EWM28742.1, cds1845 (CDS) Nannochloropsis gaditana

Overview
NameEWM28742.1
Unique Namecds1845
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:293497..293601 +
Alignment locationCM002458.1:293903..294386 +
Alignment locationCM002458.1:294523..294681 +
Alignment locationCM002458.1:294779..295284 +
Alignment locationCM002458.1:295454..295576 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28742.1
Product3-oxoacyl-(acyl-carrier-protein) synthase 2
Orig transcript idgnl|cribi|Naga_100002g173.4861.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:293497..293601 +
CM002458.1supercontigCM002458.1:293903..294386 +
CM002458.1supercontigCM002458.1:294523..294681 +
CM002458.1supercontigCM002458.1:294779..295284 +
CM002458.1supercontigCM002458.1:295454..295576 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
GO:0008152metabolic process
GO:0006633fatty acid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0003824catalytic activity
GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR016039Thiolase-like
IPR018201Ketoacyl_synth_AS
IPR014031Ketoacyl_synth_C
IPR014030Ketoacyl_synth_N
IPR016038Thiolase-like_subgr
IPR0175683-oxoacyl-ACP_synth-2
IPR020841PKS_Beta-ketoAc_synthase_dom
Homology
BLAST of EWM28742.1 vs. NCBI_GenBank
Match: gi|585111165|gb|EWM28742.1| (3-oxoacyl-(acyl-carrier-protein) synthase 2 [Nannochloropsis gaditana])

HSP 1 Score: 936.791 bits (2420), Expect = 0.000e+0
Identity = 458/458 (100.00%), Postives = 458/458 (100.00%), Query Frame = 0
Query:    1 MRLSTLSVLGPALGCAFLLFDSSLAYLPSYMRGSKGQIYMKEKSQRVVVTGLGPISAVGIGKDAFWKALLEGKSGIDRISGFDPSGLTCQIGAEVKDFDAKPYFKDRKSAVRNDRVTLMGVAASRIAVDDAKLDLSSVEGERFGVVVGSAFGGLQTLETQIQTMNEKGPGSVSPFAVPSLLSNLISGVIALENGAKGPNYVVNSACAASTHALGLAYAHIAHGEADVCLAGGSEAAVTPFGFAGFCSMKAMATKYNDNPSQGSRPFDKDRCGFVMGEGAGMVVLESLEHAQKRGAHIYAEVAGFGQACDAHHITTPHPEGAGLAQAITLALEDAGMAKEDLTYINAHGTSTAYNDKFETLAVKKALGEEVAKKMYLSSTKGSTGHTLGAAGGLEAIATVLAIETKTLPPTINYETPDPDCDLNVVPNKPITLNEITGAASQSAGFGGHDSVVVFKPFK 458
            MRLSTLSVLGPALGCAFLLFDSSLAYLPSYMRGSKGQIYMKEKSQRVVVTGLGPISAVGIGKDAFWKALLEGKSGIDRISGFDPSGLTCQIGAEVKDFDAKPYFKDRKSAVRNDRVTLMGVAASRIAVDDAKLDLSSVEGERFGVVVGSAFGGLQTLETQIQTMNEKGPGSVSPFAVPSLLSNLISGVIALENGAKGPNYVVNSACAASTHALGLAYAHIAHGEADVCLAGGSEAAVTPFGFAGFCSMKAMATKYNDNPSQGSRPFDKDRCGFVMGEGAGMVVLESLEHAQKRGAHIYAEVAGFGQACDAHHITTPHPEGAGLAQAITLALEDAGMAKEDLTYINAHGTSTAYNDKFETLAVKKALGEEVAKKMYLSSTKGSTGHTLGAAGGLEAIATVLAIETKTLPPTINYETPDPDCDLNVVPNKPITLNEITGAASQSAGFGGHDSVVVFKPFK
