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Properties
| Property Name | Value |
|---|
| Product | Bromodomain transcription factor |
| Orig transcript id | gnl|cribi|Naga_100002g86.4937.mrna |
| Orig protein id | gnl|cribi|Naga_100002g86.4937 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:507001..507855 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1933 ID=rna1933|Name=rna1933|organism=Nannochloropsis gaditana|type=mRNA|length=6743bp
ACAAGTTATACAAATACAGAGAGGCGACTCAAGTCCGTCTCAGGCTTGCA
GAATCTCAGGTTGTGCACTCGAATCCCTTGTCTTGAGCAGGGCCGTGCTC
CGTGAAGCGCCGTACCTTGAGGGGGTGGAGCCTCTTAGCATAGCACAGAC
AACATGGAGGATCTCACGGACGCAGGGACCACAGCCAGCATAGAAGCTAT
CGAGAACGCGATTTCACAGGCGTCCGCGGTGTCGGCCGCGCCTATCGACA
TGGATGTGGCACAGAATGACGTAGGGTTCCAGTCGGAGCCTGAGAAAATA
TCGGGTGCCTTGTTGCCCTCTTCACAGTCGCAGTCTCCTTTCTTGCCGGC
AAACGATGGGCAAGCATATGTCAACCGCGCGCCAGAGATAAAGACGGAGG
CTGAAATATCCATGGTAGACCCGACGGGGTCGCAAGCCCAGCCTCTACCT
GCTTCGACTGCCTCGTCCGCCCCGGAGAAAAAGAAATACGCGTCCCGTCC
CCCACGCCTGGGAGACTCCTTTCAGGCCATCGTTCCTTCCCTAGGCTCTG
AGGTAAATCACGAGCACCGGACGCGGACCTCGACGGGTCTCATCTCGAAA
AAGAGCGGACGGGAGCCTGTCCCGGAGAATGACGCCGACTCTCGTGACTT
GCGACCGCATCAATTTTCCCTACGTGATGGCTTGATCTGGATGCCCTCTG
CGCTCCCGGAGGAAGAGGTTGACAATTATTTGATAATGACGCGTGGCCTG
CTCGAGCAGACCTCTCACTCTCAAGACCGCCAGGCCCCGCCCTGGCGACG
CCGCGGAGTCTCAAGCAGTGGCGTGCCCCTCGTCTCGGCGAAGGAGGCTG
CGACGACTGCAGGAACAGGAGAGCAAAGTCAGGGCGCGGGGGGTCTTATT
CCACTGGAGGCTGACGAGCGGGCTCTGTTCTACTTGTATCAGCGAGACTA
CGGCGTGGACAGGGCATCGCTCAGTCTGATGTCAGAGCTTGGAATGGGAA
AGGAATACAAGTTCCTTCATGCGCTGGACACACTTTATCAATCGGGCGCC
TCCGCTGCGGCCCTGGATCGTCGTGACCGCACCACTTTGGTGGGATCCTT
CTCCTCTGGGGGCGTCCCGTCGATAGGCTACTCGCGAGGGGCTCGGCCAG
CACAGTACCCGTACGCATACTACTATCCCGACAGAGCGCCCTCGGCGGCC
AGGGGATCGAGCACTGAAGAAGATGGCGGCCACGGGGGAAAGCCAGAGCA
ACAAGAGTGCTTAGGCGAGGATGAAGACGGGCCGGTTGAGAGCCGCGAAA
AAAAGAAGCGGTCTGCGGACAAAACAGAAACTCGTAAGCAATACGCGGTC
CTGGTGGAACGTGCATCTTCGCTTTGGCGTGCTGTTGAAGCGTGCAGGAA
AAAAGGTAGCAGCGGCAGCAATCTTAATCTGAATGGCGATGGAGGAAAGG
TTACCTCAGCCTGTGCATCGACTTCCGTGTCAGATCGGCCGCGTCAATCA
GACATTTTGACCATCGTCCATGAAATCGCGACTTTGCCAAATGTGGATCT
