EWM28798.1, cds1930 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28798.1 vs. NCBI_GenBank
Match: gi|585111221|gb|EWM28798.1| (phospholipid-transporting atpase id [Nannochloropsis gaditana]) HSP 1 Score: 563.918 bits (1452), Expect = 0.000e+0 Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0 Query: 1 MGFLMLLGTYTTIFETPLTAFSTLFPLTIVLGISMAQEAFTDVKRHRSDDETNNRMTKVTSWNTGAAVTSESVRWRDVHVGDLLYVSNKQPLPADMVILATSESDNICYIETSSIDGETNLKLRRAINYLPTHDTPLLDPADVIARVEEDQAVVRCELPNMKIESFTGTFCISHKEEHVSSEGAPQSGDFNKVIPIDNENVLLRGAMLRNTRWAVGVVVYTGKDTKLQRNSRHAPSKLSKIDVAVNKAIYMSGPMEWTGKAANRHSFRDS 270 MGFLMLLGTYTTIFETPLTAFSTLFPLTIVLGISMAQEAFTDVKRHRSDDETNNRMTKVTSWNTGAAVTSESVRWRDVHVGDLLYVSNKQPLPADMVILATSESDNICYIETSSIDGETNLKLRRAINYLPTHDTPLLDPADVIARVEEDQAVVRCELPNMKIESFTGTFCISHKEEHVSSEGAPQSGDFNKVIPIDNENVLLRGAMLRNTRWAVGVVVYTGKDTKLQRNSRHAPSKLSKIDVAVNKAIYMSGPMEWTGKAANRHSFRDS Sbjct: 1 MGFLMLLGTYTTIFETPLTAFSTLFPLTIVLGISMAQEAFTDVKRHRSDDETNNRMTKVTSWNTGAAVTSESVRWRDVHVGDLLYVSNKQPLPADMVILATSESDNICYIETSSIDGETNLKLRRAINYLPTHDTPLLDPADVIARVEEDQAVVRCELPNMKIESFTGTFCISHKEEHVSSEGAPQSGDFNKVIPIDNENVLLRGAMLRNTRWAVGVVVYTGKDTKLQRNSRHAPSKLSKIDVAVNKAIYMSGPMEWTGKAANRHSFRDS 270
BLAST of EWM28798.1 vs. NCBI_GenBank
Match: gi|585103188|gb|EWM22623.1| (phospholipid-transporting atpase [Nannochloropsis gaditana]) HSP 1 Score: 206.068 bits (523), Expect = 8.165e-57 Identity = 108/250 (43.20%), Postives = 161/250 (64.40%), Query Frame = 0 Query: 4 LMLLGTYTTIFETPLTAFSTLFPLTIVLGISMAQEAFTDVKRHRSDDETNNRMTKVTSWNTGAAVTSESVRWRDVHVGDLLYVSNKQPLPADMVILATSESDNICYIETSSIDGETNLKLRRAINYLPTHDTPLL--DPADVIARVEEDQAVVRCELPNMKIESFTGTFCISHKEEHVSSEGAPQSGDFNKVIPIDNENVLLRGAMLRNTRWAVGVVVYTGKDTKLQRNSRHAPSKLSKIDVAVNKAIYM 251 L++LGTYT +F+ PLT ++TLFPL +VL ++M +E F DVKRH +D ETN ++ S +S++ +++ VG ++ V +KQ +PADM++L +SE++ CY+ETS+IDGETNLK+R+A + DPAD+ Q V CELPN I SF+G + H++E N+ P+D N+LLRG+ +RNT+W +G+VVYTG+DTK+ +NSR APSKLS ++ VN +Y+ Sbjct: 76 LLMLGTYTPLFDAPLTPYTTLFPLLVVLAVTMGKEGFEDVKRHIADRETNTAPVEMLSLEKPGEF--DSMQRQEIRVGRVVRVLDKQMVPADMILLTSSEAEGSCYVETSNIDGETNLKIRQAAKTAADGVGSMWQDDPADLHGW----QGTVECELPNSHIHSFSGV--LRHEKEG------------NRETPVDESNLLLRGSSVRNTKWVLGLVVYTGRDTKIVQNSREAPSKLSTVEHTVNNMLYL 305
