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Properties
| Property Name | Value |
|---|
| Product | dual specificity protein phosphatase 12 |
| Orig transcript id | gnl|cribi|Naga_100002g145.4786.mrna |
| Orig protein id | gnl|cribi|Naga_100002g145.4786 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:357867..359710 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1879 ID=rna1879|Name=rna1879|organism=Nannochloropsis gaditana|type=mRNA|length=1362bp
TGAAAGGCAAACATCACAATTGCTGTAGTGCACGAACGCGGATATTTTCA
TCAAAGCAACAGGAGGAACAAAGACAACTCGCACTGGATTTGAGCTTCGA
CTTACCTCCCAGCCTCATCTTAGGCTCCTGGTATAGATGGCGAATACCTA
CGCCGTACTTGTTTTCATGCATTCACTCCTCCTCTTTGTTTCTGTTTCAA
GCAATACTGTGAAGCCGTTTTCCTTTCCCGGCATAAGGAAGACGGCTTTT
GTTGCGCAGCAGCCTCGCCCATCTCGCCTGTCGCCGCTCTCAAGTCGCTC
CTATGCTCCCTCTTCTCCCGCCCTCTTCACGATCCCACACACCAGTGGTA
TCGTCAGTATTCGAAAAGTTTCAAATGTACGTTTTCTTACCCCACTACTT
GCATTGCCACCCGCAACTGCCCAGGACTTGGGAGGTGCCGCCCTTGTCGG
AATGGCCTCAGCAGTGTGGCTTAAGCTGTGGACAAGTCTTGCCATTTCTG
GAGCGATAGACTCCAAAGATTCACGTAAGCTGATACATTGTGGCTCAGGT
CCCCTATTTTTGTTGTGCTGGCCTTTCTTCTCCGCGGAGGGGACGGCACG
ACTTTTTGCCGCTGGAGTACCTTTGCTTCAGATTGTTGCTATGATAGCGT
CAGGATTGGCGAAAGCGCCAAGCCCCGCGAAAAACGATAGCGGTATACGA
GCAGGAGAATCAGCAATGGGAAAGCCAAGTGGGCTTGTAGCAGCCATTTC
CCGAAGTGGAAACCCTGCCGAAGTCCTCCGTGGGCCCCTGATCTACGTAG
TCATTCTGTTGCTCGCTACCGTCGTTTTTTGGAGGGAGAGCGTGGTGGGG
CTGGTTGCTGTCGCCCAGATGGCGGCTGGGGATGGTATGGCGGATATAGT
TGGCAGACGGTGGGGTGCTCAGAAATGGTCGTTTTCCAGCACCAAGAGCT
ATGCCGGCAGCAGCGCCTTTGCCCTCTCTGGTTTCGTCGTCTCGGTCGCT
CTGATCGCTTGGTTTAACTTTTGGGGACTGGTCCCGGCATTAACAGCGGG
GGTGGCATGCAAAGTGGCTTTGATAAGCATATTATGCGCGGCTGTCGAGC
TAGTGCCGTGGGGGGACGATAACATATTTGTGCCCATGGTAGCGTCAGCG
TTGGCCTCCTGGCTGCTGTAGATATGCCCCGGAGGAAAAAGCTTTTTGTG
TGAAATACTGCACCCGAGGACATCATACATAGAATAAGGATGATATCGTG
CGTATATAAAAGACATTTGCCCCTTGATTCTGAAGCAAGACGGGTGAAAA
GGAATAGAAAGTTGAAGACGCATGAGGGCAGAAGAAGCTTTTCAGACTCG
GGTCGTTTTTCA back to topprotein sequence of rna1879 >rna1879-protein ID=rna1879-protein|Name=rna1879|organism=Nannochloropsis gaditana|type=polypeptide|length=549bp
MQSYSKAEDNLGVDVNLLVFNPPLWPPSPRFYVGGVSAAYASGALQLFGL
THLLSLGVTPAAHVAAHFTVGRTSLCLPDLLDVEDQDLLSAAPSLLAFLS
ATTSSDSILVHCQAGQSRSIAAVLMYLIVCKGMDLVDAHAQIARCRPQVC
VNAGFLRQLLFLEDFVARDIFYESLMPRLVTRPLTHNSHGHDTDGILNRT
GCATQEQCTSSGLHSCQLASEHRLYILGKRIQTTCQLSSLDAGSLLEEVE
EMHRALIDQVRLYFRGACTGKHRDPTSEEREEGMVRSAERGKTGGQAVGW
VARCRHCGHVLCTEEEEVRHSAPDFKASRVFDRVKAIGRAAPEAEKFRGY
LEAFERRPLLHLSTVPYAILKQRRKRDGRTDPRRAVRGDGIPDIQQKDGR
RPSAEISSASREGSIRRADDREVGQGCQYMYAYPRRWSLASLLGGGTASG
SAVKPKDRGVEGGGTGGDFGGSEGMRSLRCPGRHCGVIVGATQARVGEVA
GSARGGEACECMEALPMVVVRFRRGCLRIDTVTERRSAWSSVSGVNVDV back to topmRNA from alignment at CM002458.1:357867..359710+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1879 ID=rna1879|Name=rna1879|organism=Nannochloropsis gaditana|type=mRNA|length=1844bp|location=Sequence derived from alignment at CM002458.1:357867..359710+ (Nannochloropsis gaditana)
cacgcgAGAGGGCAACTTGATGCAGGGGGCGCAGAAGCGGGGgcctttaa
cctccccaccccctgggGGAGCTCTACACCTTCTAGTCAACAAGGCACAT
TCCTTTCCCTGAAGAACCGCGATGCAGTCATATAGCAAGGCTGAGGACAA
TTTGGGAGTGGACGTTAACCTCTTGGTATTCAATCCTCCTCTatggcctc
catcccctcgctTCTATGTCGGGGGTGTCTCGGCAGCTTACGCCTCTGGT
GCACTTCAGTTGTTCGGCTTGACGCACTTGCTCTCCCTTGGGGTCACTCC
AGCGGCTCATGTAGCGGCGCATTTTACTGTGGGACGCACATCTCTATGCC
TCCCAGACCTACTGGACGTCGAGGATCAAGACCTCCTGTCTGCGGCGCCG
TCTCTACTAGCTTTTCTTTCGGCCACGACATCGTCTGACTCGATCCTGGT
GCATTGCCAAGCAGGCCAATCACGATCCATCGCTGCCGTGTTGATGTACT
TGATAGTGTGCAAGGGCATGGATCTTGTCGATGCTCACGCCCAGATCGCC
CGCTGTCGGCCTCAGGTCTGCGTCAATGCCGGTTTTCTCCGCCAGCTTCT
CTTTTTGGAGGACTTTGTGGCGCGCGATATCTTCTACGAAAGTCTAATGC
CAAGGCTGGTGACGAGGCCCCTAACACATAATAGTCACGGACATGACACT
GACGGAATTCTCAACCGCACGGGGTGCGCTACTCAGGAGCAATGCACGTC
TTCGGGGCTCCACTCTTGTCAGCTAGCGTCTGAGCATCGCCTGTACATAT
TAGGAAAACGCATTCAAACGACGTGCCAGCTATCTTCTCTGGACGCTGGC
AGCCTcctggaggaagtggaagagatGCATCGGGCACTTATAGATCAGGT
CAGGCTTTACTTTCGGGGTGCGTGCACGGGAAAGCATCGAGATCCTAcaa
gcgaggagagggaggaaggaatggtgCGAAGTGCAGAAAGGGGCAAGACA
GGAGGACAAGCGGTGGGCTGGGTAGCCCGGTGCCGTCATTGTGGGCACGT
TTTgtgcacggaggaggaggaagtgcgtCACTCTGCTCCCGACTTTAAAG
CCTCTCGCGTTTTCGACCGAGTCAAAGCGATCGGGAGAGCCGCCCCGGAA
GCTGAGAAATTTCGAGGATACCTGGAAGCATTTGAAAGGCGGCCGCTACT
GCATTTGTCCACGGTGCCGTACGCCATATTGAAGcagcgaaggaagaggg
acgggcgGACCGATCCAAGGAGAGCAGTGAGGGGAGATGGGATCCCAGAT
ATTCAACAGAAGGATGGAAGACGTCCAAGCGCAGAAATCTCGTCTGCTTC
GAGGGAAGGCTCCATCAGGCGCGCTGATGACAGAGAGGTCGGCCAGGGTT
GTCAGTATATGTACGCCTATCCTCGTCGATGGTCCTTGGCTTCCTTGCTG
GGGGGCGGAACGGCCTCGGGGTCGGCTGTGAAGCCGAAGGACAGAGGCGT
CGAAGGAGGCGGCACCGGAGGGGACTTTGGGGGTTCCGAAGGGATGAGGA
GTCTCAGATGTCCCGGCCGGCATTGTGGGGTGATCGTGGGTGCCACGCAG
GCGAGGGTTGGGGAGGTAGCTGGCAgtgcaagggggggggaggcttgCGA
GTGTATGGAGGCTCTGCCGATGGTAGTAGTGCGATTTCGAAGGGGTTGTT
TGAGGATCGATACGGTAACGGAAAGGAGATCGGCTTGGTCCTCAGTAAGT
GGTGTAAACGTTGATGTATAGTAATAATGCATCCATCTTCTGACCACGCT
AATCTTGAAAAGGGCGAGATAAAATGAGAGTTAAGAGACGCTGA back to topCoding sequence (CDS) from alignment at CM002458.1:357867..359710+ >rna1879 ID=rna1879|Name=rna1879|organism=Nannochloropsis gaditana|type=CDS|length=1650bp|location=Sequence derived from alignment at CM002458.1:357867..359710+ (Nannochloropsis gaditana)
ATGCAGTCATATAGCAAGGCTGAGGACAATTTGGGAGTGGACGTTAACCT
CTTGGTATTCAATCCTCCTCTatggcctccatcccctcgctTCTATGTCG
GGGGTGTCTCGGCAGCTTACGCCTCTGGTGCACTTCAGTTGTTCGGCTTG
ACGCACTTGCTCTCCCTTGGGGTCACTCCAGCGGCTCATGTAGCGGCGCA
TTTTACTGTGGGACGCACATCTCTATGCCTCCCAGACCTACTGGACGTCG
AGGATCAAGACCTCCTGTCTGCGGCGCCGTCTCTACTAGCTTTTCTTTCG
GCCACGACATCGTCTGACTCGATCCTGGTGCATTGCCAAGCAGGCCAATC
ACGATCCATCGCTGCCGTGTTGATGTACTTGATAGTGTGCAAGGGCATGG
ATCTTGTCGATGCTCACGCCCAGATCGCCCGCTGTCGGCCTCAGGTCTGC
GTCAATGCCGGTTTTCTCCGCCAGCTTCTCTTTTTGGAGGACTTTGTGGC
GCGCGATATCTTCTACGAAAGTCTAATGCCAAGGCTGGTGACGAGGCCCC
TAACACATAATAGTCACGGACATGACACTGACGGAATTCTCAACCGCACG
GGGTGCGCTACTCAGGAGCAATGCACGTCTTCGGGGCTCCACTCTTGTCA
GCTAGCGTCTGAGCATCGCCTGTACATATTAGGAAAACGCATTCAAACGA
CGTGCCAGCTATCTTCTCTGGACGCTGGCAGCCTcctggaggaagtggaa
gagatGCATCGGGCACTTATAGATCAGGTCAGGCTTTACTTTCGGGGTGC
GTGCACGGGAAAGCATCGAGATCCTAcaagcgaggagagggaggaaggaa
tggtgCGAAGTGCAGAAAGGGGCAAGACAGGAGGACAAGCGGTGGGCTGG
GTAGCCCGGTGCCGTCATTGTGGGCACGTTTTgtgcacggaggaggagga
agtgcgtCACTCTGCTCCCGACTTTAAAGCCTCTCGCGTTTTCGACCGAG
TCAAAGCGATCGGGAGAGCCGCCCCGGAAGCTGAGAAATTTCGAGGATAC
CTGGAAGCATTTGAAAGGCGGCCGCTACTGCATTTGTCCACGGTGCCGTA
CGCCATATTGAAGcagcgaaggaagagggacgggcgGACCGATCCAAGGA
GAGCAGTGAGGGGAGATGGGATCCCAGATATTCAACAGAAGGATGGAAGA
CGTCCAAGCGCAGAAATCTCGTCTGCTTCGAGGGAAGGCTCCATCAGGCG
CGCTGATGACAGAGAGGTCGGCCAGGGTTGTCAGTATATGTACGCCTATC
CTCGTCGATGGTCCTTGGCTTCCTTGCTGGGGGGCGGAACGGCCTCGGGG
TCGGCTGTGAAGCCGAAGGACAGAGGCGTCGAAGGAGGCGGCACCGGAGG
GGACTTTGGGGGTTCCGAAGGGATGAGGAGTCTCAGATGTCCCGGCCGGC
ATTGTGGGGTGATCGTGGGTGCCACGCAGGCGAGGGTTGGGGAGGTAGCT
GGCAgtgcaagggggggggaggcttgCGAGTGTATGGAGGCTCTGCCGAT
GGTAGTAGTGCGATTTCGAAGGGGTTGTTTGAGGATCGATACGGTAACGG
AAAGGAGATCGGCTTGGTCCTCAGTAAGTGGTGTAAACGTTGATGTATAG back to top
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