TCCTCTCGGAGACTCGCTTTCCAAGGAGTTGGACAAGTCATTTGGAGGGC
TTAAAGAAGTATTGGCGACCTCGAGGAAATTTGTGGCCAAGGTACACGAT
GCATTGAATACCACCGCTGCCCCAAGTAGCTCTATAGATGAGCTGAATGC
CCTTCTTGAGGAGCTCCGGCAGCAGCCAATTTTGCTAAGGGAAGAGGTCC
AACTCGCTCAGATCATTGCGGACGCAAAGCAGTGGGAGGCTAAAGCAAAG
AAATCATTACAAGATTTGCGTAAACTTTCTTTGCCAGAGGCAGAGAATCT
CATTACAGCGGCAGATGGTTTACCTCTGCGTTTAGATACTAGAAAAATAC
TAGAGGCGAAAGTGAAAGATTGCAGGGCCTTGGCAGAGGAGATTCTCTCC
CTCGTCCCCGCGAGGATGGGGCGAAGTATGGCTGAGTGTCAGACGCTGGC
AGCTTTGGGAGCTGTATTGGAGCGGGCTAAAGAGGTACAGCTTCAGTTTC
CAGAGCTAGATATGCTAAAGGCTGTGATCACGCGCACGGAGGGCTGGATC
AGCGAAGCAAAAGTGGCAGTTTCAGAGACACCAGACCTGCGAAAATTGCA
GAGTCTTCTTGAGGAAGCCAACACCATTCCTGTAAATTTAAGCGACACAT
GCGAGGAAATTCGAGGGAAGGTGGAACAGGCGCATCACTGGGTTGAGAAG
GTGCGCAAGGCTCTTCCGCGAAAGAACAAAACTCGCAGCAACGCCGGTGA
TGCCGGAAAGGTTGACTACTCTGCAGCGAGAACCCTTTTGAGCGAAGGCG
CGGGTATTCGGGTTGACGTCAAGGAGCTCGATGACATCGCCGGAGTTTTA
GACACGGCCGAGACCTGGCTTCAACGCGTCCGGGAGGCTCTTGAGGAATC
GACTGACGAGGCTGGCCTGCAGTCCTTGCAAGCTCTCCTGTGCGAGGCGG
ACGATATTCCCGTTGAAATGGATGAACACAAGATATTGGCAGCCGAGATT
GAAGCCCGACGATGGGGTTTGCGCGTACAGCCGCGTCTGGACGGGTCACA
GGTGACCGTTAAGACCCTTGAAAAGCTTGTGGCAGAGGCAGCAGGGTTGC
GAGCGCGCCTACCAATAGCGGCGCAAGACAAGAAAGCTTGGCGGCTACCA
CAGGAGATCGAGGCACGGCGTCGACTTCAGGGGGCTCAGTCCTGGTTGAA
GATTTTTCGCACTTGCGTGAACTCAAATGGACTCGGCCTTCGCAAGGGTG
TGACAGTGCGTAAAGTGTTGCATTTGCTCCAGCTAGCTGGAGATGTCCCG
GTCGACCTATCTGAGCAGATGCGGCCCCTGGAAGAGGCTCTTGCTAAAGC
GAAGCGATGGCTTGAATCCTCGTCAGAAATTTTGAAGTCGTGCGGCATCC
GGTCGCGCACCAAATTTTGTCTAGCAGAAGAAAAAGGTGATGGGGAGGCT
GATACGTCGGTTGTGGACGCAGCCTCGGGAGAAAGCGGGCAAAAAAGCGG
ACAGCTGTGTGATAATACTGCCGACGGAAGAGACAACGAGGAGCTAGAGG
ACACAGGGAAAAAATGGGATGTCGATCCCAATCTGGATGAGGATGCTTCA
AGCTCAGCTGGAGAAGAGGGTGTCTGCATATTTGAAGGCGCAAAAGTGCA
CCAGGAGGCCCTCACAGAATGTGTGGGCGAAGCGTCGGAAATAGGCGTGG
AGCTGCCCGAAGCAGAAAGCCTGAAAGCCTTACTACAACGTGTACAGCAT
TGGTTGGATCAGCTGGGCGTCGTTTGTCCGAAGCGGACGAGCAAGCGTCG
CGGGATGCGTCTGAAGGTCTCTGTGCAGGAGGTACGCGATCTGATAGATG
AGGGCAAGGCGTTTCCGGTCGATGTGTCGGAAGAGGTGGAAGAGATAACT
GAGCGACTGGAGACGACTCTCAAATGGCAAGATGAAGTTCAAGCCGAATT
GTTGGACGTTGCACAGGAGGGATTGCGAGAGAGTAAGGCGTACAAGCTGA