BLAST of EWM28798.1 vs. NCBI_GenBank
Match: gi|585112151|gb|EWM29580.1| (putative phospholipid-transporting atpase ia isoform 1 [Nannochloropsis gaditana]) HSP 1 Score: 202.216 bits (513), Expect = 1.974e-55 Identity = 107/256 (41.80%), Postives = 157/256 (61.33%), Query Frame = 0 Query: 4 LMLLGTYTTIFETPLTAFSTLFPLTIVLGISMAQEAFTDVKRHRSDDETNNRMTKVTSWN----TGAAVTS----ESVRWRDVHVGDLLYVSNKQPLPADMVILATSESDNICYIETSSIDGETNLKLRRAINYLPTHDTPLLDPADVIARVEEDQAVVRCELPNMKIESFTGTFCISHKEEHVSSEGAPQSGDFNKVIPIDNENVLLRGAMLRNTRWAVGVVVYTGKDTKLQRNSRHAPSKLSKIDVAVNKAIYM 251 LML+GTY+ +E+PLT ++TL PL +VL I+M +EAF D+KRH +D +TNNR+ +V GA E VRWRD+ VG ++ V +++ +PAD+V+L +S++ CY+ETS+IDGETNLK++ A P A+ ++ A + CE PN +I S+TGT + K P + + + N+LLRG+ LRNT+WA+G+ VYTG TK+ NSR APSKLS I+V N+ +Y+ Sbjct: 150 LMLIGTYSDFYESPLTPYTTLIPLCVVLTITMGKEAFEDLKRHTADQKTNNRIARVVRLERPGCRGAGGDENGGIEEVRWRDIGVGRVVQVRDREEIPADLVLLTSSDAGGNCYVETSNIDGETNLKIKEAARTAEDGGGPAFWKAE---ELQAWGAAMVCEAPNARIHSYTGTLTLLSK--------GPGE---RRRVAVSQANLLLRGSRLRNTQWALGLAVYTGAQTKIVMNSRTAPSKLSAIEVTTNRLLYL 391
BLAST of EWM28798.1 vs. NCBI_GenBank
Match: gi|299471195|emb|CBN79051.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 192.586 bits (488), Expect = 5.420e-52 Identity = 104/259 (40.15%), Postives = 157/259 (60.62%), Query Frame = 0 Query: 4 LMLLGTYTTIFETPLTAFSTLFPLTIVLGISMAQEAFTDVKRHRSDDETNNRMTKVTSWNTGAAVTSESVRWRDVHVGDLLYVSNKQPLPADMVILATSESDNICYIETSSIDGETNLKLRRAINYLPTHDTPLLDPADVIARVEEDQAV---VRCELPNMKIESFTGTFCISHKEEHVSSEGAPQSGDF--------NKVIPIDNENVLLRGAMLRNTRWAVGVVVYTGKDTKLQRNSRHAPSKLSKIDVAVNKAIYM 251 LM+LG YT +FE+PL FST+ PL +VL ++M ++ D+KRHRSD+ NN T+ T+ + V W+DV VG ++ +++K+ +PAD+V+L++SE + YIET++IDGETNLK+R + PT P P + + EE V + E PN +I FTGT + G PQ ++ +P+D N+LLRGA LRNT+WA+GVV YTG+++K+ +N+R PSK S +D NK +++ Sbjct: 70 LMMLGWYTDLFESPLAPFSTIIPLILVLSVTMVKDGAEDLKRHRSDNRVNN--TEATAMDIHTRGGFVPVAWKDVKVGMIVKIADKEEIPADVVLLSSSEPGGVAYIETANIDGETNLKIRTSA---PTR--PGQPPGPLWSSAEELHGVRMELEYEAPNARIHFFTGTLTLH------GGAGGPQDDSGEGGGGGTGSRDVPVDQSNLLLRGARLRNTKWAIGVVAYTGRESKIAQNARSVPSKQSNLDKVTNKIMFV 315
BLAST of EWM28798.1 vs. NCBI_GenBank