Sbjct:    1 MRLSTLSVLGPALGCAFLLFDSSLAYLPSYMRGSKGQIYMKEKSQRVVVTGLGPISAVGIGKDAFWKALLEGKSGIDRISGFDPSGLTCQIGAEVKDFDAKPYFKDRKSAVRNDRVTLMGVAASRIAVDDAKLDLSSVEGERFGVVVGSAFGGLQTLETQIQTMNEKGPGSVSPFAVPSLLSNLISGVIALENGAKGPNYVVNSACAASTHALGLAYAHIAHGEADVCLAGGSEAAVTPFGFAGFCSMKAMATKYNDNPSQGSRPFDKDRCGFVMGEGAGMVVLESLEHAQKRGAHIYAEVAGFGQACDAHHITTPHPEGAGLAQAITLALEDAGMAKEDLTYINAHGTSTAYNDKFETLAVKKALGEEVAKKMYLSSTKGSTGHTLGAAGGLEAIATVLAIETKTLPPTINYETPDPDCDLNVVPNKPITLNEITGAASQSAGFGGHDSVVVFKPFK 458          
BLAST of EWM28742.1 vs. NCBI_GenBank
Match: gi|551678107|ref|XP_005841806.1| (hypothetical protein GUITHDRAFT_62997 [Guillardia theta CCMP2712] >gi|428185975|gb|EKX54826.1| hypothetical protein GUITHDRAFT_62997 [Guillardia theta CCMP2712])

HSP 1 Score: 487.263 bits (1253), Expect = 1.038e-167
Identity = 243/411 (59.12%), Postives = 309/411 (75.18%), Query Frame = 0
Query:   45 QRVVVTGLGPISAVGIGKDAFWKALLEGKSGIDRISGFDPSGLTCQIGAEVKDFDAKPYFKDRKSAVRNDRVTLMGVAASRIAVDDAKLDLSSVEGERFGVVVGSAFGGLQTLETQIQTMNEKGPGSVSPFAVPSLLSNLISGVIALENGAKGPNYVVNSACAASTHALGLAYAHIAHGEADVCLAGGSEAAVTPFGFAGFCSMKAMATKYNDNPSQGSRPFDKDRCGFVMGEGAGMVVLESLEHAQKRGAHIYAEVAGFGQACDAHHITTPHPEGAGLAQAITLALEDAGMAKEDLTYINAHGTSTAYNDKFETLAVKKALGEEVAKKMYLSSTKGSTGHTLGAAGGLEAIATVLAIETKTLPPTINYETPDPDCDLNVVPNKPITLNEITGAASQSAGFGGHDSVVVFK 455
            +RVVVTGLG +S +G     FW  L+EGK+ I R+S FDPS  TCQI ++V DF    +F + K+A  NDR T + VAA+R AV DA LDL  V+  R GV+VGSAFGG+ T E Q   ++  GP  VSPF +P+LL N  SG+I +E GA+GPN+ V SACA  +HA+G A   +  G+ADV +AGGSEAAVTP  FAGFC+MKAM T++ND P++GSRPFD DRCGFVMGEGAG++VLE+LEHA+KRGA IYAE+AG+G +CDA+HITTP P GAGLA+AI  AL   G+ KE++ Y+NAHGTSTAYNDKFETLA+K   GEE AKK+ +SSTKG TGHTLGAAGG+EA+  V A+ET  +PPTIN++T DP+CDL+   NK  T+ ++  A S++ GFGGH++ + FK
Sbjct:    7 KRVVVTGLGVMSGLGQELGEFWSNLVEGKTSIARVSHFDPSDYTCQIASQVGDFTPGDFFTNAKTAKSNDRFTHLAVAAARRAVGDAGLDLGKVDKSRMGVMVGSAFGGMATFEEQTLKLSAGGPKKVSPFTIPALLGNTASGIIGIELGAQGPNFGVTSACAVGSHAIGEALNALRRGDADVMVAGGSEAAVTPLSFAGFCAMKAMCTQFNDKPAEGSRPFDADRCGFVMGEGAGVLVLETLEHAEKRGAKIYAELAGYGASCDAYHITTPAPGGAGLARAIEAALRSGGINKEEVGYVNAHGTSTAYNDKFETLALKAVFGEEGAKKLKVSSTKGGTGHTLGAAGGIEAVIAVKALETGVIPPTINFKTADPECDLDYTFNKAATVPDLKVAISENLGFGGHNAALAFK 417          
BLAST of EWM28742.1 vs. NCBI_GenBank
