EWM28833.1, cds1843 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28833.1 vs. NCBI_GenBank
Match: gi|585111257|gb|EWM28833.1| (redoxin domain protein [Nannochloropsis gaditana]) HSP 1 Score: 370.933 bits (951), Expect = 6.060e-130 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
Query: 1 MLSVFSRVRRPTNLPSFLALTTRGINTGSKVPTLPLKEVTGDTVSDVSSNDFFRGKVVLIGLPAAFSPTCSEKHVPGYLAHARNFKQKGVDKIAVLAVNDFFTMKAWAKAQGIGDEISFVADGNGELTNALGLELDLTKAVLGKRCKRFSMVLEDGIVKSLSIEPDGTGYTVSSAESTLKQV 182
MLSVFSRVRRPTNLPSFLALTTRGINTGSKVPTLPLKEVTGDTVSDVSSNDFFRGKVVLIGLPAAFSPTCSEKHVPGYLAHARNFKQKGVDKIAVLAVNDFFTMKAWAKAQGIGDEISFVADGNGELTNALGLELDLTKAVLGKRCKRFSMVLEDGIVKSLSIEPDGTGYTVSSAESTLKQV
Sbjct: 1 MLSVFSRVRRPTNLPSFLALTTRGINTGSKVPTLPLKEVTGDTVSDVSSNDFFRGKVVLIGLPAAFSPTCSEKHVPGYLAHARNFKQKGVDKIAVLAVNDFFTMKAWAKAQGIGDEISFVADGNGELTNALGLELDLTKAVLGKRCKRFSMVLEDGIVKSLSIEPDGTGYTVSSAESTLKQV 182
BLAST of EWM28833.1 vs. NCBI_GenBank
Match: gi|553190640|ref|XP_005855233.1| (peroxiredoxin 5, atypical 2-Cys peroxiredoxin [Nannochloropsis gaditana CCMP526] >gi|422293835|gb|EKU21135.1| peroxiredoxin 5, atypical 2-Cys peroxiredoxin [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 367.851 bits (943), Expect = 9.626e-129 Identity = 180/182 (98.90%), Postives = 182/182 (100.00%), Query Frame = 0
Query: 1 MLSVFSRVRRPTNLPSFLALTTRGINTGSKVPTLPLKEVTGDTVSDVSSNDFFRGKVVLIGLPAAFSPTCSEKHVPGYLAHARNFKQKGVDKIAVLAVNDFFTMKAWAKAQGIGDEISFVADGNGELTNALGLELDLTKAVLGKRCKRFSMVLEDGIVKSLSIEPDGTGYTVSSAESTLKQV 182
MLSVFSRVRRP+NLPSFLALTTRGINTGSKVPTLPLKEVTGDTVSDVSSNDFFRGKVVLIGLPAAFSPTCSEKHVPGYLAHAR+FKQKGVDKIAVLAVNDFFTMKAWAKAQGIGDEISFVADGNGELTNALGLELDLTKAVLGKRCKRFSMVLEDGIVKSLSIEPDGTGYTVSSAESTLKQV
Sbjct: 1 MLSVFSRVRRPSNLPSFLALTTRGINTGSKVPTLPLKEVTGDTVSDVSSNDFFRGKVVLIGLPAAFSPTCSEKHVPGYLAHARDFKQKGVDKIAVLAVNDFFTMKAWAKAQGIGDEISFVADGNGELTNALGLELDLTKAVLGKRCKRFSMVLEDGIVKSLSIEPDGTGYTVSSAESTLKQV 182
BLAST of EWM28833.1 vs. NCBI_GenBank
Match: gi|653047031|ref|WP_027298630.1| (peroxiredoxin [Rhodospirillales bacterium URHD0088]) HSP 1 Score: 164.081 bits (414), Expect = 1.528e-48 Identity = 81/157 (51.59%), Postives = 113/157 (71.97%), Query Frame = 0