Match: gi|923120266|ref|XP_013753605.1| (hypothetical protein AMSG_10444 [Thecamonas trahens ATCC 50062] >gi|906561206|gb|KNC54449.1| hypothetical protein AMSG_10444 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 179.874 bits (455), Expect = 1.128e-50 Identity = 95/236 (40.25%), Postives = 137/236 (58.05%), Query Frame = 0 Query: 16 TPLTAFSTLFPLTIVLGISMAQEAFTDVKRHRSDDETNNRMTKVTSWNTGAAVTSESVRWRDVHVGDLLYVSNKQPLPADMVILATSESDNICYIETSSIDGETNLKLRRAINYLPTHDTPLLDPADVIARVEEDQAVVRCELPNMKIESFTGTFCISHKEEHVSSEGAPQSGDFNKVIPIDNENVLLRGAMLRNTRWAVGVVVYTGKDTKLQRNSRHAPSKLSKIDVAVNKAIYM 251 +PL F+++FPL +VL I+ A+E D +R + D ETN+R T+V T E V W V VGD++YV++ + P D+++L+TS CYIET+++DGETNLK+R+A + DTP + + + E + CE PN ++ +FTGT + E + G + +DN V LRG LRNT W GV VYTG DTKL RNS PSK S+ID +NK +++ Sbjct: 120 SPLNPFASIFPLALVLVITGAKELVEDRRRAKQDKETNSRTTRVLR---PGCTTVEEVSWESVRVGDIVYVTSGEAFPCDVILLSTSGEQGTCYIETANLDGETNLKIRQAPSQTLDFDTP-----EALTKFE---GTIECEGPNNRLYTFTGTLYLCKPSEREGTTG----------VALDNRKVCLRGCNLRNTEWVYGVAVYTGHDTKLMRNSMDPPSKRSQIDRIMNKDVFI 334
BLAST of EWM28798.1 vs. NCBI_GenBank
Match: gi|1183411886|gb|ORY36357.1| (phospholipid-translocating P-type ATPase [Rhizoclosmatium globosum]) HSP 1 Score: 181.03 bits (458), Expect = 4.268e-48 Identity = 107/250 (42.80%), Postives = 146/250 (58.40%), Query Frame = 0 Query: 3 FLMLLGTYTTIFE-TPLTAFSTLFPLTIVLGISMAQEAFTDVKRHRSDDETNNRMTKVTSWNTGAAVTSESV--RWRDVHVGDLLYVSNKQPLPADMVILATSESDNICYIETSSIDGETNLKLRRAINYLPTHDTPLLDPADVIARVEEDQAVVRCELPNMKIESFTGTFCISHKEEHVSSEGAPQSGDFNKVIPIDNENVLLRGAMLRNTRWAVGVVVYTGKDTKLQRNSRHAPSKLSKIDVAVNKAI 249 F + +G I + +P TL PL IVL S +E D+KR + D E NNR KV V SE + +W+DV VGD++ V N Q PAD+V+L++SE D +CYIETS++DGETNLK+R+ + T LL P + +A +E V++ ELPN + +F GT +SHKE +P+D +LLRGAMLRNTRW GVVV+TG +TKL +NS PSK +K++ VN I Sbjct: 59 FFLFIGCIQQIGDLSPTNKAGTLLPLGIVLFASGVKETLEDLKRTKQDTEVNNRDIKVL-------VGSEFIVKKWKDVVVGDIVRVENGQFFPADLVLLSSSEPDALCYIETSNLDGETNLKIRQGLQ----ETTDLLSP-EAVAGLE---GVIKSELPNNSLYTFEGTLRLSHKE-----------------VPLDPAQLLLRGAMLRNTRWIYGVVVFTGHETKLMKNSTATPSKSTKVERMVNTQI 276
BLAST of EWM28798.1 vs. NCBI_GenBank