Match: gi|502808083|ref|WP_013043059.1| (beta-ketoacyl-[acyl-carrier-protein] synthase II [Coraliomargarita akajimensis] >gi|293614182|gb|ADE54337.1| 3-oxoacyl-(acyl-carrier-protein) synthase 2 [Coraliomargarita akajimensis DSM 45221])

HSP 1 Score: 478.404 bits (1230), Expect = 3.880e-164
Identity = 228/416 (54.81%), Postives = 306/416 (73.56%), Query Frame = 0
Query:   42 EKSQRVVVTGLGPISAVGIGKDAFWKALLEGKSGIDRISGFDPSGLTCQIGAEVKDFDAKPYFKDRKSAVRNDRVTLMGVAASRIAVDDAKLDLSSVEGERFGVVVGSAFGGLQTLETQIQTMNEKGPGSVSPFAVPSLLSNLISGVIALENGAKGPNYVVNSACAASTHALGLAYAHIAHGEADVCLAGGSEAAVTPFGFAGFCSMKAMATKYNDNPSQGSRPFDKDRCGFVMGEGAGMVVLESLEHAQKRGAHIYAEVAGFGQACDAHHITTPHPEGAGLAQAITLALEDAGMAKEDLTYINAHGTSTAYNDKFETLAVKKALGEEVAKKMYLSSTKGSTGHTLGAAGGLEAIATVLAIETKTLPPTINYETPDPDCDLNVVPNKPITLNEITGAASQSAGFGGHDSVVVFKPF 457
             K  RVVVTG+G IS++G+G D FW +L+ GKSG+D +  FD +    ++G+EV+DF+    F D K A RNDR T   VA++++A++DAK+D + ++ ERFGV+VGS  GG++T++TQ + + EKGP  VSPF +PSL++N+ SGV+A+E GA+GPNY + SAC+  TH +G ++  +  GEAD+ +AGGSEAA+T  G+AGFCSMKAM+T+YNDNP+  SRPFDK R GFVMGEGAG+++LE+LEHAQ RGA IY EV G+   CDA HIT+P PEG  L+ A+   + DAG+  ED+ YINAHGTST YNDKFET A++KA GE  A K+ +SSTK  TGH LGAAGG+E+ A V AI    +PPTINY  PDPDCDL+ +PN      E+  A   ++GFGGH++ ++FK F
Sbjct:    5 RKQSRVVVTGIGTISSLGVGIDPFWDSLIAGKSGLDTVQSFDVTDYPAKVGSEVRDFNIAD-FMDPKEARRNDRYTHFAVASTKLALEDAKVDTTKLDPERFGVLVGSGIGGMETIQTQSRRLYEKGPRKVSPFMIPSLIANIASGVVAIEIGARGPNYGIVSACSTGTHTIGESFRMLRDGEADIMVAGGSEAAITELGYAGFCSMKAMSTQYNDNPTTASRPFDKGRDGFVMGEGAGVLILETLEHAQARGARIYCEVDGYAATCDAFHITSPDPEGKALSAAMKKVVADAGLQVEDVDYINAHGTSTPYNDKFETNAIRKAFGEH-AYKLMVSSTKSMTGHLLGAAGGVESAACVKAIYESKVPPTINYNEPDPDCDLDYIPNTAREA-EVNVALCNNSGFGGHNATLLFKKF 417          
BLAST of EWM28742.1 vs. NCBI_GenBank
Match: gi|1101100090|gb|OIO59060.1| (beta-ketoacyl-[acyl-carrier-protein] synthase II [Verrucomicrobia bacterium CG1_02_43_26])

HSP 1 Score: 476.093 bits (1224), Expect = 2.395e-163
Identity = 238/419 (56.80%), Postives = 311/419 (74.22%), Query Frame = 0
Query:   40 MKEKSQRVVVTGLGPISAVGIGKDAFWKALLEGKSGIDRISGFDPSGLTCQIGAEVKDFDAKPYFKDRKSAVRNDRVTLMGVAASRIAVDDAKLDLSSVEGERFGVVVGSAFGGLQTLETQIQTMNEKGPGSVSPFAVPSLLSNLISGVIALENGAKGPNYVVNSACAASTHALGLAYAHIAHGEADVCLAGGSEAAVTPFGFAGFCSMKAMATKYNDNPSQGSRPFDKDRCGFVMGEGAGMVVLESLEHAQKRGAHIYAEVAGFGQACDAHHITTPHPEGAGLAQAITLALEDAGMAKEDLTYINAHGTSTAYNDKFETLAVKKALGEEVAKKMYLSSTKGSTGHTLGAAGGLEAIATVLAIETKTLPPTINYETPDPDCDLNVVPNKPITLNEITGAASQSAGFGGHDSVVVFKPFK 458
