EWM28767.1, cds1918 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28767.1 vs. NCBI_GenBank
Match: gi|585111190|gb|EWM28767.1| (ApaG domain protein [Nannochloropsis gaditana]) HSP 1 Score: 1013.06 bits (2618), Expect = 0.000e+0 Identity = 493/493 (100.00%), Postives = 493/493 (100.00%), Query Frame = 0
Query: 1 MFDVVFLYFTYQANLNLHEQLTQIVLFGLLACAASCTRSQIPACFPTRHNYKLPRCTGLAGGFIMFCSTSVSQLVVVSVTLLFGSTNAFVSPAIWSRIQSSLRLHGQRVEAEQPPVLGSVASTSPFRRALTFGERMTALRATAPMSFGDFGGQQNGDELSFAEVREQLGALESRLAGAMEFGRYDEAKQLVNEITTMKDFLEKQLNGRQVGSDGVPNGKGSSRASRNPFFDAFGLGGASPMAATMMAPVQPSSSAPQPRRSSRPGLGAFGSVVGSRRRPSGSASKSSGGLVNGPREGWVGKGKSGDLPMEAVRKRHSDITAYGIRVEVFCFFQPGASRPQDNLYQFQCNVRLTNTNPGDVQLLSRELKIFKADGSPPEYGPASQQLESQPVVGPGSVYMYMSEFGITCVPEDRKYLGRIEGHFNVAVKDENAVVKVPIAPFWLELPGDTLAGELEKRGFRIWYTHLELGSSAHAGIKKGIRALEKGIMKGSTT 493
MFDVVFLYFTYQANLNLHEQLTQIVLFGLLACAASCTRSQIPACFPTRHNYKLPRCTGLAGGFIMFCSTSVSQLVVVSVTLLFGSTNAFVSPAIWSRIQSSLRLHGQRVEAEQPPVLGSVASTSPFRRALTFGERMTALRATAPMSFGDFGGQQNGDELSFAEVREQLGALESRLAGAMEFGRYDEAKQLVNEITTMKDFLEKQLNGRQVGSDGVPNGKGSSRASRNPFFDAFGLGGASPMAATMMAPVQPSSSAPQPRRSSRPGLGAFGSVVGSRRRPSGSASKSSGGLVNGPREGWVGKGKSGDLPMEAVRKRHSDITAYGIRVEVFCFFQPGASRPQDNLYQFQCNVRLTNTNPGDVQLLSRELKIFKADGSPPEYGPASQQLESQPVVGPGSVYMYMSEFGITCVPEDRKYLGRIEGHFNVAVKDENAVVKVPIAPFWLELPGDTLAGELEKRGFRIWYTHLELGSSAHAGIKKGIRALEKGIMKGSTT
Sbjct: 1 MFDVVFLYFTYQANLNLHEQLTQIVLFGLLACAASCTRSQIPACFPTRHNYKLPRCTGLAGGFIMFCSTSVSQLVVVSVTLLFGSTNAFVSPAIWSRIQSSLRLHGQRVEAEQPPVLGSVASTSPFRRALTFGERMTALRATAPMSFGDFGGQQNGDELSFAEVREQLGALESRLAGAMEFGRYDEAKQLVNEITTMKDFLEKQLNGRQVGSDGVPNGKGSSRASRNPFFDAFGLGGASPMAATMMAPVQPSSSAPQPRRSSRPGLGAFGSVVGSRRRPSGSASKSSGGLVNGPREGWVGKGKSGDLPMEAVRKRHSDITAYGIRVEVFCFFQPGASRPQDNLYQFQCNVRLTNTNPGDVQLLSRELKIFKADGSPPEYGPASQQLESQPVVGPGSVYMYMSEFGITCVPEDRKYLGRIEGHFNVAVKDENAVVKVPIAPFWLELPGDTLAGELEKRGFRIWYTHLELGSSAHAGIKKGIRALEKGIMKGSTT 493
BLAST of EWM28767.1 vs. NCBI_GenBank
Match: gi|1089087929|emb|SEA19975.1| (ApaG protein [Arachidicoccus rhizosphaerae]) HSP 1 Score: 62.7734 bits (151), Expect = 2.370e-8 Identity = 40/124 (32.26%), Postives = 59/124 (47.58%), Query Frame = 0
