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Properties
| Property Name | Value |
|---|
| Product | iron-sulfur protein |
| Orig transcript id | gnl|cribi|Naga_100199g3.9709.mrna |
| Orig protein id | gnl|cribi|Naga_100199g3.9709 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:283192..284467 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1845 ID=rna1845|Name=rna1845|organism=Nannochloropsis gaditana|type=mRNA|length=1518bp
CGGCCAGAGATACTGACAGCGCATACTTACGTTGGTCTAGCGTGGATACA
GCGATGATCATGTCAGGGCGCAGAATTCTCATTAACATGCGATCAATTGT
CTTGATTCGAACAGGTCACATCCCTCAGCGAATACTCGGGTGCAGCCGAT
AAGTCATCATGGCGGAAGAGAAGTATCTGATTTTCGGCAAGAATGGATGG
ATCGGAGGGAAGCTTATTGAGCTTCTGCAGGCGCAAGGCAAGACAGTGGT
GTTGGCTCAGACACGACTGGAGAATCGGGAGTCGTTGTTTGCAGAGCTGG
ACGCTGTGAAGCCGACACACGTCTTGGATGCAGCAGGCGTGACGGGTCGC
CCCAACATTGATTGGTGTGAGACTCACCAGGTGGAGACGATCCGCACGAA
CGTTATTGGGACGTTGAATCTGGCGGAGGCGTGTCACTTGAAAGGGATCC
ACATGACGTTGTACGCGACGGGATGCATCTTCGAGTACGACGAGAAGCAC
CCTATAGGGGGGCCCGGCTTCACGGAGGAGGACTCGCCCAACTTCTTCGG
GTCGTTCTACAGCAAGACCAAGGCATACATGGAAGACATGCTGAAGAGCT
ACAATAACGTGTGCATCCTCCGTGTCCGTATGCCCATTTCCGACGATTTG
AACTCCAGGAATTTTGTCACCAAGATCGTCAAGTACGACAAGGTCGTGAA
CGTGCCGAACTCGATGACGGTCTTGACGGACCTCCTCCCCATCTCCTTGC
TCATGGCCGCGCGGAAGTTGACGGGCATCTACAACTTCACCAATCCCGGC
GCCATTTCCCACAACCAAATTCTCGCCTTGTACAAGAAGCACGTGGACCC
CTCCTACACGTGGGAGAACTTCACGATCGATGAGCAGAACAAGATCTTGG
CAGCCAAGCGATCCAACAACGAGCTGGATACCACCAAATTCTGCGCCGCA
TTGCCGGACGTGCACATTCCCGACATCCACGAGGCCTGCGAGAAGGTCTT
CCAGCGCATGAAGGTCAACCTGGAAGCGGAGGGTATCTGGCCCGACAAGC
TCCCGAAGCGCACCAACCGCCTTGCGCCCCCGTCCTCTTGAACTCGTATT
CTATGTTCTTGAAGTTGTATCTTCACCTCCAAGCTTCGTGCTTCCTTCCA
CGATCTTGTGGGGTTAAATGCCAGAGAGCAGAATTGAATAATCGGTGCAA
TCGTCGCGCTTCGACGAGCTGTATGTACGCTAGGCGGGAGATGTTAACTA
CAACGGGATGGGAGGCACAGGCCGGGGGGGGGGGCGGAGGTGGAGTGTGT
GATAGAGCGGTCGAGACTATGACTCAGACATGAAAAGGCACGAATGGGAT
CGGAGAAAGTCCAAGTTAACAGCTTGCGATACTTAGTACGTCAATGGTTG
AAAGAAAAAGACAGCCCCGAAAAAGGAAAATCAGCTTGATCACGGGGCGC
GGGGGCCAAAAAGACGAGGCATTTTCATTTTAAAACCCATGCCAGGGCCC
GATATTGGGGGCGTCCCG back to topprotein sequence of rna1845 >rna1845-protein ID=rna1845-protein|Name=rna1845|organism=Nannochloropsis gaditana|type=polypeptide|length=265bp
MSRTHVASKLLRGVALTSCLRGGGARSSPFLSASSVAPGSAFVRGRTSLS
RIATIREGRIPQEGSKAHQMQHRKARASTMAAATTSKLSSMEVEHGQVHE
HPSQVPIPPASASNAPTSIDSSSRDKSKSEVPPTIPPSPPPAESFPRPSS
PPRRPRAAPLQLTERAVSRIKELLASKGPSVIGVRLGTKRRGCNGLSYTM
NYAETRPKFDEEVQVGGVTVFVEPSALMHVVGTEMDYEETELSREFTFNN
PNAKGQCGCGESFNV back to topmRNA from alignment at CM002458.1:283192..284467- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1845 ID=rna1845|Name=rna1845|organism=Nannochloropsis gaditana|type=mRNA|length=1276bp|location=Sequence derived from alignment at CM002458.1:283192..284467- (Nannochloropsis gaditana)