AAGATGTGAAAGATGGGAGGAATGGCGACAGAAGTGACGTTCCTGAGGTC
GATGAAGATGATGTCTTCAACGAGTCCCACGAGAACCGTGTAAAGCGCCT
GGAAACTTTGTTGGAGCAGACGAGTGACGTGGGTATCGATTCGTTAGAAG
ACGACATGATCTCCCGGCATCTGAAAGCACATCAATGGGCTTCGAACGCC
ATCGATTTGCTGGAGTTCGTGGATCCGAAAGCCAACGTCACGGATATCTG
TTTAGCTGAGATTGCCGACGTTATGAATGATGGAATGGAATTGTTGTACG
CAGAGGTAGCAGACGACGACGCTGCTTGCTGTGCCTCGGATTGTCAGCAG
TCATCAGTTGCATCGAAAGGGTCTCTAAGTGCAGTTGATGGGGATGGAGC
CTTGAATACTGCTTCCCCTTCCTTGCTCAGCTATTCTTCTAAGGCAGGCA
TGGCGTGCGATGAAAGGTGCACATCGGCAGAAGCAGGCGACATATCTGCT
CCTGACTCGGATCTCCTTTGTGCGGCGGATGTAAATAGTACAAAAGAAGG
TGATCAGAAGGGCAGTGTCGCGGCGAAAACAAGTACCAAGGAGTTTGAAG
TGTACGTGACGGAGCAAGGGGAAGTGAAGAAGCGGCGGTTAAAGCAAAAG
ATGAAGAAGGTTTTGATACAAAGCCACGGAAAATGTGACGAGGTGCTAAT
GGAGATGATGGTTTTCTGGTGGGATAAGACCAAGATTTTGCGCCAAATCT
GGGAGACAAGTAGGGAATGGTCCAAGCGTGCTACTCGTCTTTTAAGCTCG
GGCGGTGAGAAGGTGCGTCTAGACGTTATGGAGGAGCTTCTTGCGGAGAC
ACACTCATGGGATTTTGAGATGGAGCTGGTCAACCGTGTGCGAGCCGAGG
TAGAACGTGGAAAGAACATATTGAGTCGAGCCACTGCTGCACTTGAGGGT
GGCGAAACTGCGAAACTAGAGCTTTCGGCTTTGAAATCTCTCATAACAGA
AGGGGATAAATGCAAGGTTTATATAGAGGAGATAAAGGCTTTGCGAAAGC
ACCTTGCGAGTGGGCAACGATGGATTGCGCGTTGCCAAAAAACTAGACCA
GAAGAGCTAGATGAAATGATGGTTCTTGCCGAAGAAGCTAAAGAAATTCG
AGTGAATTTAGGTGAGGAATATGAAAGGGTGCTTCACAGGATTATTCGCT
GCTGTTTTTGTCGGCAAATGGTCGATGGCCCCCTAATACGGTGCACAGAA
TGCGGCGAGAAATACCATCAACGATGTTTCGATATTCGCGAAGCGGATGC
AGTCGACTGGGAGCGACGTGGATGGTGCTGCCCGCGATGTTTAGTTCGTT
GGCACATGCGGGATGCGCTAGCCAAGACAATGGTCATTGTTTCGAAATGG
ATCGCGGTCCCGAACGCCACCCCTTTGGGCCCCATTTTACCACACGGTCA
GCCCATGATGCAGACAGCACTTTATGGTATGGGAGGAGGCGGTGTTGGCG
GCGTGCTAGATGAGCATTATGCGCGGGCGGTCGAGTTGACGACTGGAAAG
GTCAAAGCATGGATGAAGCGGCTTTTGCACGCTGTCATGATGTGCGCAGA
TCGGAACGCCGAGGAAGTGAGGACCCTGGGCACCTCGAAACTAGTGAAGG
GTAGCGTGTTGGTGGAGGTTATCCGCCTTGCTAAAGGAGACTTGGACGTT
GATAAATGTGCGGACGTCAAGGAGGTTATTTGGAACTTGAGTGTCGTCTT
CTGGGGGGCGCGCCTCATCTGCCAACTGCGGCGTCGACCCAGTCTGGTTC
CTCTCCAGGCGCTCACGGCGGAGATGCAATCCGTCGGCATACACAATGAG
CCCCTGCAGGTCATGCTGAACAACCTCATTAGACGCGCCCTGGAGTGGAT
TTATAAGGCCAAACCCATCTTGCAACAGGGCTGGATAAGCGGCGATCAAG