Match: gi|223993145|ref|XP_002286256.1| (hypothetical protein THAPSDRAFT_26702 [Thalassiosira pseudonana CCMP1335] >gi|220977571|gb|EED95897.1| hypothetical protein THAPSDRAFT_26702 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 179.874 bits (455), Expect = 1.021e-47 Identity = 101/251 (40.24%), Postives = 146/251 (58.17%), Query Frame = 0 Query: 1 MGFLMLLGTYTTIFETPLTAFSTLFPLTIVLGISMAQEAFTDVKRHRSDDETNNRMTKVTSWNTGAAVTSESVRWRDVHVGDLLYVSNKQPLPADMVILATSESDNICYIETSSIDGETNLKLRRAINYLPTHDTPLLDPADVIARVEEDQAVVRCELPNMKIESFTGTFCISHKEEHVSSEGAPQSGDFNKVIPIDNENVLLRGAMLRNTRWAVGVVVYTGKDTKLQRNSRHAPSKLSKIDVAVNKAIYM 251 +G LM +G YT +FE+ ++ ++TL PL IV+ +S+AQEA+TD +RHRSD TN V + ESV ++H GDL+ V N++ +P D+++LA+S YIETSSIDGETNLKLR + +LP+ + P A + E PN + +++G + SE AP ++ EN+LLRGAMLRNT W VGV +TG DTKL NS PSK S++D+ +N+ + + Sbjct: 18 IGILMFIGYYTPLFESAISPWTTLGPLAIVISVSLAQEAYTDAQRHRSDKATNYHPCVVLK----LPIAFESVFRMNIHAGDLVVVRNREMIPVDLILLASSNEGGSAYIETSSIDGETNLKLRNS-PHLPS-----VRPGVTGGDNSPFIATLTSEPPNTHVNNYSGKLTLPPMTPGEPSENAP----------LNAENILLRGAMLRNTEWVVGVACFTGADTKLVMNSVATPSKFSQLDMLINRTVVL 248
BLAST of EWM28798.1 vs. NCBI_GenBank
Match: gi|676394453|ref|XP_009040504.1| (hypothetical protein AURANDRAFT_55026 [Aureococcus anophagefferens] >gi|323448874|gb|EGB04767.1| hypothetical protein AURANDRAFT_55026 [Aureococcus anophagefferens]) HSP 1 Score: 176.022 bits (445), Expect = 2.742e-46 Identity = 103/260 (39.62%), Postives = 154/260 (59.23%), Query Frame = 0 Query: 1 MGFLMLLGTYTTIFETPLTAFSTLFPLTIVLGISMAQEAFTDVKRHRSDDETNNRMTKVTSWN-TGAAVTSESVRWRDVHVGDLLYVSNKQPLPADMVILATSESDNICYIETSSIDGETNLKLRRAINYLPTHDT---PLLDPADVIARVEEDQAVVRCELPNMKIESFTGTFCISHKEEHVSSEGAPQSGDFNKVIPIDNENVLLRGAMLRNTRWAVGVVVYTGKDTKLQRNSRHAPSKLSKIDVAVNKAI-YMSGPM 255 + LM++GTYT +F +PLTA+ST+ PL+++L I+M +E D+KRH+SD+ NN ++ S + T E+V W+ + G ++ V +++ +PAD+V+L +SE CY+ETS+IDGETNLK++R P D+ PL D + + + E P K+ SF GT +H E I +D LLRG+ LRNT+ A+GVV YTGKDT+L RNSR PSKLS+++ VN + ++ G M Sbjct: 78 ISLLMIIGTYTDLFYSPLTAWSTIGPLSLILAITMTKEGIEDLKRHKSDEHVNNSEARILSNSPETPPGTVETVAWKAIAPGQIVLVKDREEIPADLVLLWSSEGAQ-CYVETSNIDGETNLKIKR-----PATDSANAPLFPHPD---KSKGVGMTLEFEAPCGKVHSFEGTL------KHAGGE-----------IALDASQFLLRGSTLRNTKLAIGVVAYTGKDTRLVRNSRDVPSKLSELERVVNNMVLFILGAM 311
BLAST of EWM28798.1 vs. NCBI_GenBank
