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Properties
| Property Name | Value |
|---|
| Product | ApaG domain protein |
| Orig transcript id | gnl|cribi|Naga_100002g97.4886.mrna |
| Orig protein id | gnl|cribi|Naga_100002g97.4886 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:476606..478131 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1923 ID=rna1923|Name=rna1923|organism=Nannochloropsis gaditana|type=mRNA|length=4236bp
ACATTTACAGAGAGGTCGACATTGGCCTTCGGCTCTATGTCAAGCTCTTT
CAGCTTCGCCATAGATCGAGGCGGAACCTTCACTGACGTTTTTTGCGTCC
TGCCCGGGAATGGTTTTCGTGTGCTCAAATTGCTGAGTGAAGACCCTGCC
AATTATCCCGACGCGCCGCGTGAGGGAATTCGTCGAATTCTTGAGCAAGA
GACGGGTGTGCCACATCCCCGCGATGAGCCCCTGGACACTTCTCGCATTG
CCTCTATCAAGATGGGAACCACTGTTGCTACCAACGCATTGCTTGAGCGG
AAAGGAGAGAGGTTTGCCCTAGCGATCACGGCTGGTTTCCGTGACCTTTT
GCACATTGGCAACCAATCTAGACCTTCCATTTTTGACCTTAAGGTCCGGA
AACCGGAGGTCTTGTATGAGAGGGTGGTCGAGATCGATGAGCGCGTCGTG
CTCGCGGCTGAAGATGCAGCATCTGACTGCGACTTTGTGGGTGTCACGGG
TGAACGTGTCTGTGTAGAGAAAGCTTTGAATGAGGATATTGCCCGTCAAC
AGCTGCAATCTCTCTACGACTCGGGGTATCGCAGCCTGGCGGTTGTCTTG
CTCCACTCCTACACTTTCCACAGGCACGAGCTAATTTTGGGCAGGCTGGC
CCGGGAGATCGGATTCAAGCAAGTCTCGCTCTCCTCTCAGGTCATGCCGA
TGGTGAAGATGGTCCCTCGAGGGCTGACCACCTGCATAGATGCTTACCTG
ACTCCCGTCATCGACGCCTACTTGGCATCCTTCAAGTCCGGTTTTGACGC
CCGCTTGGAGGAGCGGGTGAGGGTCAGCTTCATGCAGAGCGACGGGGGCC
TGGCCCCCATGAACAATTTCTCCGGGCACCACGCCATACTGTCGGGTCCG
GCGGGGGGAGTGGTGGGGTACGCGGTCACGGCGTCCGGGAGGGCGGGGAG
GGAAAGCGAGGAAGCAGCGCAGGCCGTGATCGGTTTCGACATGGGCGGCA
CTTCCACAGACGTCTCCCGTTACGACGGTGCCTTCCAGCACGTGTTCGAG
ACGACCACGGCAGGGATTACGATCCAATCCCCGCAGCTGGACATCAGCAC
GGTGGCGGCGGGCGGGGGCAGCCGCCTCTTCTTCCGCAACGGCTTGTTCG
TGGTCGGGCCCGAGAGCGCGGGGGCTCACCCGGGGCCGGTCTGCTACCGG
AAGGGCGGTGTCCTGGCAGTCACGGACGCCAACGTCTTGCTCGGTCGCGT
GGTCCCCAGGTACTTCCCGCACATTTTCGGCCCGCGCGAGGACGAGCCTC
TGGACGTGACGGCGGTGCAAGCGGCTTTCGCGGACCTGACCGGGGAGGTG
AACGCCTTTGCGGCCGCCGAGAGCACCCAGGCACGAGAGGGCGGAGGTGA
GGTGTCTAGGGTCCCGAAAACGGCCGACGAGGTTGCCTACGGCTTCCTGC
GCGTGGCGAACGAGGCCATGTGCCGGCCCATCCGGAACCTGACCACCATG
CGCGGTTTCGATATCACCACCCACGCCCTCGCCTGCTTCGGGGGAGCGGG
TCCTCAGCATTGCTGCGCCATCGCAAAGGCTCTAGGCATGCGTCGCATAA
TCGTAAGCCGTTTCTCCGGCGTGCTCTCCGCCTACGGGATCCATCTGGCG