            M EK QR+VVTG+G ++++GIG DA+W +L++GKSGI  ++ FD S   C++ +EV DFD   Y  D K   RNDR T   VAA+++A+ D KLD +SV+ ERFGV+V S  GGL T+E Q +T+ E+GP  VSPF +P L++N+ SGV+A+E GA+GPN+ V SACA  THA+G A   +  G+ DV LAGGSEAA+T  GFAGFC+MKAM+T YNDNP   SRPFD  R GFVMGEGAG+++LE+LEHA+ RGAHIY E+ G+G  CDA+HIT+P PEG GLA+ + LA++   +  +D+ YINAHGTST YNDKFETLA+KK  GEE A+ + +SSTK  TGH LGAAGG+EA A  +AI+T  +PPTINY  PDP+CDLN VPNK +   ++  A S + GFGGH++ +VFK F+
Sbjct:    1 MPEK-QRIVVTGIGVLTSIGIGIDAYWDSLVKGKSGIGSVTQFDASDYPCRVASEVNDFDPAQYM-DPKEVKRNDRYTHFAVAAAKLAMTDGKLDKTSVDPERFGVLVSSGIGGLGTIEKQSRTLFERGPRRVSPFMIPCLIANIASGVVAIEMGARGPNFSVVSACAGGTHAIGEALKFLRSGDVDVMLAGGSEAAITQLGFAGFCAMKAMSTSYNDNPDTSSRPFDATRDGFVMGEGAGVLLLETLEHAEARGAHIYCELVGYGATCDAYHITSPDPEGKGLAKCLQLAMKHGDVDAKDVDYINAHGTSTPYNDKFETLAIKKTFGEEKARDILISSTKSMTGHLLGAAGGIEAAACAMAIQTGDVPPTINYSNPDPECDLNYVPNKSVK-RDVKVAISDNLGFGGHNAALVFKKFE 416          
BLAST of EWM28742.1 vs. NCBI_GenBank
Match: gi|949168617|gb|KRP36832.1| (3-oxoacyl-ACP synthase [Opitutaceae bacterium BACL24 MAG-120322-bin51])

HSP 1 Score: 475.707 bits (1223), Expect = 4.422e-163
Identity = 229/415 (55.18%), Postives = 306/415 (73.73%), Query Frame = 0
Query:   43 KSQRVVVTGLGPISAVGIGKDAFWKALLEGKSGIDRISGFDPSGLTCQIGAEVKDFDAKPYFKDRKSAVRNDRVTLMGVAASRIAVDDAKLDLSSVEGERFGVVVGSAFGGLQTLETQIQTMNEKGPGSVSPFAVPSLLSNLISGVIALENGAKGPNYVVNSACAASTHALGLAYAHIAHGEADVCLAGGSEAAVTPFGFAGFCSMKAMATKYNDNPSQGSRPFDKDRCGFVMGEGAGMVVLESLEHAQKRGAHIYAEVAGFGQACDAHHITTPHPEGAGLAQAITLALEDAGMAKEDLTYINAHGTSTAYNDKFETLAVKKALGEEVAKKMYLSSTKGSTGHTLGAAGGLEAIATVLAIETKTLPPTINYETPDPDCDLNVVPNKPITLNEITGAASQSAGFGGHDSVVVFKPF 457
            K QRVV+TG+G +++ G G D+FW +LL GKSGIDR+  FD +   C++GAE +DF+    F D K A RNDR T   VA+SR+A+ DA +D + ++ +RFGV+VGS  GG+ T + Q + + E GP  VSPF +PSL++N+ SGV+A+E GA+GPNY + SACA+ TH++G ++  +   + DV +AGGSEAAVT  G+AGFCSMKAM+T +ND P++ SRPFDK R GFVMGEGAG++++E+LEHAQ RGA IY E+AG+G  CDA+HIT+P PEG  L+ AI+  ++ AG+  ED+ YINAHGTST YNDKFET A+KKALG+  A K+ +SSTKG TGH LGAAGG+E+    LAI    +PPTINYE PDPDCDL+ VPN  +   E+  A   + GFGGH++ ++FK F
Sbjct:    6 KRQRVVITGIGTVTSYGNGVDSFWDSLLAGKSGIDRVQSFDTTEYACKVGAEARDFNPGD-FMDPKEARRNDRFTQFAVASSRLALADAGIDPTKLDADRFGVLVGSGIGGMLTTQIQSRRLFEMGPRKVSPFMIPSLIANIASGVVAIEVGARGPNYGIVSACASGTHSIGESFRMLRDNDVDVMIAGGSEAAVTELGYAGFCSMKAMSTNFNDEPTRASRPFDKGRDGFVMGEGAGVLIMETLEHAQARGATIYCEIAGYGATCDAYHITSPDPEGKALSVAISKVIKQAGLQPEDVDYINAHGTSTPYNDKFETGAIKKALGDH-AYKIPVSSTKGMTGHLLGAAGGIESAVCALAIRDGKIPPTINYEEPDPDCDLDCVPNT-MREAEVNVAICNNLGFGGHNATLLFKKF 417          
