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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100013g33.9805.mrna |
| Orig protein id | gnl|cribi|Naga_100013g33.9805 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:481273..483748 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna184 ID=rna184|Name=rna184|organism=Nannochloropsis gaditana|type=mRNA|length=1935bp
ATGCACATAGCGTCCCTAGGGCCATTTGCAGGCAGTCTTGAATCGACGCC
CCGGACAATGGATGTCACAAAGGCCACATTTGCCGATGTTTTGCCTGAAA
TAGAGGCAGCATTGCAGAACTGTGAGTTTGTGGCTGTCGATTTTGAAATG
TCAGGCATTAATCTTGCAGGGCAGCCGCGCATCACCTACGCTGACACCAT
GCAAGAAAGGTACGCACAACAGCGCGTGGTCGCCTCGCGCTTCAAGATCA
TCCAAATGGGAATAAGCATTGTTAGTAAAGTAGAAAAGACAGGGAGCAGC
GGTAATTCTGCGTCGCATACTTTAGTGGCCTGTCCGTATAATTTCTACAC
CTTTGCTGCGGATGGCGACGACGTGATATTGAGCCTTTCAGCAATACATT
TCCTGAAAGATCACGGGATGGATTTTAACAAATGGATCCAGGAGGGCGTA
TCATACACTAACGCCGCGCGGGAGGAGGAGCTGATTAAAAGACTGGACTG
TGAACGTGAAAGGGACGAGGAGGAAATAAAGAAACCGGAAGGCGGTGCCC
CGGGGAAAACGCAGATGAACCTGACTAAACCGGCCGATGTTGAGTTTATG
AAAAAGCAGATGGAGGTTGTGAAAGCATGGCGGGAGGAAAGCGAGATATT
AGGTGGTGCAGAAAGTTTGTCGGAGGAGGAGAAAAGCGAAGCGGCGCGAC
GACGCAAGGAGTTGACGCTGGCTCGCACGAACGCTTTCATGAGGCGTGCA
CTTTTTGAAGCAATCGAGATTTACTACCCTGATCTGATCACAGAATCACG
GAACAATCAAGTTATCGTCCTCCGCTTGAGCGCCGCGGAAAAAGAAGAGA
GGATGGCAGCGCGGGAGGCGGCCAGACAGTCGCGGAGGCTCAGCACAGTG
GGGATGCGATTGGTCTTCAAGGCCATGTCTGCCTGCGCCCGTCCCATCGT
CGTTCACAATGGCTTCTTTGATCTGCTTTTCATGATGGCAGCTTTCCACA
AACCATTGCCCGAGAAGCTGGTGGACTTCAAGGCCGACGTGCGGGCCTGC
TTCCCAGCCGGCGTCTACGACACCCGCCTCATTTCCACGAGGGAGGACCT
ATTGGGCAAGTCCCTGGGCGACAAGGGACTCGAGGGCCTGTGCCAAGCTC
TGGTCCAAGAAACGCCGGAGGGAGGTGTGGACCTGGTGTTGGCGGAGGGG
TTCGAAAAATACGGGGGGAGCGAGCGGCAGGCGTTCGCGCACGAAGCGGG
CTACGACGCCTACTTGACCGGAGCCGTCTTTGCGCGCATGCAGGTCTTGT
TGGGAGACGCGGGCCTTGAAAAGCTGAAGATGATGGTGTTCTCCTTCCGG
AGCATGTTCGTGACGAACCTGGGCGAAGACAGGGACTGGCCTGTGTACGG
GCAGCAAGGGGAGCTGGTCTTCCATTTGGGGTGGGAAAAGGAGGCCGGCA
AGGACCTGAAGGACGCGGACCTGATGAAGTTGTTCGGGGACCGCTCGGCG
GACACCTGGATCCTCTGGATCGACGACTGCGGGGCCTTTGCCGTGCTGCA
GGGGAAGGAAGGGGGGGAGGCGCTGAGGGGGGAGGACGTGCTTAAGGCTC
TGCCGGAAACCTCCACCGTTGTCCGGGTAACCACCTTCAAGGACTGGTGT
GCCGCGAAAGAGGCAGAGACGGAGGCTGCAGGGGAGCCTGTGGAGGTAGG
GAAGGATGGATGGGAGAAGGTGAGGAAACACGAAAAGAGACTTGTGATTT
TGGATCAGCTACCCAGAAGCAACTGGAGTGCTACGATATCTTGCGCGAGC
TGTAAGAATTGCGTGATTTTGATGATTTTGTTAGGGTTAACCCTAACCCT
AACTGATGATTTTGTTAGAGTCGTTGGATGGACTAGTCGCCAGATTATGT
TTCAAAATCAAAGCCATCATGATTTCGATAATTAA back to topprotein sequence of rna184 >rna184-protein ID=rna184-protein|Name=rna184|organism=Nannochloropsis gaditana|type=polypeptide|length=231bp
MAARQLFLLALLPAVALSFMGHPRVSRGSVRMMSDLMDKPKISPAVSTPP
AGGEPKSTALVPVNPQTIETSAAIVGTSAGIVFLGPVLGIVLGLLTNYAA
KTDNDVGEAARGVGKTALEVFNYIVKINSKYQIGTKVSNSASSLVSKLKE
NDGEDSVVAKLEETFESTKTKLSDLDQEYDLVSKAKSAVGLTVDFSNSAI