CAGTTATCAACGTTGCACGGCTTCGGGAGTTGATTCAGGAGAAGCGCAAT
ATTCCTGTGCGCCTTCTCCTCGAGCGGCGGTTAGAAGCCATGCTTGCAGA
GGAAGTACCGGAGAAGCGGTATTGCCACTGTCGCGGATTTTATGACGGCT
TGTTCATGGTGCAGTGCATTTCCTGCAACGAGTGGTTCCACGGGAGATGT
GTTCAGATCCGAGCGGAGGATTTGGACCGGCGGACCGAGTACCAGTGCGT
CAACTGCTCGCAGCTCAAGAGCATCCCTTATCCTTATCCGCCCTACCGTG
CCCCCGATCCGGAATCGCTCTTAGCTGAGGTGGATGAGGAGGAGGAAGAA
GCAATTTCCGATATAATCTTAAGCGGGATTGGAGGCGGTGGTGGAGGAGG
GGCCGAAGGGATGAATCTACTTGATCAAGATGAAGAGATATTCATGGCCG
ACAAGGGCAGCCTCGAGGGCATCTTCCCGTGTAAGAAAAAATTATCCTCG
CTAGACGAAGCCTCCAACCATGTAGATATGTATCTTTTGCCATTGGCCCC
GTCAATGAAGCGAAAAAAGCTCGGGATGGGGGGCGCTGCAGAAAGCCGTC
GCCATTTATCTGGGGGGGCGGAGGGCGTCTCCAAGAAGAAGCAGAGGCCT
AGTCCTAGCAGTCATGGGTCAAAGGCTGGAACAGGAGGTGGCAATGGTGC
TTGCGCCAGCCACACTAGCAAGGGCAACAAACTGAAAGCAAAGCGCAAGG
GGCCATCGATTGACCGCAATGGGAGGACTCTCACAGGTGTCGATTTGGAT
AGCCTTGGGACGATGGGAGACCTGGATAAAAATCCAGCACCTTCTAGTGT
TGGTGGGGCCAGTGCAGTCTCGGTGTCCTCCCAAGAGTCCAGCAAAGCAG
TCACATCAAGTAAGCGCGGTCGTGTACGCAAACCTCACAGCAGGCTTCAA
GGAGACGATTTCGTCTTCAGCGGCATCGCCGTTTCCGGATCGGGTGGTAG
TGGCGGGCTAAAGAAAACTGGCTGACGACTGCTATGTTGAATACATGCAC
ATAAGCCGTTGAAAAAGCAGAGCGCTATGGTAGGATGAGGAAGTTTGGTG
CTAAAACCGCTCTTCGATCTTCTCGGCGAGGGAAGTGAGGACGGTTGGTG
GACTATAAGCGAATGAAGAATATCACATAGGACACCCGACTAAAGAAAAT
TAGGAAAGTTATCAAAGCAGCAAGACAAGTTGGAACGGTTTGC back to topprotein sequence of rna1933 >rna1933-protein ID=rna1933-protein|Name=rna1933|organism=Nannochloropsis gaditana|type=polypeptide|length=284bp
MCATPGTSAPSRFHPCQATVMAPKALSHSRPHAPAQPLTRYHHCGEADTF
ALAVTRQAVAQAALAVGCKETYPSVLDALTDLVRDYIVAVGVEAQSKAEA
GGRTRATLLDVLAALEVPQQENARDRYEMDWRALRGFAFQGDESQLDRPE
AFQWYQPFHTHIPPFPVHSRIYVENCRRSRKRALPLDRSSDVDSPGRETD
EREEVSGGRSAYPRPAFVPSFLPPFPPEHTFRKTAVKASTKLDDPVAIQR
HRIATKQLVLKTIARQNIASVNPKGEKEGNCAKA back to topmRNA from alignment at CM002458.1:507001..507855+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1933 ID=rna1933|Name=rna1933|organism=Nannochloropsis gaditana|type=mRNA|length=855bp|location=Sequence derived from alignment at CM002458.1:507001..507855+ (Nannochloropsis gaditana)
ATGTGTGCTACGCCAGGTACAAGCGCTCCCTCGAGATTCCACCCGTGTCA