Query: 25 INTGSKVPTLPLKEVTGDTVSDVSSNDFFRGK-VVLIGLPAAFSPTCSEKHVPGYLAHARNFKQKGVDKIAVLAVNDFFTMKAWAKAQGIGDEISFVADGNGELTNALGLELDLTKAVLGKRCKRFSMVLEDGIVKSLSIEPDGTGYTVSSAESTLK 180
I G KVP++ LK++T + V +VS++DFF+GK VVL +P AF+PTCS KHVPG++ + K KGVD +A L+VND F M AW K Q ++ +ADGNG+ T A+GLELD T LGKR KR++MV+++G+VK+L++E G + VSSAE+ LK
Sbjct: 3 IKVGDKVPSVKLKQMTAEGVKEVSTDDFFKGKKVVLFAVPGAFTPTCSAKHVPGFVQNDAALKAKGVDAVACLSVNDAFVMGAWGKDQKSDGKVVMLADGNGDFTRAVGLELDATANGLGKRSKRYAMVVDNGVVKTLNVEAPGA-FEVSSAEAILK 158
BLAST of EWM28833.1 vs. NCBI_GenBank
Match: gi|1131010386|ref|WP_075771597.1| (peroxiredoxin [Rhodocista sp. MIMtkB3]) HSP 1 Score: 163.696 bits (413), Expect = 2.166e-48 Identity = 79/159 (49.69%), Postives = 109/159 (68.55%), Query Frame = 0
Query: 25 INTGSKVPTLPLKEVTGDTVSDVSSNDFFRGK-VVLIGLPAAFSPTCSEKHVPGYLAHARNFKQKGVDKIAVLAVNDFFTMKAWAKAQGIGDEISFVADGNGELTNALGLELDLTKAVLGKRCKRFSMVLEDGIVKSLSIEPDGTGYTVSSAESTLKQV 182
IN G ++P++ LK +T + ++S++D F+GK VVL +P AF+PTCS KH+PG++ HA K KGV +I +AVND F M+AW K + +I+ + DGNG LT ALGLE+D T LG R +RF++V EDG+VK L +E G + VSSAE LKQV
Sbjct: 3 INVGDRIPSVTLKHLTESGMQEISTDDIFKGKKVVLFSVPGAFTPTCSAKHLPGFVEHAEELKAKGVQEIVCMAVNDPFVMQAWGKQNNVAGKITMLPDGNGALTKALGLEMDGTAYNLGHRGQRFALVAEDGVVKGLYVEKPGA-FEVSSAEYVLKQV 160
BLAST of EWM28833.1 vs. NCBI_GenBank
Match: gi|1088435100|gb|OHC72396.1| (hypothetical protein A3B62_00010 [Rhodospirillales bacterium RIFCSPLOWO2_01_FULL_65_14]) HSP 1 Score: 162.925 bits (411), Expect = 7.646e-48 Identity = 79/160 (49.38%), Postives = 109/160 (68.12%), Query Frame = 0
Query: 25 INTGSKVPTLPLKEVTGDTVSD-VSSNDFFRGKVV-LIGLPAAFSPTCSEKHVPGYLAHARNFKQKGVDKIAVLAVNDFFTMKAWAKAQGIGDEISFVADGNGELTNALGLELDLTKAVLGKRCKRFSMVLEDGIVKSLSIEPDGTGYTVSSAESTLKQV 182
I G K+P++ L V GD + +S++D F K+V L GLP AF+PTCS KH+PGY+ HA ++ G D I L+VND F M AW K QG D+++ VADG+ + T A+GLELDLT LG RC+RFSM++EDG+VK +++EP T VS AE L+++
Sbjct: 3 IKIGDKIPSMTL-HVMGDKGPEAISTDDLFADKIVALFGLPGAFTPTCSAKHLPGYIEHADKLREYGADDIVCLSVNDAFVMHAWGKDQGAKDKVTMVADGSAKFTRAVGLELDLTDRGLGVRCQRFSMIVEDGVVKDIAVEPKPTEAVVSGAEKMLERM 161