GATATCGTGGTGGAGAAGCAGGAGCCTGCGGCAGGCAAGTACGACGAGGA
GTCGCTATCGACTTTGGAGGCGCGGTTGGATGCATTGGAGAAGGCGGCCC
GGGAGGAACTTGTCGCGCAAGGCTTTGCCGAAGATGCCATCCGTGTAGAA
CGCTTTTTGAATTTAAGATTTGCGGGAACGGATTGCGCGCTAATGACTGC
GAGGTCGGAGGAGGTCAGGACCGGGGGCCGGCAAAGTGGTGGTGGGGAGT
GGGATGGGGGAAGGCTGGGTTCCAGCGGAATGAGCCAGGGTCGGGATTAC
CGTTCTGCCTTCGAGTCCAACTACCAGCGGGAGTTCGGCTTCAAGCTGGA
GGGACGAGACGTCTTGGTCGATGACGTACGGGTCCGAGTCACCGGTCGGG
GTCAGTCGGAGGCGCGGTTCCGCGTGGCCGTCGCTGGAGAAGGCGAGAAG
CCCAGACCGGTCGACTACGGATCTGTGTTCTTTGAAGGCATTGGGCGGGT
GGAGACTCCTCTTTACAAGGCGGAGGGCTTGAAGGCGGGCTTTGTGGTGC
CAGGCCCGGCGATTCTCATGCAGGAGGTTTCGACTGTGGTGGTAGAGCCG
GGCTGCACGGCCCATGTTACATCCGAGGGGAACTTTGAGATCCTGGTGGG
GGCGGTGGAGGAGAAGCGAATCACCACGACCCTCGACCCCATCTACCTAT
CGATCTTCGCCCACCGCTTCATGGGAGTCGCCGAGCAGATGGGCCGTACC
CTGCAAAGAACATCCATCAGTGTGAACATCAAAGAGCGCCTAGATTTCAG
CTGTGCGCTCTTCGACGAGACCGGCGGTCTGGTCGCAAACGCTCCTCATC
TGCCGGTCCACCTGGGGGCGATGCAGGAGGCAGTGCGCTACCAGCTCAAG
CACTGGGCCCGGGAGGGTCTGAGAGAGGGCGACGTGCTCGTCTCGAATCA
CCCTCAGCTGGCCGGCGGGAGCCACTTGCCGGACATCACGGTCATCACGC
CGGTCTTTGACGAAGGCCGGCTTGTCTTCTTCGTGGCCAGTCGAGGGCAC
CACGCGGACGTGGGAGGCCTGGCGCCTGGATCCATGCCGCCCATGTCCAA
GCGCCTGGACGAGGAGGGGGCGGCCATCGTTGCCTTCAAGCTGGTGGAAG
GCGGAGTTTTCCAAGAGGCGGGGATCATAGCTTTGCTGGAGGCTCCCGCC
CGGGTTCCGGGCTGCAGCGGTAGTCGGAATCTGCAAGACAATCTCAGCGA
CCTGCGTGCGCAGGTGGCGGCGAACACGCAGGGGCGCATGTTGATGCAAG
GATTGATCTCCGAGTACGGCCTTGGGGTCATCCAGGCCTACATGCAGCAC
ATTCAGGACAACGCGGAGCAGGCGGTGCGGGCAATGTTGACCAGATTCTC
CCTCTCCCAGGAGCTGCCCGAGGTGGGGACCGTGGGCGCCGAAGATTTCA
TGGACGACGGCACGCCCATCTGCCTGGAGGTGACCATCGACCGGGCTCGG
GGTTCTGCGGTCTTCGACTTTGCTGGGACAGGTCCCGAGCTGTACGGAAA
CCTGAACGCCCCCCCCGCCGTCACTGCATCGGCGGTCATCTACTGCCTAC
GGTGCCTTCTGCCAGACGCGGACATCCCTCTCAACCAGGGCTGCCTGGTG
CCCGTGGAGATACTCATCCCGCCCTCCAGCCTCCTGAACCCCAGCCCGAG
TGCTGCCGTGGTTGGAGGGAACGTGCTGACGTCTCAACGGGTCACGGACG
TAATCTTTCGCGCGTTCGGCGCGGTCGCCGCTTCGCAGGGCTGCATGAAC
AACTTGACGTTCGGAGACGCGTCCATGGGGTACTACGAAACGATCGCCGG
GGGGGCAGGGGCGGGGCCAAGCTGGCATGGCGAGAGTGGTGTTCACACCC
ATATGACGAACACGCGAATCACGGACCCAGAAATCTTGGAACGGCGATTT
CCAGTCATCCTGCGTCAATTCGTGTTGCGGGACGACTCGGGGGGGAAGGG
CGTGTACGCCGGAGGTGATGGTGTGGTCCGTGCCTTGGAGTTTCGCCGCC
CTTTAGTTGTTAGCATTTTGTCTGAGCGACGAGCCTTCCGGCCTTATGGC