Query: 323 GIRVEVFCFFQPGASRPQDNLYQFQCNVRLTNTNPGDVQLLSRELKIFKADGSPPEYGPASQQLESQPVVGPGSVYMYMSEFGITCVPEDRKYLGRIEGHFNVAVKDENAVVKVPIAPFWLELP 446
GI++ V FFQP S P N Y F + + N N V+LLSR IF ++G+ E + +QP + PG+ Y Y+S + +GR+ G + + +D VPI F L P
Sbjct: 8 GIKINVETFFQPDQSSPMVNEYLFAYRITIENHNHFVVRLLSRHWHIFDSNGTTQEV-KGDGVVGAQPYIEPGAAYQYISGCNLN------SEMGRMHGDYLMENQDTKMQFTVPIPAFDLITP 124
BLAST of EWM28767.1 vs. NCBI_GenBank
Match: gi|298710874|emb|CBJ26383.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 65.855 bits (159), Expect = 7.479e-8 Identity = 51/140 (36.43%), Postives = 71/140 (50.71%), Query Frame = 0
Query: 316 HSDITAYGIRVEVFCFFQPGASRPQDNLYQFQCNVRLTNTNPGDVQLLSR--ELKIFKADGSPP-EYGPASQQLESQPVVGPGSVYMYMSEFGITCVP-EDRKYLGRIEGHFNVAVKDE-NAVVKVPIAPFWLELPGDTL 450
S T GIRVEV + P S P + Y F V++TN + VQL+SR E+K +A +P GP + QPV+ PG + Y S ITC P E + LGR++G + + + A + I PF+L LP L
Sbjct: 290 KSVTTTNGIRVEVRSQYYPEQSNPLKDQYIFVYKVKITNQSSQTVQLVSRTWEIKAIEATEAPQLVKGPGV--VGQQPVLEPGQSFEYSSACPITCAPKEGYQVLGRMKGSYLIVMGAVGEAAFEAKIDPFYLILPQAVL 427
BLAST of EWM28767.1 vs. NCBI_GenBank
Match: gi|786223130|ref|WP_045754833.1| (Co2+/Mg2+ efflux protein ApaG [Sphingobacterium sp. PM2-P1-29] >gi|672716246|emb|CDT05420.1| Protein ApaG [Sphingobacterium sp. PM2-P1-29] >gi|1145448668|emb|SJN32240.1| ApaG protein [Sphingobacterium faecium PCAi_F2.5]) HSP 1 Score: 60.8474 bits (146), Expect = 1.172e-7 Identity = 37/122 (30.33%), Postives = 60/122 (49.18%), Query Frame = 0
Query: 323 GIRVEVFCFFQPGASRPQDNLYQFQCNVRLTNTNPGDVQLLSRELKIFKADGSPPE-YGPASQQLESQPVVGPGSVYMYMSEFGITCVPEDRKYLGRIEGHFNVAVKDENAVVKVPIAPFWL 443
GI++ V C FQP S P+ + + F + + N + +QL+SR IF + G E YG + QP++ PG ++ Y S + + +G +EGH+N+ + KV I F L
Sbjct: 8 GIKISVECIFQPEYSNPERDHFMFAYQISIENLSDYSIQLISRYWNIFDSIGDHNEVYGDGI--VGEQPIIEPGQMHQYTSGCNL------KSEMGYMEGHYNMVKLIDETTFKVDIPRFNL 121
BLAST of EWM28767.1 vs. NCBI_GenBank
Match: gi|740909744|ref|WP_038694991.1| (Co2+/Mg2+ efflux protein ApaG [Sphingobacterium sp. ML3W] >gi|676326865|gb|AIM35366.1| cobalt transporter [Sphingobacterium sp. ML3W]) HSP 1 Score: 59.6918 bits (143), Expect = 2.721e-7 Identity = 35/122 (28.69%), Postives = 59/122 (48.36%), Query Frame = 0