BLAST of EWM28742.1 vs. NCBI_GenBank
Match: gi|1200353116|gb|OUU72784.1| (beta-ketoacyl-[acyl-carrier-protein] synthase II [Coraliomargarita sp. TMED73])

HSP 1 Score: 469.544 bits (1207), Expect = 1.023e-160
Identity = 228/412 (55.34%), Postives = 308/412 (74.76%), Query Frame = 0
Query:   45 QRVVVTGLGPISAVGIGKDAFWKALLEGKSGIDRISGFDPSGLTCQIGAEVKDFDAKPYFKDRKSAVRNDRVTLMGVAASRIAVDDAKLDLSSVEGERFGVVVGSAFGGLQTLETQIQTMNEKGPGSVSPFAVPSLLSNLISGVIALENGAKGPNYVVNSACAASTHALGLAYAHIAHGEADVCLAGGSEAAVTPFGFAGFCSMKAMATKYNDNPSQGSRPFDKDRCGFVMGEGAGMVVLESLEHAQKRGAHIYAEVAGFGQACDAHHITTPHPEGAGLAQAITLALEDAGMAKEDLTYINAHGTSTAYNDKFETLAVKKALGEEVAKKMYLSSTKGSTGHTLGAAGGLEAIATVLAIETKTLPPTINYETPDPDCDLNVVPNKPITLNE--ITGAASQSAGFGGHDSVVVF 454
            +RVVVTG+G I+++GIG + FW  +L GKSGID ++ FD +    ++G+EV+DF+A  Y  D K A RNDR T   VAA+R+A+ DA +D + ++ +R GV+VGS  GG+ T++TQ + + E GP  VSPF +PSL++N+ SGVIA+E GA+GPNY + SAC+ +THA+G ++  +  G+ADV +AGGSEAA+T  G+AGFCSMKAM+T YND+PS+ SRPFD+ R GFVMGEGAG++VLE+LEHA+ RGA IY EV  +   CDA+HIT+P PEG  L++AI   + DAG+   D+ YINAHGTST YNDKFETLA+KKALGE  +K + +SSTK  TGH LGAAGG+E+    +A++   +PPTINYE PDPDCDL+ VPN   T+ E  I+ A   ++GFGGH++ V+F
Sbjct:    8 KRVVVTGIGTITSLGIGIEPFWGNILAGKSGIDSVTSFDVTDYPSKVGSEVRDFNAGDYM-DPKEARRNDRYTHFSVAATRLALSDASMDTTKLDSDRIGVLVGSGIGGMLTIQTQSRRLYEMGPRKVSPFMIPSLIANIASGVIAIEIGARGPNYGLVSACSTATHAIGESFRILRDGDADVMVAGGSEAAITELGYAGFCSMKAMSTSYNDDPSRASRPFDQGRDGFVMGEGAGVLVLETLEHAEARGADIYCEVKSYAATCDAYHITSPDPEGKALSKAIGKTIVDAGLEPSDIDYINAHGTSTPYNDKFETLAIKKALGEHASKTL-ISSTKSMTGHLLGAAGGIESAVCAMALKEGKVPPTINYEDPDPDCDLDYVPN---TMREADISTALCNNSGFGGHNASVLF 414          
BLAST of EWM28742.1 vs. NCBI_GenBank
Match: gi|1119854161|ref|WP_072744251.1| (beta-ketoacyl-[acyl-carrier-protein] synthase II [Sporanaerobacter acetigenes] >gi|1109784822|emb|SHH96535.1| 3-oxoacyl-[acyl-carrier-protein] synthase II [Sporanaerobacter acetigenes DSM 13106])

HSP 1 Score: 466.077 bits (1198), Expect = 1.944e-159
Identity = 224/414 (54.11%), Postives = 301/414 (72.71%), Query Frame = 0
Query:   45 QRVVVTGLGPISAVGIGKDAFWKALLEGKSGIDRISGFDPSGLTCQIGAEVKDFDAKPYFKDRKSAVRNDRVTLMGVAASRIAVDDAKLDLSSVEGERFGVVVGSAFGGLQTLETQIQTMNEKGPGSVSPFAVPSLLSNLISGVIALENGAKGPNYVVNSACAASTHALGLAYAHIAHGEADVCLAGGSEAAVTPFGFAGFCSMKAMATKYNDNPSQGSRPFDKDRCGFVMGEGAGMVVLESLEHAQKRGAHIYAEVAGFGQACDAHHITTPHPEGAGLAQAITLALEDAGMAKEDLTYINAHGTSTAYNDKFETLAVKKALGEEVAKKMYLSSTKGSTGHTLGAAGGLEAIATVLAIETKTLPPTINYETPDPDCDLNVVPNKPITLNEITGAASQSAGFGGHDSVVVFKPFK 458