TTGGCGGGAGGCGGAGACGGGGCGCGAGGTTTAAATTTGTTGACCTTCGC
AGGAGGAGCCAAATCGTCAAGAAGGCTCGTCAACTTGGGAGGAAAGAATA
CAGTGCAGAGACACCTTGTACCACCTTGGCAACAAAGGCGGTGGCAGCCT
GGGAGAATACAAAGCCACCCAAGAATCGGCCTGATAGGGGATATGTGGAA
GAAATATTGGTCTGGCGAGTTGGGCCATCACGGAAATGCATATTATTATA
GAGCTAGCTCGCGTCTACTTCGACGCTGCACGGTAAAAGCCATCAGTTTC
TCGATTGCCGATCGCTTCGTCCCTGGTACGATTGCATTATACGAAGAAAG
TGTACATCATGTAATTGTAATTATCGAAAGGGGGGGGGAGTCGAGGTTAT
TCGAAATCAGTGTGGTACGATGGGCGGGCAGGCGTAACTGGAATGCCGCC
AAAGGAAAGACGAAACTTTACAATTTGTGTGCATAA back to topprotein sequence of rna1923 >rna1923-protein ID=rna1923-protein|Name=rna1923|organism=Nannochloropsis gaditana|type=polypeptide|length=493bp
MFDVVFLYFTYQANLNLHEQLTQIVLFGLLACAASCTRSQIPACFPTRHN
YKLPRCTGLAGGFIMFCSTSVSQLVVVSVTLLFGSTNAFVSPAIWSRIQS
SLRLHGQRVEAEQPPVLGSVASTSPFRRALTFGERMTALRATAPMSFGDF
GGQQNGDELSFAEVREQLGALESRLAGAMEFGRYDEAKQLVNEITTMKDF
LEKQLNGRQVGSDGVPNGKGSSRASRNPFFDAFGLGGASPMAATMMAPVQ
PSSSAPQPRRSSRPGLGAFGSVVGSRRRPSGSASKSSGGLVNGPREGWVG
KGKSGDLPMEAVRKRHSDITAYGIRVEVFCFFQPGASRPQDNLYQFQCNV
RLTNTNPGDVQLLSRELKIFKADGSPPEYGPASQQLESQPVVGPGSVYMY
MSEFGITCVPEDRKYLGRIEGHFNVAVKDENAVVKVPIAPFWLELPGDTL
AGELEKRGFRIWYTHLELGSSAHAGIKKGIRALEKGIMKGSTT back to topmRNA from alignment at CM002458.1:476606..478131+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1923 ID=rna1923|Name=rna1923|organism=Nannochloropsis gaditana|type=mRNA|length=1526bp|location=Sequence derived from alignment at CM002458.1:476606..478131+ (Nannochloropsis gaditana)
ATGTTTGACGTAGTATTTCTGTACTTTACTTACCAAGCAAACCTTAATCT
TCACGAACAACTCACACAGATAGTTTTATTCGGGCTTCTTGCTTGCGCGG
CATCTTGTACACGAAGCCAGATTCCTGCTTGCTTTCCAACCAGACACAAC
TACAAGCTACCCCGTTGCACAGGACTAGCAGGGGGCTTTATAATGTTCTG
CTCTACATCCGTCAGCCAGCTGGTGGTAGTTTCGGTCACGCTACTTTTTG
GTTCAACAAATGCGTTCGTCAGCCCGGCAATCTGGTCCCGTATTCAAAGC
AGCCTTCGCCTGCACGGTCAACGTGTCGAAGCAGAACAGCCACCTGTTCT
CGGAAGTGTTGCGAGCACTAGCCCCTTCCGGCGCGCTTTAACGTTCGGAG
AACGTATGACAGCACTGCGAGCCACAGCACCAATGAGCTTTGGTGACTTT
GGTGGACAACAAAATGGAGATGAGCTGAGTTTCGCTGAGGTGCGTGAGCA
GCTTGGGGCCCTCGAGTCGCGTTTGGCGGGCGCCATGGAATTCGGGAGAT
ACGATGAGGCGAAGCAGCTCGTCAACGAGATCACTACTATGAAAGATTTT
TTGGAAAAACAATTAAATGGACGCCAGGTTGGGAGTGATGGTGTACCAAA