Query: 323 GIRVEVFCFFQPGASRPQDNLYQFQCNVRLTNTNPGDVQLLSRELKIFKADGSPPE-YGPASQQLESQPVVGPGSVYMYMSEFGITCVPEDRKYLGRIEGHFNVAVKDENAVVKVPIAPFWL 443
GI++ V C FQP S P+ + F + + N + +QL+SR IF + G E YG + QP++ PG ++ Y S + + +G +EG++N+ + +V I F L
Sbjct: 8 GIKISVACIFQPEYSNPEREHFMFAYQISIENLSDSSIQLISRYWNIFDSVGDHNEIYGDGV--VGEQPIIAPGQIHQYTSGCNL------KSEIGYMEGYYNMVKLIDETTFQVDIPRFNL 121
BLAST of EWM28767.1 vs. NCBI_GenBank
Match: gi|1150102897|ref|XP_020237527.1| (uncharacterized protein LOC109816810 isoform X1 [Cajanus cajan] >gi|1012333189|gb|KYP44591.1| Protein apaG [Cajanus cajan]) HSP 1 Score: 62.3882 bits (150), Expect = 3.231e-7 Identity = 49/138 (35.51%), Postives = 67/138 (48.55%), Query Frame = 0
Query: 314 KRHSDITAYGIRVEVFCFFQPGASRPQDNLYQFQCNVRLTNTNPGDVQLLSRELKIFKADGSPPE-YGPASQQLESQPVVGPGSVYMYMSEFGITCVPEDRKYLGRIEGHFNVAVKDE--NAVVKVPIAPFWLELPGD 448
K SD T GIRV+V + G S+P LY F +R+TN + VQLL R I A+G +G + QP++ PG+ + Y S ++ P GR+EG F + D + V IAPF L L GD
Sbjct: 125 KCSSDATTLGIRVQVRSVYIEGRSQPSKGLYFFAYRIRITNNSDHPVQLLRRHWIITDANGRTENVWGIGV--VGEQPLILPGNSFEYSSACPLS-TPN-----GRMEGDFEMIHVDRVGSRSFNVAIAPFSLSLLGD 254
BLAST of EWM28767.1 vs. NCBI_GenBank
Match: gi|778657818|ref|XP_004152556.2| (PREDICTED: uncharacterized protein LOC101202808 [Cucumis sativus] >gi|700209220|gb|KGN64316.1| hypothetical protein Csa_1G046130 [Cucumis sativus]) HSP 1 Score: 62.3882 bits (150), Expect = 3.399e-7 Identity = 47/136 (34.56%), Postives = 64/136 (47.06%), Query Frame = 0
Query: 317 SDITAYGIRVEVFCFFQPGASRPQDNLYQFQCNVRLTNTNPGDVQLLSRELKIFKADGSPPE-YGPASQQLESQPVVGPGSVYMYMSEFGITCVPEDRKYLGRIEGHFNVAVKDE--NAVVKVPIAPFWLELPGDT 449
SD T GIRV+V + G S+P N Y F +R+TN + VQLL R I A+G +G + QPV+ P + + Y S +T GR+EG F + D V IAPF L + GD+
Sbjct: 156 SDATTLGIRVQVRSVYIEGRSQPSKNQYFFAYRIRITNNSNRPVQLLRRHWIITDANGKTENVWGVGV--IGEQPVILPKTGFEYSSACPLTTAN------GRMEGDFEMKYIDRVGEQSFNVAIAPFSLSIIGDS 283
BLAST of EWM28767.1 vs. NCBI_GenBank
Match: gi|659067260|ref|XP_008438502.1| (PREDICTED: uncharacterized protein LOC103483578 [Cucumis melo]) HSP 1 Score: 62.3882 bits (150), Expect = 3.691e-7 Identity = 47/136 (34.56%), Postives = 64/136 (47.06%), Query Frame = 0
