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Properties
| Property Name | Value |
|---|
| Product | 3-oxoacyl-(acyl-carrier-protein) synthase 2 |
| Orig transcript id | gnl|cribi|Naga_100002g173.4861.mrna |
| Orig protein id | gnl|cribi|Naga_100002g173.4861 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:293497..295576 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1850 ID=rna1850|Name=rna1850|organism=Nannochloropsis gaditana|type=mRNA|length=844bp
CGCGTACAGGTCGCAGGGCGGGGAGGGGGACTCGAGCATGGAGGTGCGGG
TGGCCAGGATTTTCAACACGTTTGGACCGCGGATGCATCCCAACGACGGA
CGGGTGGTCAGCAATTTTATTATCCAGGCGCTTCAAGGGAAGAACATCAC
CATCTACGGCAAAGGAAGGCAGACACGGTCTTTCCAGTATGTGGACGACC
TGGTCTCGGGCCTCATGAAGCTCATGAACAGCGACTACGAACTGCCCGTC
AACCTCGGGAACCCCGACGAATACTCCGTCAAGGACTTCGCCTTGCTTGT
GCGGGAGCTGGTCAGGAACACGGACAGCCAAATAGTGCACTTACCGGCGA
CCAAAGATGACCCCGCGAAGCGCAAACCTGACATCACTATCGCCAAGAAA
GAATTAGGTTGGGAACCAACGGTGTCGGTGCGGGACGGCTTGGCCAAGAC
CATCGAGTATTTCCGAAAAGAACTGGAAGAAACGGGCGAGATCACGCCGA
CGGGACCCGAGGCCGCAAGACCACAGCCGCATGTAGAGGAGAGCAACAGG
AGTTGAGGCAGGCAAAGGGCCCGATCGGGTGACGAATAGCAGGAAAGGGG
GAACTGTGTGGGAAATAAGGACGCGCGGGACGTTGCGTAGGTTGTGTATT
TGAGCAATAGAGGCCAGCGATAGTTTCATGTCATAAGCTGAAGGTCGGGC
GATATCTGGCTTGTGGTGCTCTTTACGAAGAATCTACTCCAGTGACAGGA
GGTAAAGAACAAAATCCAGGAATGTCGCATGCCGCGCAGACCTGGGACTT
TTCGGAGCGTTTTCTCCCATGAAGCACGAGTCACAAATCATACC back to topprotein sequence of rna1850 >rna1850-protein ID=rna1850-protein|Name=rna1850|organism=Nannochloropsis gaditana|type=polypeptide|length=458bp
MRLSTLSVLGPALGCAFLLFDSSLAYLPSYMRGSKGQIYMKEKSQRVVVT
GLGPISAVGIGKDAFWKALLEGKSGIDRISGFDPSGLTCQIGAEVKDFDA
KPYFKDRKSAVRNDRVTLMGVAASRIAVDDAKLDLSSVEGERFGVVVGSA
FGGLQTLETQIQTMNEKGPGSVSPFAVPSLLSNLISGVIALENGAKGPNY
VVNSACAASTHALGLAYAHIAHGEADVCLAGGSEAAVTPFGFAGFCSMKA
MATKYNDNPSQGSRPFDKDRCGFVMGEGAGMVVLESLEHAQKRGAHIYAE
VAGFGQACDAHHITTPHPEGAGLAQAITLALEDAGMAKEDLTYINAHGTS
TAYNDKFETLAVKKALGEEVAKKMYLSSTKGSTGHTLGAAGGLEAIATVL
AIETKTLPPTINYETPDPDCDLNVVPNKPITLNEITGAASQSAGFGGHDS