TGCCGTTGTACGAACACAGGTACCATTGTCAGTGCTGTCCTAGCCAGCAG
ACGGCCCAGGGTGGAGCTTGGGCTTGAGAAGCACGAGATCCTTGTTGCCT
TCTTGGGAAAGTCGAAGTAGCTCGAATAACCTCACACGCAGTGAGTAAGC
CGCTCCACCGTCATGTCCAGAACCCACGTTGCTTCGAAATTGCTACGAGG
GGTAGCTCTGACATCGTGTCTCAGAGGAGGAGGAGCAAGATCCTCCCCAT
TCCTTTCCGCCTCGTCAGTCGCCCCAGGGAGTGCTTTTGTTCGCGGGCGT
ACTTCCCTTTCGAGAATAGCCACGATCCGAGAGGGAAGAATTCCACAAGA
GGGGAGCAAAGCGCACCAAATGCAACATAGGAAGGCGCGGGCTTCCACCA
TGGCAGCAGCGACGACTTCGAAGCTCAGCTCGATGGAGGTAGAGCACGGG
CAGGTTCATGAGCACCCATCCCAGGTGCCAATCCCTCCAGCCTCTGCATC
GAACGCACCCACGAGCATTGACTCCTCTTCTCGAGACAAGAGCAAGAGTG
AAGTGCCGCCCACCATCCCTCCGTCTCCACCGCCCGCCGAGTCCTTCCCC
CGTCCCTCCTCCCCCCCTCGGCGTCCCCGGGCCGCCCCTCTTCAACTGAC
TGAGCGGGCCGTGTCCCGCATTAAAGAGCTGCTTGCATCGAAAGGTCCGT
CCGTCATAGGCGTCCGACTTGGGACGAAGCGCCGTGGGTGCAATGGGTTG
TCGTACACGATGAATTACGCGGAGACGCGACCGAAGTTTGATGAGGAAGT
GCAGGTGGGCGGAGTGACGGTTTTTGTCGAGCCCTCCGCCTTGATGCACG
TGGTGGGCACCGAGATGGACTACGAGGAGACGGAGCTCTCCAGGGAGTTC
ACCTTCAACAACCCCAATGCCAAGGGCCAGTGTGGCTGCGGGGAGAGTTT
CAATGTGTAGCACGGGGGGGAGGGAGGAGGAAAAGACAGGCTTTGTACAA
AGATGACGGACAAGGAGTGGACGTGCTTGCCAGGAGCATTCTTCACTTGT
GAGTAGATTGCAAATTTTGAAGGGAGGTAAGGGGGGAGGAAGGGATGGAG
GGAAGAGGGAGAGGGGGCGCGTTTTGTGGGAGCTCTCTGGCTGGGAGATC
GTATTTGGATGATTCAATCGACGATTTAAGGCACAAAAAATGACTGAACG
AGGTGGACACGGGACGCCCCCAATATCGGGCCCTGGCATGGGTTTTAAAA
TGAAAATGCCTCGTCTTTTTGGCCCC back to topCoding sequence (CDS) from alignment at CM002458.1:283192..284467- >rna1845 ID=rna1845|Name=rna1845|organism=Nannochloropsis gaditana|type=CDS|length=798bp|location=Sequence derived from alignment at CM002458.1:283192..284467- (Nannochloropsis gaditana)
ATGTCCAGAACCCACGTTGCTTCGAAATTGCTACGAGGGGTAGCTCTGAC
ATCGTGTCTCAGAGGAGGAGGAGCAAGATCCTCCCCATTCCTTTCCGCCT
CGTCAGTCGCCCCAGGGAGTGCTTTTGTTCGCGGGCGTACTTCCCTTTCG
AGAATAGCCACGATCCGAGAGGGAAGAATTCCACAAGAGGGGAGCAAAGC
GCACCAAATGCAACATAGGAAGGCGCGGGCTTCCACCATGGCAGCAGCGA
CGACTTCGAAGCTCAGCTCGATGGAGGTAGAGCACGGGCAGGTTCATGAG
CACCCATCCCAGGTGCCAATCCCTCCAGCCTCTGCATCGAACGCACCCAC
GAGCATTGACTCCTCTTCTCGAGACAAGAGCAAGAGTGAAGTGCCGCCCA
CCATCCCTCCGTCTCCACCGCCCGCCGAGTCCTTCCCCCGTCCCTCCTCC
CCCCCTCGGCGTCCCCGGGCCGCCCCTCTTCAACTGACTGAGCGGGCCGT
GTCCCGCATTAAAGAGCTGCTTGCATCGAAAGGTCCGTCCGTCATAGGCG
TCCGACTTGGGACGAAGCGCCGTGGGTGCAATGGGTTGTCGTACACGATG
AATTACGCGGAGACGCGACCGAAGTTTGATGAGGAAGTGCAGGTGGGCGG
AGTGACGGTTTTTGTCGAGCCCTCCGCCTTGATGCACGTGGTGGGCACCG
AGATGGACTACGAGGAGACGGAGCTCTCCAGGGAGTTCACCTTCAACAAC
CCCAATGCCAAGGGCCAGTGTGGCTGCGGGGAGAGTTTCAATGTGTAG back to top
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