Query: 317 SDITAYGIRVEVFCFFQPGASRPQDNLYQFQCNVRLTNTNPGDVQLLSRELKIFKADGSPPE-YGPASQQLESQPVVGPGSVYMYMSEFGITCVPEDRKYLGRIEGHFNVAVKDE--NAVVKVPIAPFWLELPGDT 449
SD T GIRV+V + G S+P N Y F +R+TN + VQLL R I A+G +G + QPV+ P + + Y S +T GR+EG F + D V IAPF L + GD+
Sbjct: 156 SDATTLGIRVQVRSVYIEGRSQPSKNQYFFAYRIRITNNSNRPVQLLRRHWIITDANGKTENVWGVGV--IGEQPVILPKTGFEYSSACPLTTAN------GRMEGDFEMKYIDRVGEQSFNVAIAPFSLSILGDS 283
BLAST of EWM28767.1 vs. NCBI_GenBank
Match: gi|224133570|ref|XP_002321607.1| (hypothetical protein POPTR_0015s08920g [Populus trichocarpa] >gi|222868603|gb|EEF05734.1| hypothetical protein POPTR_0015s08920g [Populus trichocarpa]) HSP 1 Score: 62.3882 bits (150), Expect = 4.046e-7 Identity = 47/137 (34.31%), Postives = 65/137 (47.45%), Query Frame = 0
Query: 314 KRHSDITAYGIRVEVFCFFQPGASRPQDNLYQFQCNVRLTNTNPGDVQLLSRELKIFKADGSPPEYGPASQQLESQPVVGPGSVYMYMSEFGITCVPEDRKYLGRIEGHFNVAVKDE--NAVVKVPIAPFWLELPGD 448
K SD T GIRV+V + G S+P Y F +R+TN + VQLL R I A+G + + QPV+ P + + Y S + C P GR+EG F + D+ + V IAPF L + GD
Sbjct: 151 KCSSDATTLGIRVQVRSVYIEGRSQPSKGQYFFAYRIRITNNSDRPVQLLRRHWIITDANGKTENFWGVG-VIGEQPVILPRTGFEYSSACPL-CTPN-----GRMEGDFEMKHIDKAGSPTFNVAIAPFSLSILGD 280
BLAST of EWM28767.1 vs. NCBI_GenBank
Match: gi|517455700|ref|WP_018626477.1| (Co2+/Mg2+ efflux protein ApaG [Niabella aurantiaca]) HSP 1 Score: 58.9214 bits (141), Expect = 4.679e-7 Identity = 41/136 (30.15%), Postives = 64/136 (47.06%), Query Frame = 0
Query: 317 SDITAYGIRVEVFCFFQPGASRPQDNLYQFQCNVRLTNTNPGDVQLLSRELKIFKADGSPPEYGPASQQLES------QPVVGPGSVYMYMSEFGITCVPEDRKYLGRIEGHFNVAVKDENAVVKVPIAPFWLELP 446
S + + GI V V FFQP S + + F + L N NP V+LL R IF ++GS +Q+E QPV+ PG Y YMS + R +G+++G + + ++ + + V I F + P
Sbjct: 2 SSLISAGIHVNVEVFFQPEYSNALQSEFMFAYRITLENYNPFSVKLLRRSWYIFDSNGS-------YRQVEGEGVVGVQPVLAPGESYQYMSGCNL------RSEMGKMKGSYEMENQNSHQLFSVEIPEFEMVAP 124 The following BLAST results are available for this feature:
BLAST of EWM28767.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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