CGGGAAAGGCAGCTCTCGAGCCTCTCGCAACCCGTTCTTCGACGCCTTCG
GCTTGGGCGGGGCCTCTCCGATGGCGGCGACCATGATGGCTCCCGTACAG
CCTTCCTCAAGCGCCCCACAACCTCGGCGCAGCAGTCGACCGGGCCTTGG
CGCCTTCGGAAGCGTCGTGGGCTCCCGCCGACGGCCCTCGGGCTCGGCCT
CAAAGAGCTCAGGCGGGCTGGTGAATGGTCCCCGGGAGGGCTGGGTGGGG
AAAGGCAAGTCAGGCGATCTTCCCATGGAAGCCGTCAGAAAGCGTCACTC
CGACATCACGGCCTATGGCATTCGCGTGGAGGTATTTTGCTTCTTCCAGC
CAGGTGCCTCGCGTCCTCAGGACAACCTCTACCAGTTCCAGTGCAACGTC
CGCCTCACCAACACGAACCCGGGGGACGTCcagctcctctcccgcgaGCT
CAAGATCTTCAAGGCAGACGGCTCCCCCCCTGAGTACGGCCCAGCCTCGC
AGCAGCTGGAGTCTCAGCCGGTAGTGGGGCCGGGCTCTGTGTACATGTAC
ATGTCCGAGTTCGGAATCACCTGCGTGCCGGAAGACAGGAAGTACCTGGG
CCGAATCGAGGGTCACTTCAACGTGGCCGTGAAGGATGAAAATGCCGTGG
TGAAGGTTCCCATCGCACCATTTTGGCTGGAGCTGCCGGGCGACACCTTG
GTTCTGGCATAAGGGTagcgatggaaggggagaggctcCCACAGGCGGGA
GAGCTGGAAAAGCGCGGTTTCAGGATTTGGTATACACACCTTGAGTTGGG
ATCGAGTGCACACGCAGGGATAAAAAAGGGGATACGAGCGTTGGAAAAAG
GGATCATGAAGGGCTCAACTACGTAA back to topCoding sequence (CDS) from alignment at CM002458.1:476606..478131+ >rna1923 ID=rna1923|Name=rna1923|organism=Nannochloropsis gaditana|type=CDS|length=2964bp|location=Sequence derived from alignment at CM002458.1:476606..478131+ (Nannochloropsis gaditana)
ATGTTTGACGTAGTATTTCTGTACTTTACTTACCAAGCAAACCTTAATCT
TCACGAACAACTCACACAGATAGTTTTATTCGGGCTTCTTGCTTGCGCGG
CATCTTGTACACGAAGCCAGATTCCTGCTTGCTTTCCAACCAGACACAAC
TACAAGCTACCCCGTTGCACAGGACTAGCAGGGGGCTTTATAATGTTCTG
CTCTACATCCGTCAGCCAGCTGGTGGTAGTTTCGGTCACGCTACTTTTTG
GTTCAACAAATGCGTTCGTCAGCCCGGCAATCTGGTCCCGTATTCAAAGC
AGCCTTCGCCTGCACGGTCAACGTGTCGAAGCAGAACAGCCACCTGTTCT
CGGAAGTGTTGCGAGCACTAGCCCCTTCCGGCGCGCTTTAACGTTCGGAG
AACGTATGACAGCACTGCGAGCCACAGCACCAATGAGCTTTGGTGACTTT
GGTGGACAACAAAATGGAGATGAGCTGAGTTTCGCTGAGGTGCGTGAGCA
GCTTGGGGCCCTCGAGTCGCGTTTGGCGGGCGCCATGGAATTCGGGAGAT
ACGATGAGGCGAAGCAGCTCGTCAACGAGATCACTACTATGAAAGATTTT
TTGGAAAAACAATTAAATGGACGCCAGGTTGGGAGTGATGGTGTACCAAA
CGGGAAAGGCAGCTCTCGAGCCTCTCGCAACCCGTTCTTCGACGCCTTCG
GCTTGGGCGGGGCCTCTCCGATGGCGGCGACCATGATGGCTCCCGTACAG
CCTTCCTCAAGCGCCCCACAACCTCGGCGCAGCAGTCGACCGGGCCTTGG
CGCCTTCGGAAGCGTCGTGGGCTCCCGCCGACGGCCCTCGGGCTCGGCCT
CAAAGAGCTCAGGCGGGCTGGTGAATGGTCCCCGGGAGGGCTGGGTGGGG
AAAGGCAAGTCAGGCGATCTTCCCATGGAAGCCGTCAGAAAGCGTCACTC