            +RVV+TGLGPI+++GIGK+ +W +L+EGKSGI  I+ FD  G T +IGAEVK+F  + Y  D+K A R D+     VAA+++A++D+KLDL S++ ER GV++GS  GG++TLE +   + EKGP  VSPF +P ++SN+  G + +  G KGP++ + +ACA+  HA+G ++  I  G +DV + GGSEAA +P   AGFCSMKA++T+ N+ P + SRPFDKDR GFV+GEGAG++VLE LEHA KR AHIY EV G+G   DA+HIT P PE  G A+A+ LALE+A +    + YINAHGTST YNDK ETLA+KK   +  A K+ +SSTK  TGH LGAAGG+EAIATVLA+E   +PPTINYETPDP+CDL+  PNK +   EI  A S S GFGGH++ ++ K ++
Sbjct:    2 RRVVITGLGPITSIGIGKEEYWNSLIEGKSGISYITNFDTEGYTSKIGAEVKEFHPEEYM-DKKEAKRMDKFAQFAVAATKLALEDSKLDLESIDKERVGVILGSGVGGIETLEAEHTKLMEKGPRRVSPFFIPMMISNMGPGQVTMMYGFKGPSFTITTACASGNHAIGESFRMIQKGVSDVIITGGSEAAASPIAVAGFCSMKALSTR-NEEPEKASRPFDKDRDGFVIGEGAGIIVLEELEHALKRNAHIYGEVIGYGATSDAYHITAPDPEAKGAAEAMRLALEEASVDFNQVDYINAHGTSTYYNDKLETLAIKKVFKDH-AYKLAISSTKSMTGHLLGAAGGIEAIATVLAMEEGIIPPTINYETPDPECDLDYTPNKAVK-REINYALSNSLGFGGHNAAILLKKYE 411          
BLAST of EWM28742.1 vs. NCBI_GenBank
Match: gi|524788523|emb|CDE83160.1| (3-oxoacyl-[acyl-carrier-protein] synthase 2 [Coraliomargarita sp. CAG:312])

HSP 1 Score: 464.922 bits (1195), Expect = 5.315e-159
Identity = 232/415 (55.90%), Postives = 291/415 (70.12%), Query Frame = 0
Query:   45 QRVVVTGLGPISAVGIGKDAFWKALLEGKSGIDRISGFDPSGLTCQIGAEVKDFDAKPYFKDRKSAVRNDRVTLMGVAASRIAVDDAKLDLSSVEGERFGVVVGSAFGGLQTLETQIQTMNEKGPGSVSPFAVPSLLSNLISGVIALENGAKGPNYVVNSACAASTHALGLAYAHIAHGEADVCLAGGSEAAVTPFGFAGFCSMKAMATKYNDNPSQGSRPFDKDRCGFVMGEGAGMVVLESLEHAQKRGAHIYAEVAGFGQACDAHHITTPHPEGAGLAQAITLALEDAGMAKEDLTYINAHGTSTAYNDKFETLAVKKALGEEVAKKMYLSSTKGSTGHTLGAAGGLEAIATVLAIETKTLPPTINYETPDPDCDLNVVPN----KPITLNEITGAASQSAGFGGHDSVVVFK 455
            +R+V+TG+G IS  G G   FW AL+ GK+GI ++S FD S L CQ+ AE KDFDA  Y  D K   R+DR T   VAA+++A+ DA L+ S++  ERFGV++GS  GG+ T+ETQ +   E+GP  VSPF +P+LL+N+ SGV+A+  GAKG N+ V SACA  THA+G A  H+  G  DV LAGGSEAAVTP  FAGFC+MKAMAT +ND P + SRPFD DRCGFVMGEGAG++ LE  +HA  RGAHIY E++G+G  CDA+HIT+P  EG GL+Q +   LEDA +  ED+ YINAHGTST YNDKFET A+ K  G   AKK+ +SSTK  TGH LGAAG +EA      IET  +PPTINYE PDPDCDL+ VPN     P+ +     A S + GFGGH+  ++FK