VVVFKPFK back to topmRNA from alignment at CM002458.1:293497..295576+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1850 ID=rna1850|Name=rna1850|organism=Nannochloropsis gaditana|type=mRNA|length=2080bp|location=Sequence derived from alignment at CM002458.1:293497..295576+ (Nannochloropsis gaditana)
ATGCGGCTTTCGACTCTCAGCGTCTTGGGCCCTGCACTAGGATGCGCCTT
CCTACTATTCGATTCAAGCCTGGCATATCTACCGAGCTATATGCGTGGGT
CTAAGGTGAGAATCTTCTGCTTGTGttttttcattttccagTCTCTTGAG
GAGGTACTACCTAATAGATGCTTGAGCCGCCGTCAAAGTACATCCATCAA
GGCCTCATGTCCACCAAAAAGCCTCCCCATGACCAGAATGTACTATTTTG
ATCCTTTTCTACCTGTTCGTTTCTAGATATTGCCATTTTGGAGAAAGATT
GGAGTTGCCAACTGCCTCACCAATGTCCTACATATTTTCATCGCATTCAT
CCGCTCTCCTCGACCTGTCTCCACACGGTCaatgtcctctccctttccat
gaTTAGGGACAAATCTATATGAAGGAAAAAAGTCAGCGTGTCGTCGTAAC
GGGTCTTGGACCCATATCCGCTGTGGGTATTGGGAAAGATGCCTTCTGGA
AAGCGCTGTTGGAAGGGAAAAGTGGTATCGATCGAATCAGCGGCTTTGAC
CCCTCCGGCCTCACTTGCCAGATTGGCGCCGAAGTAAAAGATTTCGATGC
CAAGCCTTATTTCAAGGATAGGAAGAGCGCAGTTCGTAACGACAGGGTGA
CCTTGATGGGAGTGGCCGCCTCGCGCATTGCTGTGGACGATGCCAAGCTG
GATTTATcgtcggtggagggggaacgcTTCGGGGTTGTGGTAGGGTCCGC
GTTCGGAGGGCTTCAAACGCTTGAGACCCAGATTCAGACCATGAACGAAA
AGGGTCCGGGCTCCGTGTCTCCCTTCGCCGTGCCAAGTTTGTTGTCCAAC
TTGATTTCGGGGGTGATTGCGttggaaaatggcgcgaaaggtgAGGAATC
AGATCGGAAACGGCCTTAGGTCTAAATGATTCGCTCAGCATGCCTGCCAT
ATCACGTTATGGAAGGGGTGAGTCCTCGTACAGTCCGACTCATccgcctt
ccattcctcccgtttcttcctcccaggccccaaCTACGTCGTGAACAGCG
CCTGTGCCGCGTCCACCCACGCCCTGGGGCTGGCCTACGCACACATTGCC
CACGGAGAGGCGGACGTGTGCCTGGCGGGCGGGTCGGAAGCGGCTGTGAC
CCCGTTCGGATTCGCGGGCTTTTGCTCGATGAAAGGTATTTGTCAAGGGG
AAGACCGGAGGGGGACATGACGCGCGATGGGGTCCATGTACGTGATATCG
ATGCCCGATTTCCTTGCTCTTTTCCACCACAGCCATGGCCACAAAGTACA
ACGACAACCCCAGCCAAGGATCCCGACCTTTCGATAAGGACCGTTGCGGT
TTTGTcatgggagagggggccgggaTGGTGGTGCTGGAAAGCTTGGAGCA
TGCGCAGAAACGGGGTGCGCATATTTACGCCGAGGTGGCGGGCTTTGGGC
AGGCGTGCGACGCCCACCATATCACCACTCCGCACCCTGAGGGAGCGGGC
TTGGCCCAGGCAATTACGTTGGCattggaggacgcgggtaTGGCGAAAGA
GGACTTGACCTACATTAATGCCCATGGCACCAGCACCGCCTACAATGACA
AATTCGAGACGCTGGCGGTCAAGAAGGccttgggagaggaggtggccaaa
AAGATGTACTTGTCGTCGACCAAGGGATCGACGGGCCACACGCTGGGAGC
GGCGGGTGGACTGGAAGCAATCGCGACAGTCCTGGCCATAGAGACGAAGA
CACTGCCGCCTACGATCAATTACGAGACGCCTGACCCGGTGGGTGGCata
agagagaaaggagacatgcgggagggtgggaaaattTCCACAGAGACTCT
CATTGCATGGAATACCTGTGCGGGAGATCCCTGTCCTCTGTGTGTCTCCT
CACGAATGCTCTGCTTTCTTTGTCCCCTTTTTCTGGCCGTTTCACACGTC
TGCACAGGATTGCGACCTAAACGTAGTGCCGAACAAGCCCATCACCCTGA
ATGAGATCACAGGGGCCGCCTCTCAGTCCGCTGGCTTCGGCGGGCATGAC
TCGGTGGTGGTGTTCAAACCATTCAAATAA back to topCoding sequence (CDS) from alignment at CM002458.1:293497..295576+ >rna1850 ID=rna1850|Name=rna1850|organism=Nannochloropsis gaditana|type=CDS|length=6885bp|location=Sequence derived from alignment at CM002458.1:293497..295576+ (Nannochloropsis gaditana)
ATGCGGCTTTCGACTCTCAGCGTCTTGGGCCCTGCACTAGGATGCGCCTT
CCTACTATTCGATTCAAGCCTGGCATATCTACCGAGCTATATGCGTGGGT
CTAAGGGACAAATCTATATGAAGGAAAAAAGTCAGCGTGTCGTCGTAACG
GGTCTTGGACCCATATCCGCTGTGGGTATTGGGAAAGATGCCTTCTGGAA
AGCGCTGTTGGAAGGGAAAAGTGGTATCGATCGAATCAGCGGCTTTGACC
CCTCCGGCCTCACTTGCCAGATTGGCGCCGAAGTAAAAGATTTCGATGCC
AAGCCTTATTTCAAGGATAGGAAGAGCGCAGTTCGTAACGACAGGGTGAC
CTTGATGGGAGTGGCCGCCTCGCGCATTGCTGTGGACGATGCCAAGCTGG
ATTTATcgtcggtggagggggaacgcTTCGGGGTTGTGGTAGGGTCCGCG
TTCGGAGGGCTTCAAACGCTTGAGACCCAGATTCAGACCATGAACGAAAA
GGGTCCGGGCTCCGTGTCTCCCTTCGCCGTGCCAAGTTTGTTGTCCAACT
TGATTTCGGGGGTGATTGCGttggaaaatggcgcgaaaggccccaaCTAC
GTCGTGAACAGCGCCTGTGCCGCGTCCACCCACGCCCTGGGGCTGGCCTA
CGCACACATTGCCCACGGAGAGGCGGACGTGTGCCTGGCGGGCGGGTCGG
AAGCGGCTGTGACCCCGTTCGGATTCGCGGGCTTTTGCTCGATGAAAGCC
ATGGCCACAAAGTACAACGACAACCCCAGCCAAGGATCCCGACCTTTCGA
TAAGGACCGTTGCGGTTTTGTcatgggagagggggccgggaTGGTGGTGC
TGGAAAGCTTGGAGCATGCGCAGAAACGGGGTGCGCATATTTACGCCGAG
GTGGCGGGCTTTGGGCAGGCGTGCGACGCCCACCATATCACCACTCCGCA
CCCTGAGGGAGCGGGCTTGGCCCAGGCAATTACGTTGGCattggaggacg
cgggtaTGGCGAAAGAGGACTTGACCTACATTAATGCCCATGGCACCAGC
ACCGCCTACAATGACAAATTCGAGACGCTGGCGGTCAAGAAGGccttggg
agaggaggtggccaaaAAGATGTACTTGTCGTCGACCAAGGGATCGACGG
GCCACACGCTGGGAGCGGCGGGTGGACTGGAAGCAATCGCGACAGTCCTG
GCCATAGAGACGAAGACACTGCCGCCTACGATCAATTACGAGACGCCTGA
CCCGGATTGCGACCTAAACGTAGTGCCGAACAAGCCCATCACCCTGAATG
AGATCACAGGGGCCGCCTCTCAGTCCGCTGGCTTCGGCGGGCATGACTCG
GTGGTGGTGTTCAAACCATTCAAATAAATGCGGCTTTCGACTCTCAGCGT
CTTGGGCCCTGCACTAGGATGCGCCTTCCTACTATTCGATTCAAGCCTGG
CATATCTACCGAGCTATATGCGTGGGTCTAAGGGACAAATCTATATGAAG
GAAAAAAGTCAGCGTGTCGTCGTAACGGGTCTTGGACCCATATCCGCTGT
GGGTATTGGGAAAGATGCCTTCTGGAAAGCGCTGTTGGAAGGGAAAAGTG
GTATCGATCGAATCAGCGGCTTTGACCCCTCCGGCCTCACTTGCCAGATT
GGCGCCGAAGTAAAAGATTTCGATGCCAAGCCTTATTTCAAGGATAGGAA
GAGCGCAGTTCGTAACGACAGGGTGACCTTGATGGGAGTGGCCGCCTCGC
GCATTGCTGTGGACGATGCCAAGCTGGATTTATcgtcggtggagggggaa
cgcTTCGGGGTTGTGGTAGGGTCCGCGTTCGGAGGGCTTCAAACGCTTGA
GACCCAGATTCAGACCATGAACGAAAAGGGTCCGGGCTCCGTGTCTCCCT
TCGCCGTGCCAAGTTTGTTGTCCAACTTGATTTCGGGGGTGATTGCGttg
gaaaatggcgcgaaaggccccaaCTACGTCGTGAACAGCGCCTGTGCCGC
GTCCACCCACGCCCTGGGGCTGGCCTACGCACACATTGCCCACGGAGAGG
CGGACGTGTGCCTGGCGGGCGGGTCGGAAGCGGCTGTGACCCCGTTCGGA
TTCGCGGGCTTTTGCTCGATGAAAGCCATGGCCACAAAGTACAACGACAA
CCCCAGCCAAGGATCCCGACCTTTCGATAAGGACCGTTGCGGTTTTGTca
tgggagagggggccgggaTGGTGGTGCTGGAAAGCTTGGAGCATGCGCAG
AAACGGGGTGCGCATATTTACGCCGAGGTGGCGGGCTTTGGGCAGGCGTG
CGACGCCCACCATATCACCACTCCGCACCCTGAGGGAGCGGGCTTGGCCC
AGGCAATTACGTTGGCattggaggacgcgggtaTGGCGAAAGAGGACTTG
ACCTACATTAATGCCCATGGCACCAGCACCGCCTACAATGACAAATTCGA
GACGCTGGCGGTCAAGAAGGccttgggagaggaggtggccaaaAAGATGT
ACTTGTCGTCGACCAAGGGATCGACGGGCCACACGCTGGGAGCGGCGGGT
GGACTGGAAGCAATCGCGACAGTCCTGGCCATAGAGACGAAGACACTGCC
GCCTACGATCAATTACGAGACGCCTGACCCGGATTGCGACCTAAACGTAG
TGCCGAACAAGCCCATCACCCTGAATGAGATCACAGGGGCCGCCTCTCAG
TCCGCTGGCTTCGGCGGGCATGACTCGGTGGTGGTGTTCAAACCATTCAA
ATAAATGCGGCTTTCGACTCTCAGCGTCTTGGGCCCTGCACTAGGATGCG
CCTTCCTACTATTCGATTCAAGCCTGGCATATCTACCGAGCTATATGCGT
GGGTCTAAGGGACAAATCTATATGAAGGAAAAAAGTCAGCGTGTCGTCGT
AACGGGTCTTGGACCCATATCCGCTGTGGGTATTGGGAAAGATGCCTTCT
GGAAAGCGCTGTTGGAAGGGAAAAGTGGTATCGATCGAATCAGCGGCTTT
GACCCCTCCGGCCTCACTTGCCAGATTGGCGCCGAAGTAAAAGATTTCGA
TGCCAAGCCTTATTTCAAGGATAGGAAGAGCGCAGTTCGTAACGACAGGG
TGACCTTGATGGGAGTGGCCGCCTCGCGCATTGCTGTGGACGATGCCAAG
CTGGATTTATcgtcggtggagggggaacgcTTCGGGGTTGTGGTAGGGTC
CGCGTTCGGAGGGCTTCAAACGCTTGAGACCCAGATTCAGACCATGAACG
AAAAGGGTCCGGGCTCCGTGTCTCCCTTCGCCGTGCCAAGTTTGTTGTCC
AACTTGATTTCGGGGGTGATTGCGttggaaaatggcgcgaaaggccccaa
CTACGTCGTGAACAGCGCCTGTGCCGCGTCCACCCACGCCCTGGGGCTGG
CCTACGCACACATTGCCCACGGAGAGGCGGACGTGTGCCTGGCGGGCGGG
TCGGAAGCGGCTGTGACCCCGTTCGGATTCGCGGGCTTTTGCTCGATGAA
AGCCATGGCCACAAAGTACAACGACAACCCCAGCCAAGGATCCCGACCTT
TCGATAAGGACCGTTGCGGTTTTGTcatgggagagggggccgggaTGGTG
GTGCTGGAAAGCTTGGAGCATGCGCAGAAACGGGGTGCGCATATTTACGC
CGAGGTGGCGGGCTTTGGGCAGGCGTGCGACGCCCACCATATCACCACTC
CGCACCCTGAGGGAGCGGGCTTGGCCCAGGCAATTACGTTGGCattggag
gacgcgggtaTGGCGAAAGAGGACTTGACCTACATTAATGCCCATGGCAC
CAGCACCGCCTACAATGACAAATTCGAGACGCTGGCGGTCAAGAAGGcct
tgggagaggaggtggccaaaAAGATGTACTTGTCGTCGACCAAGGGATCG
ACGGGCCACACGCTGGGAGCGGCGGGTGGACTGGAAGCAATCGCGACAGT
CCTGGCCATAGAGACGAAGACACTGCCGCCTACGATCAATTACGAGACGC
CTGACCCGGATTGCGACCTAAACGTAGTGCCGAACAAGCCCATCACCCTG
AATGAGATCACAGGGGCCGCCTCTCAGTCCGCTGGCTTCGGCGGGCATGA
CTCGGTGGTGGTGTTCAAACCATTCAAATAAATGCGGCTTTCGACTCTCA
GCGTCTTGGGCCCTGCACTAGGATGCGCCTTCCTACTATTCGATTCAAGC
CTGGCATATCTACCGAGCTATATGCGTGGGTCTAAGGGACAAATCTATAT
GAAGGAAAAAAGTCAGCGTGTCGTCGTAACGGGTCTTGGACCCATATCCG
CTGTGGGTATTGGGAAAGATGCCTTCTGGAAAGCGCTGTTGGAAGGGAAA
AGTGGTATCGATCGAATCAGCGGCTTTGACCCCTCCGGCCTCACTTGCCA
GATTGGCGCCGAAGTAAAAGATTTCGATGCCAAGCCTTATTTCAAGGATA
GGAAGAGCGCAGTTCGTAACGACAGGGTGACCTTGATGGGAGTGGCCGCC
TCGCGCATTGCTGTGGACGATGCCAAGCTGGATTTATcgtcggtggaggg
ggaacgcTTCGGGGTTGTGGTAGGGTCCGCGTTCGGAGGGCTTCAAACGC
TTGAGACCCAGATTCAGACCATGAACGAAAAGGGTCCGGGCTCCGTGTCT
CCCTTCGCCGTGCCAAGTTTGTTGTCCAACTTGATTTCGGGGGTGATTGC
GttggaaaatggcgcgaaaggccccaaCTACGTCGTGAACAGCGCCTGTG
CCGCGTCCACCCACGCCCTGGGGCTGGCCTACGCACACATTGCCCACGGA
GAGGCGGACGTGTGCCTGGCGGGCGGGTCGGAAGCGGCTGTGACCCCGTT
CGGATTCGCGGGCTTTTGCTCGATGAAAGCCATGGCCACAAAGTACAACG
ACAACCCCAGCCAAGGATCCCGACCTTTCGATAAGGACCGTTGCGGTTTT
GTcatgggagagggggccgggaTGGTGGTGCTGGAAAGCTTGGAGCATGC
GCAGAAACGGGGTGCGCATATTTACGCCGAGGTGGCGGGCTTTGGGCAGG
CGTGCGACGCCCACCATATCACCACTCCGCACCCTGAGGGAGCGGGCTTG
GCCCAGGCAATTACGTTGGCattggaggacgcgggtaTGGCGAAAGAGGA
CTTGACCTACATTAATGCCCATGGCACCAGCACCGCCTACAATGACAAAT
TCGAGACGCTGGCGGTCAAGAAGGccttgggagaggaggtggccaaaAAG
ATGTACTTGTCGTCGACCAAGGGATCGACGGGCCACACGCTGGGAGCGGC
GGGTGGACTGGAAGCAATCGCGACAGTCCTGGCCATAGAGACGAAGACAC
TGCCGCCTACGATCAATTACGAGACGCCTGACCCGGATTGCGACCTAAAC
GTAGTGCCGAACAAGCCCATCACCCTGAATGAGATCACAGGGGCCGCCTC
TCAGTCCGCTGGCTTCGGCGGGCATGACTCGGTGGTGGTGTTCAAACCAT
TCAAATAAATGCGGCTTTCGACTCTCAGCGTCTTGGGCCCTGCACTAGGA
TGCGCCTTCCTACTATTCGATTCAAGCCTGGCATATCTACCGAGCTATAT
GCGTGGGTCTAAGGGACAAATCTATATGAAGGAAAAAAGTCAGCGTGTCG
TCGTAACGGGTCTTGGACCCATATCCGCTGTGGGTATTGGGAAAGATGCC
TTCTGGAAAGCGCTGTTGGAAGGGAAAAGTGGTATCGATCGAATCAGCGG
CTTTGACCCCTCCGGCCTCACTTGCCAGATTGGCGCCGAAGTAAAAGATT
TCGATGCCAAGCCTTATTTCAAGGATAGGAAGAGCGCAGTTCGTAACGAC
AGGGTGACCTTGATGGGAGTGGCCGCCTCGCGCATTGCTGTGGACGATGC
CAAGCTGGATTTATcgtcggtggagggggaacgcTTCGGGGTTGTGGTAG
GGTCCGCGTTCGGAGGGCTTCAAACGCTTGAGACCCAGATTCAGACCATG
AACGAAAAGGGTCCGGGCTCCGTGTCTCCCTTCGCCGTGCCAAGTTTGTT
GTCCAACTTGATTTCGGGGGTGATTGCGttggaaaatggcgcgaaaggcc
ccaaCTACGTCGTGAACAGCGCCTGTGCCGCGTCCACCCACGCCCTGGGG
CTGGCCTACGCACACATTGCCCACGGAGAGGCGGACGTGTGCCTGGCGGG
CGGGTCGGAAGCGGCTGTGACCCCGTTCGGATTCGCGGGCTTTTGCTCGA
TGAAAGCCATGGCCACAAAGTACAACGACAACCCCAGCCAAGGATCCCGA
CCTTTCGATAAGGACCGTTGCGGTTTTGTcatgggagagggggccgggaT
GGTGGTGCTGGAAAGCTTGGAGCATGCGCAGAAACGGGGTGCGCATATTT
ACGCCGAGGTGGCGGGCTTTGGGCAGGCGTGCGACGCCCACCATATCACC
ACTCCGCACCCTGAGGGAGCGGGCTTGGCCCAGGCAATTACGTTGGCatt
ggaggacgcgggtaTGGCGAAAGAGGACTTGACCTACATTAATGCCCATG
GCACCAGCACCGCCTACAATGACAAATTCGAGACGCTGGCGGTCAAGAAG
GccttgggagaggaggtggccaaaAAGATGTACTTGTCGTCGACCAAGGG
ATCGACGGGCCACACGCTGGGAGCGGCGGGTGGACTGGAAGCAATCGCGA
CAGTCCTGGCCATAGAGACGAAGACACTGCCGCCTACGATCAATTACGAG
ACGCCTGACCCGGATTGCGACCTAAACGTAGTGCCGAACAAGCCCATCAC
CCTGAATGAGATCACAGGGGCCGCCTCTCAGTCCGCTGGCTTCGGCGGGC
ATGACTCGGTGGTGGTGTTCAAACCATTCAAATAA back to top
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