GGCGACTGTCATGGCCCCGAAAGCACTTTCACACTCAAGGCCCCACGCAC
CAGCACAACCTCTAACCCGGTACCACCATTGTGGAGAGGCAGATACATTT
GCTTTAGCAGTAACCCGACAAGCCGTTGCACAAGCAGCGTTGGCGGTGGG
CTGCAAAGAGACTTATCCATCTGTCCTGGATGCCCTCACCGATCTCGTCC
GCGACTACATTGTAGCAGTAGGCGTAGAAGCGCAATCCAAAGCTGAGGCC
GGTGGGAGAACGCGTGCTACATTGCTTGATGTGTTGGCGGCGCTTGAGGT
ACCACAGCAAGAGAATGCCCGGGATCGCTACGAAATGGATTGGCGGGCTC
TGCGGGGTTTCGCTTTCCAGGGGGACGAGAGCCAGCTAGACCGCCCTGAA
GCTTTCCAGTGGTATCAACCATTCCACACGCAcatcccaccctttcctgt
cCACAGCCGCATCTATGTAGAAAATTGTCGGAGAAGTCGTAAGAGAGCGC
TGCCGTTGGATCGAAGCTCGGACGTCGACAGCCCTGGTCGTGAAACTgat
gaaagggaagaagttTCTGGCGGGCGAAGCGCTTACCCGCGCCCAGCCTT
TGTACCCTCATTTCTGCCTCCATTTCCGCCAGAGCACACATTTCGTAAGA
CGGCGGTCAAGGCATCGACAAAATTAGATGACCCAGTCGCTATTCAACGG
CATCGCATCGCTACAAAGCAACTCGTTCTCAAAACTATCGCGCGGCAAAA
TATCGCCTCTGTGAATCCGAAAggtgagaaagagggaaactGTGCGAAAG
CGTAA back to topCoding sequence (CDS) from alignment at CM002458.1:507001..507855+ >rna1933 ID=rna1933|Name=rna1933|organism=Nannochloropsis gaditana|type=CDS|length=855bp|location=Sequence derived from alignment at CM002458.1:507001..507855+ (Nannochloropsis gaditana)
ATGTGTGCTACGCCAGGTACAAGCGCTCCCTCGAGATTCCACCCGTGTCA
GGCGACTGTCATGGCCCCGAAAGCACTTTCACACTCAAGGCCCCACGCAC
CAGCACAACCTCTAACCCGGTACCACCATTGTGGAGAGGCAGATACATTT
GCTTTAGCAGTAACCCGACAAGCCGTTGCACAAGCAGCGTTGGCGGTGGG
CTGCAAAGAGACTTATCCATCTGTCCTGGATGCCCTCACCGATCTCGTCC
GCGACTACATTGTAGCAGTAGGCGTAGAAGCGCAATCCAAAGCTGAGGCC
GGTGGGAGAACGCGTGCTACATTGCTTGATGTGTTGGCGGCGCTTGAGGT
ACCACAGCAAGAGAATGCCCGGGATCGCTACGAAATGGATTGGCGGGCTC
TGCGGGGTTTCGCTTTCCAGGGGGACGAGAGCCAGCTAGACCGCCCTGAA
GCTTTCCAGTGGTATCAACCATTCCACACGCAcatcccaccctttcctgt
cCACAGCCGCATCTATGTAGAAAATTGTCGGAGAAGTCGTAAGAGAGCGC
TGCCGTTGGATCGAAGCTCGGACGTCGACAGCCCTGGTCGTGAAACTgat
gaaagggaagaagttTCTGGCGGGCGAAGCGCTTACCCGCGCCCAGCCTT
TGTACCCTCATTTCTGCCTCCATTTCCGCCAGAGCACACATTTCGTAAGA
CGGCGGTCAAGGCATCGACAAAATTAGATGACCCAGTCGCTATTCAACGG
CATCGCATCGCTACAAAGCAACTCGTTCTCAAAACTATCGCGCGGCAAAA
TATCGCCTCTGTGAATCCGAAAggtgagaaagagggaaactGTGCGAAAG
CGTAA back to top
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