CGACATCACGGCCTATGGCATTCGCGTGGAGGTATTTTGCTTCTTCCAGC
CAGGTGCCTCGCGTCCTCAGGACAACCTCTACCAGTTCCAGTGCAACGTC
CGCCTCACCAACACGAACCCGGGGGACGTCcagctcctctcccgcgaGCT
CAAGATCTTCAAGGCAGACGGCTCCCCCCCTGAGTACGGCCCAGCCTCGC
AGCAGCTGGAGTCTCAGCCGGTAGTGGGGCCGGGCTCTGTGTACATGTAC
ATGTCCGAGTTCGGAATCACCTGCGTGCCGGAAGACAGGAAGTACCTGGG
CCGAATCGAGGGTCACTTCAACGTGGCCGTGAAGGATGAAAATGCCGTGG
TGAAGGTTCCCATCGCACCATTTTGGCTGGAGCTGCCGGGCGACACCTTG
GCGGGAGAGCTGGAAAAGCGCGGTTTCAGGATTTGGTATACACACCTTGA
GTTGGGATCGAGTGCACACGCAGGGATAAAAAAGGGGATACGAGCGTTGG
AAAAAGGGATCATGAAGGGCTCAACTACGTAAATGTTTGACGTAGTATTT
CTGTACTTTACTTACCAAGCAAACCTTAATCTTCACGAACAACTCACACA
GATAGTTTTATTCGGGCTTCTTGCTTGCGCGGCATCTTGTACACGAAGCC
AGATTCCTGCTTGCTTTCCAACCAGACACAACTACAAGCTACCCCGTTGC
ACAGGACTAGCAGGGGGCTTTATAATGTTCTGCTCTACATCCGTCAGCCA
GCTGGTGGTAGTTTCGGTCACGCTACTTTTTGGTTCAACAAATGCGTTCG
TCAGCCCGGCAATCTGGTCCCGTATTCAAAGCAGCCTTCGCCTGCACGGT
CAACGTGTCGAAGCAGAACAGCCACCTGTTCTCGGAAGTGTTGCGAGCAC
TAGCCCCTTCCGGCGCGCTTTAACGTTCGGAGAACGTATGACAGCACTGC
GAGCCACAGCACCAATGAGCTTTGGTGACTTTGGTGGACAACAAAATGGA
GATGAGCTGAGTTTCGCTGAGGTGCGTGAGCAGCTTGGGGCCCTCGAGTC
GCGTTTGGCGGGCGCCATGGAATTCGGGAGATACGATGAGGCGAAGCAGC
TCGTCAACGAGATCACTACTATGAAAGATTTTTTGGAAAAACAATTAAAT
GGACGCCAGGTTGGGAGTGATGGTGTACCAAACGGGAAAGGCAGCTCTCG
AGCCTCTCGCAACCCGTTCTTCGACGCCTTCGGCTTGGGCGGGGCCTCTC
CGATGGCGGCGACCATGATGGCTCCCGTACAGCCTTCCTCAAGCGCCCCA
CAACCTCGGCGCAGCAGTCGACCGGGCCTTGGCGCCTTCGGAAGCGTCGT
GGGCTCCCGCCGACGGCCCTCGGGCTCGGCCTCAAAGAGCTCAGGCGGGC
TGGTGAATGGTCCCCGGGAGGGCTGGGTGGGGAAAGGCAAGTCAGGCGAT
CTTCCCATGGAAGCCGTCAGAAAGCGTCACTCCGACATCACGGCCTATGG
CATTCGCGTGGAGGTATTTTGCTTCTTCCAGCCAGGTGCCTCGCGTCCTC
AGGACAACCTCTACCAGTTCCAGTGCAACGTCCGCCTCACCAACACGAAC
CCGGGGGACGTCcagctcctctcccgcgaGCTCAAGATCTTCAAGGCAGA
CGGCTCCCCCCCTGAGTACGGCCCAGCCTCGCAGCAGCTGGAGTCTCAGC
CGGTAGTGGGGCCGGGCTCTGTGTACATGTACATGTCCGAGTTCGGAATC
ACCTGCGTGCCGGAAGACAGGAAGTACCTGGGCCGAATCGAGGGTCACTT
CAACGTGGCCGTGAAGGATGAAAATGCCGTGGTGAAGGTTCCCATCGCAC
CATTTTGGCTGGAGCTGCCGGGCGACACCTTGGCGGGAGAGCTGGAAAAG
CGCGGTTTCAGGATTTGGTATACACACCTTGAGTTGGGATCGAGTGCACA
CGCAGGGATAAAAAAGGGGATACGAGCGTTGGAAAAAGGGATCATGAAGG
GCTCAACTACGTAA back to top
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