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Properties
| Property Name | Value |
|---|
| Product | redoxin domain protein |
| Orig transcript id | gnl|cribi|Naga_100199g1.9703.mrna |
| Orig protein id | gnl|cribi|Naga_100199g1.9703 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:288226..289486 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1848 ID=rna1848|Name=rna1848|organism=Nannochloropsis gaditana|type=mRNA|length=1809bp
ATGCTTGCGTCTAGCTGGCCTTCAGCGAGTCTTACAAAGTATTGCAAGGC
GCGTCTTTGTTTCGGTCTACTGCACGTATCGGCAAGTGGGCGCATACTCA
GCACTATGGGGATTGTAGACAGGATAAAGGAAATCGAGGAGGAGATGGCC
CGGACCCAGAAAAATAAAGCCACGGAGCACCATCTGGGCGCCCTGAAGGC
CCGTTTGGCGAAGCTTCGGTCCGAGCTCTTGTTGGAAACTGGGAGCAAAG
GACCTGGGGGCGCTGGTACCGGGTTTGAAGTGGCCAGGAGTGGGGACGGG
CGTGTGGCGTTGATCGGCTTCCCCTCCGTGGGGAAGTCCTCCCTTTTGAA
TACCTTGACCGACACGGAATCTCAAGCCGCCGCCTACGAGTTCACCACGC
TCACGTGCATACCGGGCAACATCATCTACAACGACACCAAGATTCAACTG
CTCGACCTGCCGGGAATCATCGAAGGCGCAGCGCACGGGAAAGGGCGTGG
GAAGGAAGTGATTGCCGTGGCCCGCTCCTCGGACCTCGTTCTCATGGTCC
TGGACGGAGGCAAGGAGCAAGTCAACAACCACCGTGCCATCCTCGAGCGG
GAACTCGAGACAGTGGGGCTCCGGCTGAACAAGAAACCGCCCAACATTTA
TTTTAGAAAGAAGAAAGACGGTGGGGTCAAGTTTAACTCGACGGTGCCGC
TCACACAGCTGGGACCCGACCCGGCCTTGACCGTCGGGCGCATCCTCTAT
GAATACAAGATCCACAACTGCGAGATGCTCCTGCGGGAGGACGTCTCCAC
GGACCAAGTCATCGACGTGATCGAGGGCAACCGGAAATATGTCAGGTGCC
TGTACGCCTACAACAAGATCGATACCATCACCATCGAGGACGTGGACAGG
CTGGCTCGGGAGCCTGACGCCATCGTCATCTCCGTCCGCCACAAGCTCAA
CCTGGAGGTGAGCCCGAGGAAGAGGCGGGAAAAGGGGCCTCCGTGGGGGT
CGTCGGCCCCTTTTTTCCCCCATTTCCTCCCTGAGTCATTCGATCTCCCG
TCTTCCTCACGCCTCCCAGCGCCTCCTTGAACGCATGTGGGACTACATGG
GGCTAATCCGCGTCTACACGAAACGGCGAGGCGCCCCCCCCGAGTTCAAA
GAGCCGCTCGTCATGTCCAGCGAGAGGAGAGGAGTGACTGTGGAAGTGGC
TTGCGAGAACATCTCCCGAGGTGAGTACCGCGTCGAGCCTGCGCATACCT
TGGACTGGACTTGGCGCTTCCAGCGACGCCTCCCCAGGCCGTGTGTGTGG
AGACGTCCGGTAGCATTGGGATGTCTCACGCCCTGTCACTTGCCCTCTGT
ACCTGTTCACGTGTTGTCTCTCTTAAGGAAGCCTTGGAATGCATAGTCTC
ACGCCCTGTCACTTGCCCTCTGTACCTGTTCACGTGTCAACAGAGCTTTC
TGAAATATTCAACTACGCCTTGGTCTGGGGTCGTAGCACAAAATATGACC
CGCAACGCTGCGGCTTGCAGCATACATTGGAGGATGAGGACGTTGTACAG
GTGGTGGGTAAGACAGTGACGCAGCAAAAACGCGAGAAGGGGTATTCCAA
GAAGGTCCAGGAGCATTGGGACGCGTTGAAAGCGAAGAAGAAAAAGGCTG
CGCTGCGCTCGTAATGAAACCAGACGACGTTGCCTTTACAGCATGGAAAA
GTCGTAAAGTCGTAACGCGAAAAGTAAATTTCCCGACAATCTAATCACAA
AAAAGAGTGCTGGTAGAGATGTTCCTAGCAACATAGGTGGTATGGCTTGG
AGTGGCGGG back to topprotein sequence of rna1848 >rna1848-protein ID=rna1848-protein|Name=rna1848|organism=Nannochloropsis gaditana|type=polypeptide|length=182bp
MLSVFSRVRRPTNLPSFLALTTRGINTGSKVPTLPLKEVTGDTVSDVSSN
DFFRGKVVLIGLPAAFSPTCSEKHVPGYLAHARNFKQKGVDKIAVLAVND
FFTMKAWAKAQGIGDEISFVADGNGELTNALGLELDLTKAVLGKRCKRFS
MVLEDGIVKSLSIEPDGTGYTVSSAESTLKQV back to topmRNA from alignment at CM002458.1:288226..289486+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1848 ID=rna1848|Name=rna1848|organism=Nannochloropsis gaditana|type=mRNA|length=1261bp|location=Sequence derived from alignment at CM002458.1:288226..289486+ (Nannochloropsis gaditana)