Sbjct:    4 ERIVITGIGVISPFGDGVVPFWDALIHGKNGIGKVSLFDASELNCQVAAECKDFDATKYM-DHKEVKRSDRYTHFAVAAAKLAMQDAGLNESNLIPERFGVLIGSGVGGMDTIETQARAFIERGPRRVSPFMIPNLLANMSSGVVAIALGAKGVNFSVVSACATGTHAIGEALLHLQAGREDVILAGGSEAAVTPLAFAGFCAMKAMATNFNDEPQRASRPFDADRCGFVMGEGAGVIALERYDHAVARGAHIYCEISGYGATCDAYHITSPDIEGRGLSQCLARTLEDANLNPEDVDYINAHGTSTPYNDKFETAAIHKVFGGH-AKKLMVSSTKSMTGHMLGAAGAIEAAVCAKTIETGIVPPTINYEHPDPDCDLDYVPNIARESPVKV-----AISTNLGFGGHNGALLFK 411          
BLAST of EWM28742.1 vs. NCBI_GenBank
Match: gi|1125123906|gb|OLA85061.1| (beta-ketoacyl-[acyl-carrier-protein] synthase II [Verrucomicrobia bacterium CAG:312_58_20])

HSP 1 Score: 462.225 bits (1188), Expect = 7.527e-158
Identity = 229/413 (55.45%), Postives = 290/413 (70.22%), Query Frame = 0
Query:   45 QRVVVTGLGPISAVGIGKDAFWKALLEGKSGIDRISGFDPSGLTCQIGAEVKDFDAKPYFKDRKSAVRNDRVTLMGVAASRIAVDDAKLDLSSVEGERFGVVVGSAFGGLQTLETQIQTMNEKGPGSVSPFAVPSLLSNLISGVIALENGAKGPNYVVNSACAASTHALGLAYAHIAHGEADVCLAGGSEAAVTPFGFAGFCSMKAMATKYNDNPSQGSRPFDKDRCGFVMGEGAGMVVLESLEHAQKRGAHIYAEVAGFGQACDAHHITTPHPEGAGLAQAITLALEDAGMAKEDLTYINAHGTSTAYNDKFETLAVKKALGEEVAKKMYLSSTKGSTGHTLGAAGGLEAIATVLAIETKTLPPTINYETPDPDCDLNVVPNKPITLNEITGAASQSAGFGGHDSVVVFKPF 457
            QR+V+TGLG IS  G G   FW AL  GK+GI  ++ FD + L C++ AE +DFDA  Y  D K A R+DR T   VAA+++A+ DA L    V+ ERFGV++GS  GG+ T+E Q +   E+GP  VSPF +P+LL+N+ SGV+A+E GAKG N+ V SACA  THA+G A  H+  G  D+ LAGGSEAAVTP  FAGFC+MKAMAT +ND P + SRPFD DRCGFVMGEGAG++VLE  EHA  RGA IY E++G+G  CDA+HIT+P  EG GLAQ ++  +EDAG+A E + YINAHGTST YNDKFET A++K  G   A K+ +SSTK  TGH LGAAG +EA      IET  +PPTINYE PDP+CDL+ VPN      ++  A S + GFGGH+  ++F+ F
Sbjct:    4 QRIVITGLGVISPFGDGIAPFWDALSNGKNGIGHVTLFDATELNCRVAAECRDFDATKYM-DPKEAKRSDRYTHFAVAAAKLAMQDANLKEGDVDPERFGVLIGSGVGGMDTIEKQSRAFIERGPRRVSPFMIPNLLANMSSGVVAIEVGAKGVNFSVVSACATGTHAIGEALLHLQMGREDIILAGGSEAAVTPLSFAGFCAMKAMATNFNDEPQRASRPFDADRCGFVMGEGAGVIVLERYEHAVARGAKIYCELSGYGATCDAYHITSPDIEGRGLAQCLSRTMEDAGVAPEQVDYINAHGTSTPYNDKFETAAIRKVFG-AAADKLMVSSTKSMTGHMLGAAGAIEAAVCAKTIETGIVPPTINYEHPDPECDLDYVPNVARKA-DVNVAISTNLGFGGHNGALLFRKF 413          
BLAST of EWM28742.1 vs. NCBI_GenBank
Match: gi|1086266941|emb|SDK44138.1| (3-oxoacyl-[acyl-carrier-protein] synthase II [Natronincola ferrireducens])

HSP 1 Score: 460.685 bits (1184), Expect = 2.817e-157
Identity = 226/413 (54.72%), Postives = 302/413 (73.12%), Query Frame = 0
Query:   45 QRVVVTGLGPISAVGIGKDAFWKALLEGKSGIDRISGFDPSGLTCQIGAEVKDFDAKPYFKDRKSAVRNDRVTLMGVAASRIAVDDAKLDLSSVEGERFGVVVGSAFGGLQTLETQIQTMNEKGPGSVSPFAVPSLLSNLISGVIALENGAKGPNYVVNSACAASTHALGLAYAHIAHGEADVCLAGGSEAAVTPFGFAGFCSMKAMATKYNDNPSQGSRPFDKDRCGFVMGEGAGMVVLESLEHAQKRGAHIYAEVAGFGQACDAHHITTPHPEGAGLAQAITLALEDAGMAKEDLTYINAHGTSTAYNDKFETLAVKKALGEEVAKKMYLSSTKGSTGHTLGAAGGLEAIATVLAIETKTLPPTINYETPDPDCDLNVVPNKPITLNEITGAASQSAGFGGHDSVVVFKPF 457