BLAST of EWM28833.1 vs. NCBI_GenBank
Match: gi|931392380|gb|KPJ81841.1| (alkyl hydroperoxide reductase [Gammaproteobacteria bacterium SG8_30]) HSP 1 Score: 162.155 bits (409), Expect = 9.144e-48 Identity = 77/159 (48.43%), Postives = 108/159 (67.92%), Query Frame = 0
Query: 25 INTGSKVPTLPLKEVTGDTVSDVSSNDFF-RGKVVLIGLPAAFSPTCSEKHVPGYLAHARNFKQKGVDKIAVLAVNDFFTMKAWAKAQGIGDEISFVADGNGELTNALGLELDLTKAVLGKRCKRFSMVLEDGIVKSLSIEPDGTGYTVSSAESTLKQV 182
I G ++P L +T D S VS+N+ F GKVV+ +P AF+PTCS +H+PG++ H + K KGVD++ +AVND F M AW K+ G+GD I ADGNGE T +LGLELD + +GKR +RF+M++EDG+VK++ +E G + VSSAE L Q+
Sbjct: 3 IKAGDRIPAATLTVMTADGPSKVSTNELFGAGKVVMFSVPGAFTPTCSARHLPGFVDHIGDIKSKGVDRVVCIAVNDVFVMDAWGKSAGVGDRIVMAADGNGEFTRSLGLELDASGFGMGKRGQRFAMIVEDGVVKTVDVEGPGE-FKVSSAEHVLGQL 160
BLAST of EWM28833.1 vs. NCBI_GenBank
Match: gi|1180071307|ref|WP_083591138.1| (peroxiredoxin [Aurantimonas sp. 22II-16-19i] >gi|1178168383|gb|ORE97432.1| peroxiredoxin-like protein [Aurantimonas sp. 22II-16-19i]) HSP 1 Score: 162.155 bits (409), Expect = 9.641e-48 Identity = 82/159 (51.57%), Postives = 108/159 (67.92%), Query Frame = 0
Query: 25 INTGSKVPTLPLKEVTGDTVSDVSSNDFFRGK-VVLIGLPAAFSPTCSEKHVPGYLAHARNFKQKGVDKIAVLAVNDFFTMKAWAKAQGIGDEISFVADGNGELTNALGLELDLTKAVLGKRCKRFSMVLEDGIVKSLSIEPDGTGYTVSSAESTLKQV 182
I G K+P +K T D +D+S+ F GK VVL G+P AF+PTCS H+PG+L H F+QKGVD IAV+AVND F M AW K+ +I F++DGNGE T ALGL++DL+ A LG R KR+SM++EDG+VK L+IE SSAE+ L+Q+
Sbjct: 3 IAVGDKIPNATVKTRTEDGPADLSTESIFSGKTVVLFGVPGAFTPTCSMNHLPGFLTHNDEFRQKGVDTIAVVAVNDIFVMGAWEKSTEASGKILFLSDGNGEFTKALGLDIDLSVAGLGTRSKRYSMLVEDGVVKQLNIEESPGQADKSSAEALLEQM 161
BLAST of EWM28833.1 vs. NCBI_GenBank
Match: gi|1113137057|gb|OJU11965.1| (peroxiredoxin [Alphaproteobacteria bacterium 64-11]) HSP 1 Score: 160.614 bits (405), Expect = 3.348e-47 Identity = 80/159 (50.31%), Postives = 110/159 (69.18%), Query Frame = 0
Query: 25 INTGSKVPTLPLKEVTGDTVSDVSSNDFFRGK-VVLIGLPAAFSPTCSEKHVPGYLAHARNFKQKGVDKIAVLAVNDFFTMKAWAKAQGIGDEISFVADGNGELTNALGLELDLTKAVLGKRCKRFSMVLEDGIVKSLSIEPDGTGYTVSSAESTLKQV 182
I G K+P++ L E+ + V ++DFF+G+ V L LP AF+PTCS KHVPG++A+ + KGVD IA L+VND F M AW K Q G ++ +ADGNGE T+A+GL +D TK +GKR +R+SM++EDG+VKSL+IE G + VSSAE L Q+
Sbjct: 3 IKAGDKIPSVTLMEMQDGKPTPVKTDDFFKGRRVALFALPGAFTPTCSAKHVPGFVANYDALRAKGVDAIACLSVNDAFVMGAWGKDQNSGGKVHMLADGNGEFTDAVGLVMDGTKFGMGKRSQRYSMIVEDGVVKSLNIEEPGA-FEVSSAEHMLGQL 160
BLAST of EWM28833.1 vs. NCBI_GenBank
Match: gi|1088278631|gb|OHB33746.1| (alkyl hydroperoxide reductase [Phenylobacterium sp. RIFCSPHIGHO2_01_FULL_70_10]) HSP 1 Score: 160.614 bits (405), Expect = 3.422e-47 Identity = 78/159 (49.06%), Postives = 112/159 (70.44%), Query Frame = 0
Query: 25 INTGSKVPTLPLKEVTGDTVSDVSSNDFFRGK-VVLIGLPAAFSPTCSEKHVPGYLAHARNFKQKGVDKIAVLAVNDFFTMKAWAKAQGIGDEISFVADGNGELTNALGLELDLTKAVLGKRCKRFSMVLEDGIVKSLSIEPDGTGYTVSSAESTLKQV 182
I G K+P++ L + T D VSS+DFF GK V L +P AF+PTCS +H+PG++ A K KGVD IA L+VND F MKAW +AQ +G++I +ADG+G+ T A+GLE+D K +G+R +R+SM++EDG+VKSL++E G + VSSA+ + Q+
Sbjct: 3 IKVGDKLPSVTLTQATADGPKPVSSDDFFAGKTVALFAVPGAFTPTCSARHLPGFVDKADEIKGKGVDVIACLSVNDAFVMKAWGEAQSVGEDIVMLADGSGDFTKAVGLEMDARKFGMGERSQRYSMIVEDGVVKSLNVEEPGE-FKVSSADHLVAQL 160
BLAST of EWM28833.1 vs. NCBI_GenBank
Match: gi|636823906|ref|WP_024349997.1| (peroxiredoxin [Aurantimonas coralicida]) HSP 1 Score: 159.844 bits (403), Expect = 7.411e-47 Identity = 80/159 (50.31%), Postives = 108/159 (67.92%), Query Frame = 0
Query: 25 INTGSKVPTLPLKEVTGDTVSDVSSNDFFRGK-VVLIGLPAAFSPTCSEKHVPGYLAHARNFKQKGVDKIAVLAVNDFFTMKAWAKAQGIGDEISFVADGNGELTNALGLELDLTKAVLGKRCKRFSMVLEDGIVKSLSIEPDGTGYTVSSAESTLKQV 182
I G K+P LK T D +D+S+++ F GK VVL +P AF+PTCS H+PG+L H + KGVD IAV+AVND F M AW KA +I F++DGNGE T ALGL++DL+ A LG R KR+SM++EDG+VKSL++E S+AE+ L+Q+
Sbjct: 3 IGIGDKLPNATLKTKTSDGPADLSTDEIFAGKKVVLFAVPGAFTPTCSMNHLPGFLTHNDEIRAKGVDTIAVVAVNDIFVMGAWEKANDAAGKILFLSDGNGEFTKALGLDIDLSVAGLGLRSKRYSMIVEDGVVKSLNVEESPGQAERSTAEAVLEQL 161 The following BLAST results are available for this feature:
BLAST of EWM28833.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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