AATACATGACCTGCACCATCCCACTGACAGATACGACTCCGTGTGCATTC
CCACGTCAACCAATATGCTGTCCGTCTTTTCTCGCGTGCGTCGCCccacc
aacctcccctcctttctggcCCTGACAACACGTGGCATCAACACCGGTTC
CAAAGTTCCCACTCTTCCGCTCAAGGAGGTAAGTGTCCAACTATGGTGCT
ACCACTATTTTCACGGGCAGCGCCTGCATCAGGTTTCACGAGAATTGGCT
CTGCAGGGCAAACAACCAGCACGGAATCTGCCGAAGTTTCCCTCAATTAG
CACGACTGCGGACGCACTTACTGACAAGGCAAGTCAAACACGGTTTTTCA
CAGGTGACAGGCGATACTGTTTCTGATGTGTCGAGCAACGACTTTTTCAG
AGGGAAGGTGGTATTAATTGGCCTTCCAGCGGCGTTTTCCCCCACGTGCT
CCGAAAAACATGTTCCAGGATATCTTGCGCATGCGCGGAACTTCAAACAA
AAGGGCGTCGATAAAATTGCGGTCCTGGCAGTGAATGATTTCTTTACTAT
GAAGGCTTGGGCCAAAGCCCAAGGTATAGGCGATGAAATTAGTTTTGTAG
CAGATGGAAACGGGGAGCTAACCAATGCCCTTGGCTTAGAATTAGATTTG
ACGAAAGCTGTCCTAGGGAAGCGATGTAAGCGTTTCTCGATGGTCTTAGA
GGATGGAATTGTAAAATCTTTATCAATAGAGCCGGACGGGACAGGATATA
CCGTTAGCTCTGCAGAAAGTACGCTGAAGCAGGTTTGATGAAGTTTGTCT
GCTTCTTTGCAACGAATGACATGAATGGGACTGAATAGGCCCAAATACTC
CCCCATTCTACGTGATACGAGTTGTCCAGTATATGTGATCAATTTTGAAT
CGTATGATATGACCCTATGTAGGTGTAGCCTGTGCGACTAGTTGACTTCT
ACGGAAGAACGGATGAGAAATGAGTTCTAAATTTTCCTAAGACTTTCTGA
GGTCCACAGCTTTGATTTTTGCTAtggcaacagcaacaagcATTGGGGGG
TCAACCTTGCTTGGAAAATGAGAGCATATTCGTCTAGTGACAGATGTTCT
TTCTCATCTTTTCAAAAACTTTGGCCGCTTTCGACCTACTATATACATAA
ACAAATTAAGAAATCATTCTTGGAAAGATATCAATACGTGATTATTCACT
GTGATTGTACTGTATATCTTTTGGTAAATATGCTGCTACATGTGTGCATG
TCATTCATGAA back to topCoding sequence (CDS) from alignment at CM002458.1:288226..289486+ >rna1848 ID=rna1848|Name=rna1848|organism=Nannochloropsis gaditana|type=CDS|length=1098bp|location=Sequence derived from alignment at CM002458.1:288226..289486+ (Nannochloropsis gaditana)
ATGCTGTCCGTCTTTTCTCGCGTGCGTCGCCccaccaacctcccctcctt
tctggcCCTGACAACACGTGGCATCAACACCGGTTCCAAAGTTCCCACTC
TTCCGCTCAAGGAGGTGACAGGCGATACTGTTTCTGATGTGTCGAGCAAC
GACTTTTTCAGAGGGAAGGTGGTATTAATTGGCCTTCCAGCGGCGTTTTC
CCCCACGTGCTCCGAAAAACATGTTCCAGGATATCTTGCGCATGCGCGGA
ACTTCAAACAAAAGGGCGTCGATAAAATTGCGGTCCTGGCAGTGAATGAT
TTCTTTACTATGAAGGCTTGGGCCAAAGCCCAAGGTATAGGCGATGAAAT
TAGTTTTGTAGCAGATGGAAACGGGGAGCTAACCAATGCCCTTGGCTTAG
AATTAGATTTGACGAAAGCTGTCCTAGGGAAGCGATGTAAGCGTTTCTCG
ATGGTCTTAGAGGATGGAATTGTAAAATCTTTATCAATAGAGCCGGACGG
GACAGGATATACCGTTAGCTCTGCAGAAAGTACGCTGAAGCAGGTTTGAA
TGCTGTCCGTCTTTTCTCGCGTGCGTCGCCccaccaacctcccctccttt
ctggcCCTGACAACACGTGGCATCAACACCGGTTCCAAAGTTCCCACTCT
TCCGCTCAAGGAGGTGACAGGCGATACTGTTTCTGATGTGTCGAGCAACG
ACTTTTTCAGAGGGAAGGTGGTATTAATTGGCCTTCCAGCGGCGTTTTCC
CCCACGTGCTCCGAAAAACATGTTCCAGGATATCTTGCGCATGCGCGGAA
CTTCAAACAAAAGGGCGTCGATAAAATTGCGGTCCTGGCAGTGAATGATT
TCTTTACTATGAAGGCTTGGGCCAAAGCCCAAGGTATAGGCGATGAAATT
AGTTTTGTAGCAGATGGAAACGGGGAGCTAACCAATGCCCTTGGCTTAGA
ATTAGATTTGACGAAAGCTGTCCTAGGGAAGCGATGTAAGCGTTTCTCGA
TGGTCTTAGAGGATGGAATTGTAAAATCTTTATCAATAGAGCCGGACGGG
ACAGGATATACCGTTAGCTCTGCAGAAAGTACGCTGAAGCAGGTTTGA back to top
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