            +RVVVTGLG ++ VGIGK+ FWKAL  G  G+D I  FD +    +I AEVK F+ + Y  D+K A + DR T   +AAS++AV+DAKLD+ +VE ERFGVV+GS  GG++T E Q   + ++GP  +SPF +P +++N+ SG +++   AKGPN  V +ACA+ST+A+G A+  I  G+AD+ + GG+EA++TP   AGFCSMKAM+T YN++P + SRPFD +R GFVMGEGAG+++LE LEHA KRGA IYAE+ G+G + DA+HITTP PEG G ++A+  AL+DA ++ E + YINAHGTST YNDKFET+A+KK   E  AKK+ +SSTK  TGH LGAAGG+E IA VLAI    +PPTINYETPD +CDL+ VPN      E+  A S S GFGGH++ ++FK +
Sbjct:    3 KRVVVTGLGCVTPVGIGKEFFWKALTSGVCGVDYIEKFDTTDYPTKIAAEVKGFNPEEYM-DKKEAKKMDRFTQFAIAASKLAVEDAKLDIENVEAERFGVVLGSGIGGIETFEEQNNKLMDRGPRRISPFFIPMMITNMGSGQVSMFFNAKGPNSTVVTACASSTNAVGEAFKIIERGDADIMITGGTEASITPLAMAGFCSMKAMST-YNEDPKKASRPFDTNRDGFVMGEGAGILILEDLEHALKRGAPIYAEIVGYGMSSDAYHITTPDPEGKGASRAMENALKDADVSYEKIDYINAHGTSTPYNDKFETMAIKKVFKEH-AKKLCISSTKSMTGHLLGAAGGVEGIACVLAIYNDKVPPTINYETPDEECDLDYVPNVA-KEKEVRYALSNSFGFGGHNATIIFKKY 411          
The following BLAST results are available for this feature:
BLAST of EWM28742.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111165|gb|EWM28742.1|0.000e+0100.003-oxoacyl-(acyl-carrier-protein) synthase 2 [Nanno... [more]
gi|551678107|ref|XP_005841806.1|1.038e-16759.12hypothetical protein GUITHDRAFT_62997 [Guillardia ... [more]
gi|502808083|ref|WP_013043059.1|3.880e-16454.81beta-ketoacyl-[acyl-carrier-protein] synthase II [... [more]
gi|1101100090|gb|OIO59060.1|2.395e-16356.80beta-ketoacyl-[acyl-carrier-protein] synthase II [... [more]
gi|949168617|gb|KRP36832.1|4.422e-16355.183-oxoacyl-ACP synthase [Opitutaceae bacterium BACL... [more]
gi|1200353116|gb|OUU72784.1|1.023e-16055.34beta-ketoacyl-[acyl-carrier-protein] synthase II [... [more]
gi|1119854161|ref|WP_072744251.1|1.944e-15954.11beta-ketoacyl-[acyl-carrier-protein] synthase II [... [more]
gi|524788523|emb|CDE83160.1|5.315e-15955.903-oxoacyl-[acyl-carrier-protein] synthase 2 [Coral... [more]
gi|1125123906|gb|OLA85061.1|7.527e-15855.45beta-ketoacyl-[acyl-carrier-protein] synthase II [... [more]
gi|1086266941|emb|SDK44138.1|2.817e-15754.723-oxoacyl-[acyl-carrier-protein] synthase II [Natr... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1850rna1850Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications