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Properties
| Property Name | Value |
|---|
| Product | zinc ion binding protein |
| Orig transcript id | gnl|cribi|Naga_100002g140.4790.mrna |
| Orig protein id | gnl|cribi|Naga_100002g140.4790 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:369375..371807 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1883 ID=rna1883|Name=rna1883|organism=Nannochloropsis gaditana|type=mRNA|length=2212bp
ATGTACGACTGCGATTGCCCAGTGACTCTTACGCCGAGATCAGTCGATTG
CATTCGCCGTCAAGATCGACGTGGCAAGGCACTGACACATCCATCCGGAT
CTGAGATTCGAGGGGCAGCATGGTATGAGACTAGTTCCCCTCTACGACCC
GTCTTGCCTAGCTGCAAATTTCCTGAGGACCGAAAAATGCTAGCTGTCCG
GCGTCTTGTCGTCTCCGCCCCTCGCGGGCGGACATATGCCACGGCTTTCG
CCCGCAATGTCACACACCAGTACCCGATCCTTGCTCCTGCCGTGGCAGCC
GGTATGGTGAGCAGCCTTGTCGGATTAAGCCATCGCTCCCATGATTACGC
AGGCGATGCGGTGCCAGTAGCTCTTTCCACTGCGAGTTCCAATGCACTCA
CAAGCGCACATTTGACCGCGGAGCCCTCGGTATCAATCGCGAAGCGCTTC
CTCAAGTTGCTTTATCGCTTCTTGCAGCAGCTGAAAGCCTTAATTCGTTT
AACGGAAATGATTGCAGTGACAAGCCCCTGTATTATCACATACCCTTTGG
TGGTGCGTCTTCAACACTCTTTCCCCGCGCTGTACGAGCAATGGTGGGAA
TTTTTCGTGAGTGCCGTCACGTATTTGGGGCCCGCCTCCATCAAATTCTT
TCAGTGGGCGAGCAGCCGCCGCGACCTGTTCGACGCCGACTTTTGCGACC
GTATGGCTGTCGTGCAGAACCGAGTGAAACCTCATCCTTGGGCGCAGACG
GACGCGGCTCTGAAAGCCGCCCTCGGAGAGGATTATGCGGATGTCCTGAG
GGTGGAGAAGGAGGTTTTGGGGAGCGGGTGCATCGCCCAGGTCTATAAGG
CACACTTGTTGATGAATTCACAGGAGGCCACGACGCGGTGTGGCGACAGG
ACATCGGTGCTTTCGCTCTCTGCCACGAGATGCGATGCCAACGAGAGGGT
TTGTCCGTCGCCACCAGCCTATCGCGAGGTGGCTGTGAAGGTGGTGCACC
CTCACGTGAAAGGGACCATCGAGACGGACTTAAATCTCTTCCTCACGATT
GCCAGCGCCGTGGAAAGTTTCTCGTTTTTCAAGTACTGGAGCTTCGCGGA
CGCCTTGACGGAGTTCACGAGCTTGATGTACGACCAGATGGACATGAGGA
AAGAGGCCCGCAATTTGCATCGCCTCCGCGCGAATTTCAAGAGCAACCCC
CACATAACCTTTCCTGAACCCGTGGACGACTACGTAAGCGAAGATGTACT
GGTGGAGGAGTTCGTGCATGGCGAGAGCATCAGCACGTACATCGCCATGG
ACAAAGCGCAAACGTCGCCCGAGTTCCGTCAAAAACTCGCAGCCCTCTCC
CTCTCCTCCTTCTTGCAGATGCTTATCACCCATAACTTTGCCCACGCCGA
CTTACACCCGGGTAATGTTCTGGTCCGTCGAAACGGTCAGAATGACAACC
AACCGGTCTTGGCCTTCCTCGACGCAGGAATCTGCACCGAGCTCAGCCGC
CGAAGCCGGAGCGCCTTCGTGAGGATTTTTTACCACGCTGCCCGAGGAGA
CGGGGAGAAGGTGGCTCAAGCCGTGTTAGAAACGGCGCCAGAGCACGACT
GTGTGGACCCGGAGGGCTTTGTGCGCGCCATTGCCGCGATTGTGCAGGAC
ATGCAGGAGGCTGAAGACCGGTCCGAGCTGGAAATGGAAGCAGCGAGGCT
TCAAAGACGGCGAATGAGCAAGGAGGAACAGGCGGCGGCGACACAAAAAG
AGGGGGAGGAGTTGCAACGGAAAGCAGCGGATGCCGTGGGGCGAATCTTC
GACACATGCCGGCATTACCGTGTTAAACTCGACGGAGGCCTCAGCACGGT
GGTCATCGCCACTTTCATCCTGGAGGGCCTTGGCAGGAGCTTGGACCCCG
AGTTGAACATATTCCACGCCGCCTTGCCCTTGTTGATGGCGTCGCCTTTC
TCGTTGTGAGAAATGTCCGGGTGAGGTCACGCATAGGCCGAGCGAGAGCG
CCAAGTGGATAGACAGGTCGGATTCTCCTCGTGTGGAAATTGATCAATGT
GGGCGCAGACGACTGTGAGACTAGTTGTGTTTAAAGAAGGAGAGAAAGAG
AGAGCCAAGAACTGATCGTACTGGCCCGACCGGCCCTCTAGCTGCTCGCA
TATTCGTCAGAGTTGTCGGCGGCTGCGTAATACTATACAAAGAAACAATC
AAACATCTGTCA back to topprotein sequence of rna1883 >rna1883-protein ID=rna1883-protein|Name=rna1883|organism=Nannochloropsis gaditana|type=polypeptide|length=434bp
MLSSTPLSENRRSDTAETTVFRRRDPSQEDIDHAASTLRACVDRDLLSEI
CHGDDVKPSYVPHLLSTFPSPWKGENPLKCRPWSEADFFHRLRTFTPQRW
FGKSLALTPPRCAAQGWVNVDMDTLVCELCQARLTHTDGHEPAPDLLSAS
HTLTCPWRQQACETEVSHFPLVTAQSLLSHIADRLEGCRRLLRAYHGVFS
ISIPEELQTLIDGVKMKKGASSQSARLTLDILADRVQDWLQDVASAAPGV
GEVGGEDEKRGALTLALLGWEAFPLSKGSPTQSGGNIGRPRGDWVLKCGL
CGRSIQASRIADRRGSFGRGRGSEGEGKEEQIPRVKARSVESPLGPLTFD
AVSQHRWWCPWVSRGMDEKGMLGWRQALKAVVGRMRQVEDLGLLGLSEQE
ADMGKHNGLGLDDSLNSPSYSSMYSKVKCLMDSM back to topmRNA from alignment at CM002458.1:369375..371807+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1883 ID=rna1883|Name=rna1883|organism=Nannochloropsis gaditana|type=mRNA|length=2433bp|location=Sequence derived from alignment at CM002458.1:369375..371807+ (Nannochloropsis gaditana)
CGTTAATTCTCAATCTTTCTGACACTCTACACACTTCTTTCGAGCTTAAG
CAGGACTTTCACTCGTTTGACTAGGATTTACCCACCAGGTCTAGTTTGAT
GATTGAAGAAGCCGCATCGTATGTCGCATGCCCAATCCGTTTGGTTGTTT
TTGTGCGTGATGAGTACGTGAGCAAACCCCTACCATAGCACAATAAGAAA
TCGGGCGTTACATACCAGGTTTATAGAAGTTGTGGACAATTGAGCTGTCT
CCAAGAGTTTATCGCGAGAGGTGGGAAGTTGAAATTAGAACGTcgcgagg
aaaaaatgcaaaaTGCCCTCAGACCCTCTAGCATGTGGTAACTTACGCGC
CGGCGAGTAAAGAGAGGTAGGCAATAGGAAATAGCGAGATATATCTGAAG
GCTTTACCCAGACGGGAGACTGGCGGCATAGTGTGAAAGAGACCTAGTGT
TtaagtgggaggaggttaataCGGAAGTCAATCGTGGCGTTGTGTCTTGG
TTCTTCAGCAGTGAAAGCAGCCCCTTCAAGCTGTCACGTAATCAGTGCAC
TACTGTAAGTGGGACAACTTGGACGGAATTCTACAAAGTCCTTCATGaag
actcctcctcccttccaggcTGACTGACTGCTGCACATCTCGTCGCTGCG
ACGAACGAGGGCTCGTGCTGTTCAGTATACCCTGGTATATTGTTCAATCG
TATAACCGTACATCACCCACACCACTGTCACTAGGCATGCTATCTTCTAC
ACCTCTCTCAGAAAATCGTCGAAGTGATACAGCCGAAACGACTGTTTTCA
GGCGGCGGGATCCTAGCCAAGAAGACATCGACCATGCAGCCTCCACCCTA
AGGGCATGTGTAGATCGAGACCTCCTGTCGGAAATCTGCCATGGCGATGA
TGTAAAGCCTTCATACGTTCCTCACTTATTGTCAACCTTTCCCTCGCCTT
GGAAAGGTGGGTGTGCCTTGTGGCCAcggcaggaaaggaggcttTGCGAC
AGATGGAATGTCGGCAGGCCAGCATACAGACCCTCAAGACATTGCTGATC
ATTGTTCGCGACGTTTTTCTCGTTCAAAGGCACCAGGAAAAGATTCCATT
ATGCGCAAGAATACCGTTGCTCACAAACCTACTGACGCCACCACAAAAAG
CAGGTGAGAATCCTCTCAAATGTCGACCGTGGAGTGAGGCCGACTtcttc
catcgcctccgcaCCTTCACGCCGCAACGATGGTTTGGGAAAAGCCTGGC
GCTGACCCCACCGCGTTGTGCCGCACAAGGATGGGTGAATGTTGACATGG
ACACGCTAGTCTGCGAGCTGTACGTTCCTCTTGAAGTGGAAGGAGGCCTC
CACTGTTCGATTCCGCGAGCGTGGACGATGCCTCTGCATTTATATTCTGT
GTACTTCTGGGAACTTCTTGTCGAATTCAATCTTCACTGTTCGCCCTACA
CAGGTGCCAGGCGAGGCTCACGCACACCGACGGCCACGAGCCAGCCCCAG
ACcttctctccgcctcccatACCCTTACATGCCCCTGGCGCCAACAAGCT
TGCGAGACGGAAGTGTCGCATTTTCCTCTCGTCACAGCTCAATCTCTGCT
CTCTCATATAGCCGATAGGCTAGAGGGATGTCGGCGCTTGCTGCGGGCTT
ACCATGGGGTCTTCAGCATTTCAATCCCGGAAGAGCTCCAAACGCTTATC
GACGGCGTCAAAATGAAAAAAGGCGCTTCGTCGCAATCAGCTCGATTGAC
GCTCGACATATTGGCAGACCGTGTGCAGGACTGGCTCCAGGAcgtggcct
cggcggccccAGGTGTGggtgaggtgggaggggaggacgaaaaacGGGGG
GCGTTGACGCTGGCCTTGCTCGGATGGGAAGCCTTTCCTTTGTCGAAGGG
CTCGCCAACGCAGTCTGGAGGGAATATAGGGCGACCGAGAGGGGACTGGG
TGTTGAAATGTGGTCTATGTGGTCGCAGCATTCAAGCGAGTCGCATTGCA
GACCGAAGGGGCAGCTtcgggagagggcgcggatcggaaggtgaagggaa
agaggagcagATACCACGCGTTAAAGCAAGAAGTGTGGAAAGCCCACTGG
GGCCATTAACGTTTGACGCTGTCTCTCAGCACCGATGGTGGTGTCCTTGG
GTATCAAGAGGCATGGATGAGAAGGGGATGCTGGGTTGGCGGCAGGCGTT
GAAGGCGGTCGTGGGGCGGATGCGACAGGTAGAGGACCTCGGATTGTTGG
GATTGAGCGAGCAAGAAGCCGATATGGGTAAACATAATGGTCTAGGTCTC
GATGACTCTCTCAACTCGCCGTCCTACTCGTCGATGTACAGCAAAGTAAA
GTGCCTGATGGACAGCATGTAATGACACAAGTGCTATATTAGATTTCAAA
AACACAAGTGACGTTCCACAGTATCGATTCCCG back to topCoding sequence (CDS) from alignment at CM002458.1:369375..371807+ >rna1883 ID=rna1883|Name=rna1883|organism=Nannochloropsis gaditana|type=CDS|length=3915bp|location=Sequence derived from alignment at CM002458.1:369375..371807+ (Nannochloropsis gaditana)
ATGCTATCTTCTACACCTCTCTCAGAAAATCGTCGAAGTGATACAGCCGA
AACGACTGTTTTCAGGCGGCGGGATCCTAGCCAAGAAGACATCGACCATG
CAGCCTCCACCCTAAGGGCATGTGTAGATCGAGACCTCCTGTCGGAAATC
TGCCATGGCGATGATGTAAAGCCTTCATACGTTCCTCACTTATTGTCAAC
CTTTCCCTCGCCTTGGAAAGGTGAGAATCCTCTCAAATGTCGACCGTGGA
GTGAGGCCGACTtcttccatcgcctccgcaCCTTCACGCCGCAACGATGG
TTTGGGAAAAGCCTGGCGCTGACCCCACCGCGTTGTGCCGCACAAGGATG
GGTGAATGTTGACATGGACACGCTAGTCTGCGAGCTGTGCCAGGCGAGGC
TCACGCACACCGACGGCCACGAGCCAGCCCCAGACcttctctccgcctcc
catACCCTTACATGCCCCTGGCGCCAACAAGCTTGCGAGACGGAAGTGTC
GCATTTTCCTCTCGTCACAGCTCAATCTCTGCTCTCTCATATAGCCGATA
GGCTAGAGGGATGTCGGCGCTTGCTGCGGGCTTACCATGGGGTCTTCAGC
ATTTCAATCCCGGAAGAGCTCCAAACGCTTATCGACGGCGTCAAAATGAA
AAAAGGCGCTTCGTCGCAATCAGCTCGATTGACGCTCGACATATTGGCAG
ACCGTGTGCAGGACTGGCTCCAGGAcgtggcctcggcggccccAGGTGTG
ggtgaggtgggaggggaggacgaaaaacGGGGGGCGTTGACGCTGGCCTT
GCTCGGATGGGAAGCCTTTCCTTTGTCGAAGGGCTCGCCAACGCAGTCTG
GAGGGAATATAGGGCGACCGAGAGGGGACTGGGTGTTGAAATGTGGTCTA
TGTGGTCGCAGCATTCAAGCGAGTCGCATTGCAGACCGAAGGGGCAGCTt
cgggagagggcgcggatcggaaggtgaagggaaagaggagcagATACCAC
GCGTTAAAGCAAGAAGTGTGGAAAGCCCACTGGGGCCATTAACGTTTGAC
GCTGTCTCTCAGCACCGATGGTGGTGTCCTTGGGTATCAAGAGGCATGGA
TGAGAAGGGGATGCTGGGTTGGCGGCAGGCGTTGAAGGCGGTCGTGGGGC
GGATGCGACAGGTAGAGGACCTCGGATTGTTGGGATTGAGCGAGCAAGAA
GCCGATATGGGTAAACATAATGGTCTAGGTCTCGATGACTCTCTCAACTC
GCCGTCCTACTCGTCGATGTACAGCAAAGTAAAGTGCCTGATGGACAGCA
TGTAAATGCTATCTTCTACACCTCTCTCAGAAAATCGTCGAAGTGATACA
GCCGAAACGACTGTTTTCAGGCGGCGGGATCCTAGCCAAGAAGACATCGA
CCATGCAGCCTCCACCCTAAGGGCATGTGTAGATCGAGACCTCCTGTCGG
AAATCTGCCATGGCGATGATGTAAAGCCTTCATACGTTCCTCACTTATTG
TCAACCTTTCCCTCGCCTTGGAAAGGTGAGAATCCTCTCAAATGTCGACC
GTGGAGTGAGGCCGACTtcttccatcgcctccgcaCCTTCACGCCGCAAC
GATGGTTTGGGAAAAGCCTGGCGCTGACCCCACCGCGTTGTGCCGCACAA
GGATGGGTGAATGTTGACATGGACACGCTAGTCTGCGAGCTGTGCCAGGC
GAGGCTCACGCACACCGACGGCCACGAGCCAGCCCCAGACcttctctccg
cctcccatACCCTTACATGCCCCTGGCGCCAACAAGCTTGCGAGACGGAA
GTGTCGCATTTTCCTCTCGTCACAGCTCAATCTCTGCTCTCTCATATAGC
CGATAGGCTAGAGGGATGTCGGCGCTTGCTGCGGGCTTACCATGGGGTCT
TCAGCATTTCAATCCCGGAAGAGCTCCAAACGCTTATCGACGGCGTCAAA
ATGAAAAAAGGCGCTTCGTCGCAATCAGCTCGATTGACGCTCGACATATT
GGCAGACCGTGTGCAGGACTGGCTCCAGGAcgtggcctcggcggccccAG
GTGTGggtgaggtgggaggggaggacgaaaaacGGGGGGCGTTGACGCTG
GCCTTGCTCGGATGGGAAGCCTTTCCTTTGTCGAAGGGCTCGCCAACGCA
GTCTGGAGGGAATATAGGGCGACCGAGAGGGGACTGGGTGTTGAAATGTG
GTCTATGTGGTCGCAGCATTCAAGCGAGTCGCATTGCAGACCGAAGGGGC
AGCTtcgggagagggcgcggatcggaaggtgaagggaaagaggagcagAT
ACCACGCGTTAAAGCAAGAAGTGTGGAAAGCCCACTGGGGCCATTAACGT
TTGACGCTGTCTCTCAGCACCGATGGTGGTGTCCTTGGGTATCAAGAGGC
ATGGATGAGAAGGGGATGCTGGGTTGGCGGCAGGCGTTGAAGGCGGTCGT
GGGGCGGATGCGACAGGTAGAGGACCTCGGATTGTTGGGATTGAGCGAGC
AAGAAGCCGATATGGGTAAACATAATGGTCTAGGTCTCGATGACTCTCTC
AACTCGCCGTCCTACTCGTCGATGTACAGCAAAGTAAAGTGCCTGATGGA
CAGCATGTAAATGCTATCTTCTACACCTCTCTCAGAAAATCGTCGAAGTG
ATACAGCCGAAACGACTGTTTTCAGGCGGCGGGATCCTAGCCAAGAAGAC
ATCGACCATGCAGCCTCCACCCTAAGGGCATGTGTAGATCGAGACCTCCT
GTCGGAAATCTGCCATGGCGATGATGTAAAGCCTTCATACGTTCCTCACT
TATTGTCAACCTTTCCCTCGCCTTGGAAAGGTGAGAATCCTCTCAAATGT
CGACCGTGGAGTGAGGCCGACTtcttccatcgcctccgcaCCTTCACGCC
GCAACGATGGTTTGGGAAAAGCCTGGCGCTGACCCCACCGCGTTGTGCCG
CACAAGGATGGGTGAATGTTGACATGGACACGCTAGTCTGCGAGCTGTGC
CAGGCGAGGCTCACGCACACCGACGGCCACGAGCCAGCCCCAGACcttct
ctccgcctcccatACCCTTACATGCCCCTGGCGCCAACAAGCTTGCGAGA
CGGAAGTGTCGCATTTTCCTCTCGTCACAGCTCAATCTCTGCTCTCTCAT
ATAGCCGATAGGCTAGAGGGATGTCGGCGCTTGCTGCGGGCTTACCATGG
GGTCTTCAGCATTTCAATCCCGGAAGAGCTCCAAACGCTTATCGACGGCG
TCAAAATGAAAAAAGGCGCTTCGTCGCAATCAGCTCGATTGACGCTCGAC
ATATTGGCAGACCGTGTGCAGGACTGGCTCCAGGAcgtggcctcggcggc
cccAGGTGTGggtgaggtgggaggggaggacgaaaaacGGGGGGCGTTGA
CGCTGGCCTTGCTCGGATGGGAAGCCTTTCCTTTGTCGAAGGGCTCGCCA
ACGCAGTCTGGAGGGAATATAGGGCGACCGAGAGGGGACTGGGTGTTGAA
ATGTGGTCTATGTGGTCGCAGCATTCAAGCGAGTCGCATTGCAGACCGAA
GGGGCAGCTtcgggagagggcgcggatcggaaggtgaagggaaagaggag
cagATACCACGCGTTAAAGCAAGAAGTGTGGAAAGCCCACTGGGGCCATT
AACGTTTGACGCTGTCTCTCAGCACCGATGGTGGTGTCCTTGGGTATCAA
GAGGCATGGATGAGAAGGGGATGCTGGGTTGGCGGCAGGCGTTGAAGGCG
GTCGTGGGGCGGATGCGACAGGTAGAGGACCTCGGATTGTTGGGATTGAG
CGAGCAAGAAGCCGATATGGGTAAACATAATGGTCTAGGTCTCGATGACT
CTCTCAACTCGCCGTCCTACTCGTCGATGTACAGCAAAGTAAAGTGCCTG
ATGGACAGCATGTAA back to top
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