Match: gi|676385069|ref|XP_009035813.1| (hypothetical protein AURANDRAFT_53224 [Aureococcus anophagefferens] >gi|323453906|gb|EGB09777.1| hypothetical protein AURANDRAFT_53224 [Aureococcus anophagefferens]) HSP 1 Score: 175.252 bits (443), Expect = 5.288e-46 Identity = 102/260 (39.23%), Postives = 154/260 (59.23%), Query Frame = 0 Query: 1 MGFLMLLGTYTTIFETPLTAFSTLFPLTIVLGISMAQEAFTDVKRHRSDDETNNRMTKVTSWNTGAAV-TSESVRWRDVHVGDLLYVSNKQPLPADMVILATSESDNICYIETSSIDGETNLKLRRAINYLPTHDTPLLDPADVIARVEEDQAV---VRCELPNMKIESFTGTFCISHKEEHVSSEGAPQSGDFNKVIPIDNENVLLRGAMLRNTRWAVGVVVYTGKDTKLQRNSRHAPSKLSKIDVAVNKAI-YMSGPM 255 +G LM++GTYT +F +PL +ST+ PL+++L I+M +E D+KRH+SD+ NN ++ S + T E+V W+ + G ++ V +++ +PAD+V+L +SE CY+ETS+IDGETNLK++R P D+ A + +E + V + E P K+ SF GT +H E I +D LLRG+ LRNT+ AVGVV YTGKDT+L RNSR PSKL++++ VN + ++ G M Sbjct: 78 IGLLMIIGTYTDLFYSPLLPWSTITPLSLILAITMTKEGIEDLKRHKSDEHVNNSEARILSNSPETPPGTVETVAWKAIAPGQIVLVKDREEIPADLVLLWSSEGAQ-CYVETSNIDGETNLKIKR-----PATDSA---NAPLFPHPDESKGVGMTLEFEAPCAKVHSFEGTL------KHAGGE-----------IALDASQFLLRGSTLRNTKLAVGVVAYTGKDTRLVRNSRDVPSKLAELERVVNNMVLFLLGAM 311
BLAST of EWM28798.1 vs. NCBI_GenBank
Match: gi|1183358695|gb|ORX86159.1| (phospholipid-translocating P-type ATPase [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 174.481 bits (441), Expect = 9.955e-46 Identity = 98/234 (41.88%), Postives = 141/234 (60.26%), Query Frame = 0 Query: 16 TPLTAFSTLFPLTIVLGISMAQEAFTDVKRHRSDDETNNRMTKVTSWNTGAAVTSESVRWRDVHVGDLLYVSNKQPLPADMVILATSESDNICYIETSSIDGETNLKLRRAINYLPTHDTPLLDPADVIARVEEDQAVVRCELPNMKIESFTGTFCISHKEEHVSSEGAPQSGDFNKVIPIDNENVLLRGAMLRNTRWAVGVVVYTGKDTKLQRNSRHAPSKLSKIDVAVNKAI 249 +P + FSTL PL +VL + +E F D KRH+SD E NNR KV G+A E WRDV VGD++ VS+K+ PAD+++L++SE + +CYIETS++DGETNLK+++ + + +H L P D V E Q ++ ELPN + ++ GT I++ G K+IP+D +LLRGA LRNT W GVVV+TG ++KL RN+ P K + ++ N I Sbjct: 73 SPTSRFSTLVPLIVVLIATSFKEIFEDYKRHQSDAEANNRPCKVL---VGSAF--EEKPWRDVVVGDIVRVSDKEFFPADLILLSSSEPEALCYIETSNLDGETNLKIKQGLQ-VTSH---LTTPND----VSELQGYIKSELPNNSLYTYDGTLVITN-------------GMAEKIIPVDPNQILLRGAQLRNTNWVYGVVVFTGHESKLMRNASATPIKRTNVEKMTNHQI 280 The following BLAST results are available for this feature:
BLAST of EWM28798.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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