCTTAA back to topCoding sequence (CDS) from alignment at CM002458.1:515801..516830+ >rna1935 ID=rna1935|Name=rna1935|organism=Nannochloropsis gaditana|type=CDS|length=2439bp|location=Sequence derived from alignment at CM002458.1:515801..516830+ (Nannochloropsis gaditana)
ATGGGCTTTTTGATGTTGCTGGGGACGTATACGACAATTTTTGAGACGCC
CCTCACAGCTTTCTCCACACTCTTCCCGTTGACCATCGTGTTGGGGATAT
CGATGGCTCAAGAGGCCTTCACGGACGTAAAGCGGCACCGAAGTGATGAC
GAGACAAATAATCGCATGACCAAAGTCACCAGTTGGAATACTGGTGCTGC
TGTGACAAGCGAAAGCGTGAGGTGGCGGGACGTCCACGTCGGGGACCTGC
TCTACGTGAGCAACAAGCAGCCGCTCCCGGCAGACATGGTAATCCTGGCT
ACTAGCGAAAGTGACAATATCTGCTACATCGAGACAAGCTCCATTGACGG
TGAAACAAATTTGAAGCTCCGCCGCGCCATCAACTATTTGCCGACGCATG
ACACCCCACTACTCGATCCTGCAGACGTGATCGCGCGggtagaggaggac
caggcggtCGTCCGTTGTGAGCTGCCCAACATGAAAATTGAAAGCTTTAC
GGGGACCTTCTGCATCTCTcacaaggaggagcatgTATCGTCGGAAGGTG
CACCTCAGAGCGGGGATTTTAATAAAGTCATTCCTATAGACAATGAGAAT
GTCTTGCTGCGGGGGGCCATGCTGCGGAACACGCGCTGGGCAGTTGGTGT
TGTCGTCTACACAGGCAAAGATACGAAGCTGCAGCGCAACTCCCGTCATG
CCCCTTCCAAGTTAAGCAAAATCGATGTGGCGGTCAACAAGGCCATCTAT
ATGTCAGGCCCGATGGAATGGACTGGGAAAGCCGCCAATCGACATTCATT
CAGGGATTCTTAAATGGGCTTTTTGATGTTGCTGGGGACGTATACGACAA
TTTTTGAGACGCCCCTCACAGCTTTCTCCACACTCTTCCCGTTGACCATC
GTGTTGGGGATATCGATGGCTCAAGAGGCCTTCACGGACGTAAAGCGGCA
CCGAAGTGATGACGAGACAAATAATCGCATGACCAAAGTCACCAGTTGGA
ATACTGGTGCTGCTGTGACAAGCGAAAGCGTGAGGTGGCGGGACGTCCAC
GTCGGGGACCTGCTCTACGTGAGCAACAAGCAGCCGCTCCCGGCAGACAT
GGTAATCCTGGCTACTAGCGAAAGTGACAATATCTGCTACATCGAGACAA
GCTCCATTGACGGTGAAACAAATTTGAAGCTCCGCCGCGCCATCAACTAT
TTGCCGACGCATGACACCCCACTACTCGATCCTGCAGACGTGATCGCGCG
ggtagaggaggaccaggcggtCGTCCGTTGTGAGCTGCCCAACATGAAAA
TTGAAAGCTTTACGGGGACCTTCTGCATCTCTcacaaggaggagcatgTA
TCGTCGGAAGGTGCACCTCAGAGCGGGGATTTTAATAAAGTCATTCCTAT
AGACAATGAGAATGTCTTGCTGCGGGGGGCCATGCTGCGGAACACGCGCT
GGGCAGTTGGTGTTGTCGTCTACACAGGCAAAGATACGAAGCTGCAGCGC
AACTCCCGTCATGCCCCTTCCAAGTTAAGCAAAATCGATGTGGCGGTCAA
CAAGGCCATCTATATGTCAGGCCCGATGGAATGGACTGGGAAAGCCGCCA
ATCGACATTCATTCAGGGATTCTTAAATGGGCTTTTTGATGTTGCTGGGG
ACGTATACGACAATTTTTGAGACGCCCCTCACAGCTTTCTCCACACTCTT
CCCGTTGACCATCGTGTTGGGGATATCGATGGCTCAAGAGGCCTTCACGG
ACGTAAAGCGGCACCGAAGTGATGACGAGACAAATAATCGCATGACCAAA
GTCACCAGTTGGAATACTGGTGCTGCTGTGACAAGCGAAAGCGTGAGGTG
GCGGGACGTCCACGTCGGGGACCTGCTCTACGTGAGCAACAAGCAGCCGC
TCCCGGCAGACATGGTAATCCTGGCTACTAGCGAAAGTGACAATATCTGC
TACATCGAGACAAGCTCCATTGACGGTGAAACAAATTTGAAGCTCCGCCG
CGCCATCAACTATTTGCCGACGCATGACACCCCACTACTCGATCCTGCAG
ACGTGATCGCGCGggtagaggaggaccaggcggtCGTCCGTTGTGAGCTG
CCCAACATGAAAATTGAAAGCTTTACGGGGACCTTCTGCATCTCTcacaa
ggaggagcatgTATCGTCGGAAGGTGCACCTCAGAGCGGGGATTTTAATA
AAGTCATTCCTATAGACAATGAGAATGTCTTGCTGCGGGGGGCCATGCTG
CGGAACACGCGCTGGGCAGTTGGTGTTGTCGTCTACACAGGCAAAGATAC
GAAGCTGCAGCGCAACTCCCGTCATGCCCCTTCCAAGTTAAGCAAAATCG
ATGTGGCGGTCAACAAGGCCATCTATATGTCAGGCCCGATGGAATGGACT
GGGAAAGCCGCCAATCGACATTCATTCAGGGATTCTTAA back to top
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