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Properties
| Property Name | Value |
|---|
| Product | Phosphatidate cytidylyltransferase |
| Orig transcript id | gnl|cribi|Naga_100002g146.4929.mrna |
| Orig protein id | gnl|cribi|Naga_100002g146.4929 |
| Gene | phytol |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:356258..357619 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1878 ID=rna1878|Name=rna1878|organism=Nannochloropsis gaditana|type=mRNA|length=4442bp
ATGACTGTGTGCTTGTTCTGGATGTAGGGGATGCTTCGGGTGTGAAATGT
GCAGGTGTGCCTGTTCTGAGCGGCCCGGGGGCTAGAGCGAGCGGGTCGCT
GAGATTTATCAGTTGCAAGATATGCCACCTTTTCTTCTAGTTTATATTGC
ACACAACCCACGGGAACTGTCGCGACGGCTGCATTCTTTGCACCCAAGTG
TCTCTCGCCTTCCATATTTTCCTATTTGTCGCGCCGTCATGGTTCACCAC
GCAGCACAGGTGTTAGTGTTGGAAAGCAGCCTGGTTAACCCCCCAACGCT
TGTCTTCCTGCGAGCGCGACTTCCCCGCTGCTGTCGCGGTGGTTTTATCT
TCGCTCGATTCAGCCGCTTACAAAAATGGCGCTTCAGGCCCGTCTCCTGA
CTCGAAGCCTTCGAGGTTTCGGCAATGGTCGCCTTCCTTTCACATCGCCA
CGATGCAACCCACGAGTCTGGCACCATGCATCCCTCTCGTCGTTCACTCG
AGGGGGTCCTCCAAGCCCTCATCCCCTCGGAGTCCTTTCAACCCGTCTCC
CCCGGGTGCGACATCCACAGCGCTCGCTGTCCTCTCCTGCCCCTACATCC
GAAGACCCTCCTTTTAAAAAACTCATGGCGGCCAACCGAGGGGAGATCGC
GACCCGCATAATGCGAGCCACCACTGAGTTGGGGATGGCCTCGGTCGGAA
TCTTTTCCAAGGAGGATCGCTTCACCCAGCACCGCTACAAAGCCGACCAG
GCCTTTCTGGTCGGCGCTGACAAGTCCCCCGTGGGCGCCTACTTAGACAT
CAATTCCATCATCCAGACTGCCAAACGCAACGGCGTCGATGCCATCCACC
CGGGGTATGGCCTGCTCTCGGAAAACCCGAATTTCGCCCGAGCTTGCGCC
GAGAATGGGATCGTCTTTGTGGGCCCTACCGTCGAGCAACTCATCACATT
CGGCGACAAGACAAAGGCGCGCGAGCTGGCCATCAAAGCAGGTGTTCCTG
TGGTGCCCGGGACGGACGGGCCGGTCTCGACGTACGAGGAGGCTCGCTCC
TTCATTGAGGGGATGGACGTAGGCTACCCGGTCATCATCAAGGCAGCCCA
TGGTGGCGGAGGGCGGGGCATGCGCGTGGTCCGGTCCGCGGAGGAGCTCG
AGGAAAATTTCAAACGCGCCTCCTCCGAAGCCTTGAGCGCTTTCGGAAAC
GGGGAGGTGTTCATTGAGCACTACGTGGACCAGCCCCGACACATTGAGGT
CCAGATCTTGGGGGACGGGAGAGGGAACGTCGTCCACCTCTACGACCGGG
ACTGCTCCGTGCAGCGCCGGCACCAGAAGGTGGTGGAGATGGCCCCCGCG
GAGGGCCTGCCTGAGGCCACGCGCCAGGCGCTCTTCCAAGACTCGTTGCG
GCTGACGGGGGCTGCCAAGTACCTGTGCGCAGGCACGGTCGAGTTTTTGG
TCGACAAGCAGGGGAGGCATTTCTTCATCGAGGTGAATCCGCGGGTGCAG
GTGGAGCACACGGTCACGGAGGAGGTGACGGGCATCGACGTCGTCCAGTC
TCAAATCCGTTTGGCCGCGGGGGCCAGCCTGGAGGAGCTAGGTTTGGTTC
AGGAGAAGATCAAGACCTACGGGTATGCCATGCAATGCCGGGTCACCACC
GAGGACCCGAGCCGGGACTTCCAGCCTGATTCGGGGCACATTGAGGTCTT
TCGAGCGCCCGGGGGGATGGGCATTCGGATTGACGACGGCCCGGGCTTTG
TCGGCGCGAACATCACGCCGTACTACGATTCCTTGCTGATCAAGATCACG
AGCAAGGCGGCCAACCGCCACGACGCCATCATGAAGCTTCAGCGTGCGCT
CAAGGAATTCCGGGTGCGCGGTGTCCACACCAACAAGTCATTTGTCCTCA
ACCTGCTTTCCCATCCAGACTTTATCCACGGCCAAGTCGATACCGGCTTC
ATCGCCCGTAATCCTGCTCTCCTGCAACCCGTGTGGTCCTCGAACCGCGG
ACAAAAGCTTTTGAAGTTCATCGGCAACGTCATCGTCAATGGGCCAGAGC
CTTCCCTGGGAGCCACGGGTCCGCCTTGTTCCCCCATCGACCCCATAGTT
CCCACCCTTTCTCCGCTCCCGCCCCGGAAAGAGAAAAGCCTTCGGCAGAT
CTACCTGGAACGGGGACCGAAAGGATTCGCGCAGGCGGTGAGAAAGCACA
AAGGTACCCTCATCACCGACACTACATGGCGGGACGCCCATCAATCCCTC
TTGGCCACCCGCGTGCGCACCCGCGACCTCCTTCGCATTGCCGAGGCGAC
CGGCATTGCCCTGGCCCCTGCCTATTCCCTGGAAAATTGGGGTGGTGCGA
CCTTTGACGTGTCCATGAGATTTTTGCGCGAAGACCCCTGGGACCGACTT
GGGGCCATGCGGGAGGCGGTGCCTGACATCCCTTTCCAAATGCTGCTCCG
GGGCGCGAACGCCGTCGGGTACACCTCCTACCCCGACAATGTGGTTTTTA
AATTCTGCGAGCTGGCTCAAAAGCATGGAATGGACGTGTTCCGAGTCTTT
GATTCCCTGAATTATTTGGAGAACATGCGACTGGGCATTGACGCCGTGGG
CGCCGCGGGAGGGATCGTGGAAGCGGCGATCTGCTACACGGGGGACATCA
CAGACCCGCACCGCAAGCCCTACACCCTCGACTACTACCTGGAATTCGCC
CGCCAACTGGTGGGACTCGGGGTCCACGTCTTGGCCGTGAAAGATATGGC
GGGGCTGTTGAAGCCGGAGGCGGCCTCCTTGTTGGTTGGCAGCCTGCGGA
AGGAGTTCCCGGACGTTCCCTTGCACTTGCACACGCATGACTCGGCCGGG
ACCGGGGTGGCGTCCATGATTGCCGGCGCCAAGGCGGGCGCGGACGCCGT
GGACGCGGCGATGGACGCACTCTCCGGGACCACCAGCCAGCCCTCCCTCG
GCGCCATTGTGGGTGCTCTGCGGCATACCCCCTACGACACAGGCATGGAC
ATGAAAGCGATCAACGCCGTGAACGAGTACTGGGAGGAGTGTCGGGGACT
GTACGCACCCTTCGAGTCGGGGCAGAAAAGCGGGAGTTCGGACGTGTACG
ACCACGAGATGCCAGGTGGGCAGCTGACGAACCTGATGTTCCAGAGCACG
CAATTGGGTCTGGCAGGGCAGTGGGGGCAAATCAAGAAGGCCTACGCCGC
AGCCAATCGCCTGTTGGGGGACATCATTAAGGTCACTCCTTCCAGCAAGG
TGGTGGGGGATCTCGCCCAATTTATGGTGCAAAACAAGCTCACAGAGGAA
GACGTTCGCAAGCGCGCCGAGGAGCTCTCCTTCCCGTCCTCTGTCATTGA
ATATTTCCAAGGCTATCTAGGCATTCCCCCCTTCGGTTTCCCCGAGCCGC
TTCGAACCCATGTCCTGAAAGGGAGAACCTTGCCCAACGGCAAAGCCTGT
TTCGAGGGCCGTCCTGGGGCGGAGTTGCCGCCGTTTGCATTCGAGGACGA
AAAGCAGGGCTTGTTGGATCTGTATGGGAAACACATCCGGGACGTGGATG
TGATGACGCACGCCCAGTACCCGCAGGTGTTTAGTAAATATCAGAGCTTT
TTCAAGGAGTACGACGATGTCTCTGTGCTGGACACGCGCACATTTTTGCA
AGGGATGAAGTTGGGTGCCGAGGTGTCTGTGGAGCTCGAGCACGGGAAGA
CTTTGTTTGTCAAATTAAACAGCGTCGGGCAGGTGGATGCGACGGGGCAC
CGGGACGTGATCTTCGAATTGAATGGCCAGCAGCGTGTGATCAAGACTAA
GGACACCAAGGCCAACGTGAACGTGAAGGTGCGGCCGAAGGCAGACCTGG
GAAAACCCGGCTCTGTCGGAGCCCCGATGCCCGGTTTGGTGGTCGAGGTG
AAGGTGAAAGTCGGGCAAGCCGTAAAGAAAGGGCAGCCACTCTTGGTCCT
GAGCGCGATGAAGATGGAAACAGTGCTCACCTCCCCCGCGGCTGGGACTG
TCAAGACGCTGCTGGTGGGAGCAGGCGACAATATTGCGGGCGGGGACCTG
GTCGTGGAGATAGAGTGAATGCGGAGGGGCGAAAAGCCATTGAGATACAT
GCTCAGTAAAGGGAAAGGAGCAGTCTGGGGCTAGAGGGTACTCTGCGGGA
GCGTCGATCTCTGTGAACATGGATGCAGTCAGGACTTCCAAGGCCGGAGA
GGCATACGTCGTTGATGCTGGAATAGGGAATGAGGACTGAGAGGGGTATC
TTTGAATTTTGTTCACACACGGGAAGACAAAAAAGAAGGAGAAAGCAGGA
GCAGGGGAAGATGTTTTCGTCGACTTTTACGTCTGCGTGCACAGTTACCG
GATGATGATAGAGTGACGGGGATTTAAGGGAAAAACGAGAAATAATAAGG
CATAGTGTCATAGATGAAAAACGACCCGAGTCTGAAAAGCTT back to topprotein sequence of rna1878 >rna1878-protein ID=rna1878-protein|Name=rna1878|organism=Nannochloropsis gaditana|type=polypeptide|length=344bp
MANTYAVLVFMHSLLLFVSVSSNTVKPFSFPGIRKTAFVAQQPRPSRLSP
LSSRSYAPSSPALFTIPHTSGIVSIRKVSNVRFLTPLLALPPATAQDLGG
AALVGMASAVWLKLWTSLAISGAIDSKDSRKLIHCGSGPLFLLCWPFFSA
EGTARLFAAGVPLLQIVAMIASGLAKAPSPAKNDSGIRAGESAMGKPSGL
VAAISRSGNPAEVLRGPLIYVVILLLATVVFWRESVVGLVAVAQMAAGDG
MADIVGRRWGAQKWSFSSTKSYAGSSAFALSGFVVSVALIAWFNFWGLVP
ALTAGVACKVALISILCAAVELVPWGDDNIFVPMVASALASWLL back to topmRNA from alignment at CM002458.1:356258..357619- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1878 ID=rna1878|Name=rna1878|organism=Nannochloropsis gaditana|type=mRNA|length=1362bp|location=Sequence derived from alignment at CM002458.1:356258..357619- (Nannochloropsis gaditana)
TGAAAGGCAAACATCACAATTGCTGTAGTGCACGAACGCGGATATTTTCA
TCAAAGCAACAGGAGGAACAAAGACAACTCGCACTGGATTTGAGCTTCGA
CTTACCTCCCAGCCTCATCTTAGGCTCCTGGTATAGATGGCGAATACCTA
CGCCGTACTTGTTTTCATGCATTCACTCCTCCTCTTTGTTTCTGTTTCAA
GCAATACTGTGAAGCCGTTTTCCTTTCCCGGCATAAGGAAGACGGCTTTT
GTTGCGCAGCAGCCTCGCCCATCTCGCCTGTCGCCGCTCTCAAGTCGCTC
CTATGCTCCCTCTTCTCCCGCCCTCTTCACGATCCCACACACCAGTGGTA
TCGTCAGTATTCGAAAAGTTTCAAATGTACGTTTTCTTACCCCACTACTT
GCATTGCCACCCGCAACTGCCCAGGACTTGGGAGGTGCCGCCCTTGTCGG
AATGGCCTCAGCAGTGTGGCTTAAGCTGTGGACAAGTCTTGCCATTTCTG
GAGCGATAGACTCCAAAGATTCACGTAAGCTGATACATTGTGGCTCAGGT
CCCCTATTTTTGTTGTGCTGGCCTTTCTTCTCCGCGGAGGGGACGGCACG
ACTTTTTGCCGCTGGAGTACCTTTGCTTCAGATTGTTGCTATGATAGCGT
CAGGATTGGCGAAAGCGCCAAGCCCCGCGAAAAACGATAGCGGTATACGA
GCAGGAGAATCAGCAATGGGAAAGCCAAGTGGGCTTGTAGCAGCCATTTC
CCGAAGTGGAAACCCTGCCGAAGTCCTCCGTGGGCCCCTGATCTACGTAG
TCATTCTGTTGCTCGCTACCGTCGTTTTTTGGAGGGAGAGCGTGGTGGGG
CTGGTTGCTGTCGCCCAGATGGCGGCTGGGGATGGTATGGCGGATATAGT
TGGCAGACGGTGGGGTGCTCAGAAATGGTCGTTTTCCAGCACCAAGAGCT
ATGCCGGCAGCAGCGCCTTTGCCCTCTCTGGTTTCGTCGTCTCGGTCGCT
CTGATCGCTTGGTTTAACTTTTGGGGACTGGTCCCGGCATTAACAGCGGG
GGTGGCATGCAAAGTGGCTTTGATAAGCATATTATGCGCGGCTGTCGAGC
TAGTGCCGTGGGGGGACGATAACATATTTGTGCCCATGGTAGCGTCAGCG
TTGGCCTCCTGGCTGCTGTAGATATGCCCCGGAGGAAAAAGCTTTTTGTG
TGAAATACTGCACCCGAGGACATCATACATAGAATAAGGATGATATCGTG
CGTATATAAAAGACATTTGCCCCTTGATTCTGAAGCAAGACGGGTGAAAA
GGAATAGAAAGTTGAAGACGCATGAGGGCAGAAGAAGCTTTTCAGACTCG
GGTCGTTTTTCA back to topCoding sequence (CDS) from alignment at CM002458.1:356258..357619- >rna1878 ID=rna1878|Name=rna1878|organism=Nannochloropsis gaditana|type=CDS|length=1035bp|location=Sequence derived from alignment at CM002458.1:356258..357619- (Nannochloropsis gaditana)
ATGGCGAATACCTACGCCGTACTTGTTTTCATGCATTCACTCCTCCTCTT
TGTTTCTGTTTCAAGCAATACTGTGAAGCCGTTTTCCTTTCCCGGCATAA
GGAAGACGGCTTTTGTTGCGCAGCAGCCTCGCCCATCTCGCCTGTCGCCG
CTCTCAAGTCGCTCCTATGCTCCCTCTTCTCCCGCCCTCTTCACGATCCC
ACACACCAGTGGTATCGTCAGTATTCGAAAAGTTTCAAATGTACGTTTTC
TTACCCCACTACTTGCATTGCCACCCGCAACTGCCCAGGACTTGGGAGGT
GCCGCCCTTGTCGGAATGGCCTCAGCAGTGTGGCTTAAGCTGTGGACAAG
TCTTGCCATTTCTGGAGCGATAGACTCCAAAGATTCACGTAAGCTGATAC
ATTGTGGCTCAGGTCCCCTATTTTTGTTGTGCTGGCCTTTCTTCTCCGCG
GAGGGGACGGCACGACTTTTTGCCGCTGGAGTACCTTTGCTTCAGATTGT
TGCTATGATAGCGTCAGGATTGGCGAAAGCGCCAAGCCCCGCGAAAAACG
ATAGCGGTATACGAGCAGGAGAATCAGCAATGGGAAAGCCAAGTGGGCTT
GTAGCAGCCATTTCCCGAAGTGGAAACCCTGCCGAAGTCCTCCGTGGGCC
CCTGATCTACGTAGTCATTCTGTTGCTCGCTACCGTCGTTTTTTGGAGGG
AGAGCGTGGTGGGGCTGGTTGCTGTCGCCCAGATGGCGGCTGGGGATGGT
ATGGCGGATATAGTTGGCAGACGGTGGGGTGCTCAGAAATGGTCGTTTTC
CAGCACCAAGAGCTATGCCGGCAGCAGCGCCTTTGCCCTCTCTGGTTTCG
TCGTCTCGGTCGCTCTGATCGCTTGGTTTAACTTTTGGGGACTGGTCCCG
GCATTAACAGCGGGGGTGGCATGCAAAGTGGCTTTGATAAGCATATTATG
CGCGGCTGTCGAGCTAGTGCCGTGGGGGGACGATAACATATTTGTGCCCA
TGGTAGCGTCAGCGTTGGCCTCCTGGCTGCTGTAG back to top
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