DKALELNEKYSIVDKTTDAVKKAVNKAKESI back to topmRNA from alignment at CM002455.1:481273..483748- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna184 ID=rna184|Name=rna184|organism=Nannochloropsis gaditana|type=mRNA|length=2476bp|location=Sequence derived from alignment at CM002455.1:481273..483748- (Nannochloropsis gaditana)
TGGCCTCTTTTCTCTTGTGGCCTTGCCTCCTCTCTTCCACCTCCTGTGTG
CGTTATGGCACCGTGTCCTTTTTCTCTTTAATTCACTACCACCCACCTCG
AAAGCGATGCGTCCTCACCAACAATTACTCGGGGCACTCCCGTGCAAGAC
GCCCTCCCCGCATTGCGGGAAGCTCTCCGTGGTTGCTCGCACAAAATCCT
CACCCTTTCTCTTGCTTCCTTTCCCATAAAATGGGCACCACCAGTCGTCT
CCGCCTCTCATAGCAATGGCTGCCCGACAACTCTTTCTTCTAGCTCTTTT
ACCAGCAGTTGCCTTGTCTTTCATGGGTAAGTCGATGGCAGGCGAGCAGA
AGGAAAAGCGGAACGGGGTTCCAGGCGTGTGCCCGACGGTTCAGATTACC
ATGGTTCTCACCTCGCTCCCTTTCAATGCCATTGAGTACACTAATTATAA
ACACCTTTCTCACCCCCATTCGATGGATCTTTGCAGGCCATCCCCGCGTG
TCAAGGGGGTAAGTTAAGGGAGAGGGAGAAGGAGGCACGAGTGGATAGGT
GTATCGAAAGTTGATCTATGTGGGACCGTTGGAATGAGTACAGGCAGTGG
AGGTTTTTTCGTAGAGAAAACGTGATATTGATGATTAAAGTGTCTGTGAA
TATGAATTTTGGGCTTGCCGTGTTCATGGTTGAGTCCTTTTCGGCAGCAG
AAAAAGACTCGACTCGCTTCTGACTTCCTCTCCCCACATGTTCCTCCTGG
TGTTTTGCCTGACCCCAGGAGCGTTCGCATGATGTCGGACCTGATGGATA
AGCCCAAGATCAGCCCCGCCGTGAGCACGCCCCCGGCGGGAGGGGAGCCG
AAAAGCACTGCCTTGGTGCCGGTGAACCCGCAGACCATCGAGACAAGCGC
CGCCATCGTCGGTACCTCCGCGGGCATCGTCTTCCTGGGGCCTGTGCTGG
GCATCGTCCTTGGCCTTCTCACCAACTACGCGGCCAAGACTGACAACGAT
GTGGGGGAGGCGGCCCGTGGGGTGGGGAAGACTGCTCTGGAGGTCTTCAA
TTACATCGTGAAGATCAACTCCAAGTACCAAATCGGAACCAAGGTCTCGA
ATTCCGCCTCCTCCTTAGTCTCCAAGCTGAAGGAGAACGATGGCGAGGAC
TCCGTGGTGGCCAAGCTGGAGGAGACTTTTGAGTCAACCAAGACGAAGCT
CTCGGACCTGGACCAAGAGTACGACCTGGTGAGCAAGGCTAAGAGCGCGG
TGGGGCTGACGGTGGACTTCTCAAACTCAGCGATCGACAAGGCTCTGGAG
TTGAACGAGAAGTACTCCATCGTGGACAAGACGACGGACGCGGTGAAGAA
GGCGGTGAACAAGGCCAAGGAGTCCATCTGAGGGGGGCGGGTCGGAGGGG
ACTGAGGGAAGCAGGAGTGCGCGGGGGGAGTGGCCTGGCGTAGCCGTGCG
ACAGAAAGGGGAGCCCGGAAGGAGCTATTGGGCTGAGGTACGCACGGTAT
GGATTGGGAAGTCTCGGAGCGACGGACGCGGTCGGATGTGAGGGAGAGCA
AGGGGGCTTGAGACAGAGTGCACGTATCTTTGAGGCCCAATCCGGGATAG
GGTTAGGATTAGGGAAGTCCTTGCATTGCTTTCCTTGCCACAACCTCACT
GTAGTTTCCTGATGTGTTTTCCAGATGTCACAGTCGAAGGTGGACTGCGG
GCGAACCCTCAAATTATTAGTTAGGATAGCTGCGTCGGTGCTCACGTTTG
GCTGCTCTCGCCTTGCCTCCAGTTTTCACTCAGCCCATCCAGAGATATGC
GTGTGATGTTGTCCGCCTTAAACGTACGTGATGTCCCATTTAATTTATTT
TATTCTATCCCTCCCCCCCCCCCCCCCTCTCCTTGTTCCTTTCTCGATTC
CCATCCTCTCCTATGTTTGCTTCGGCAGGAATGTCTCTAGATCGTTGATG
GTTTCTATGGAGGAAGCTTTGCGTGATTTTACCCTTGAGGACGAGGGGAA
ACGAATAGGAGGGCCCTTAGCTCCCGTCGGTCATGAGGGGACCGGCCTAT
TTTGTGAGGGGGACATCCTGGGGGAGATGCTCGTGGACATGAGCAAGAAA
GTTGAGGTGTCGAAGAATCGGGTGGGCTATCACGCATGAATCGATCGAGA
AAGAGACTGGGCAGCGAGCAAGCATTCGGTGTATTGATCTTTCTTTGAAC
AAAACCGGGAACAAGAAAAAAGAAAATTAACAGGGCGCCTTCTTAATTAT
CGAAATCATGATGGCTTTGATTTTGAAACATAATCTGGCGACTAGTCCAT
CCAACGACTCTAACAAAATCATCAGTTAGGGTTAGGGTTAACCCTAACAA
AATCATCAAAATCACGCAATTCTTACAGCTCGCGCAAGATATCGTAGCAC
TCCAGTTGCTTCTGGGTAGCTGATCCAAAATCACAAGTCTCTTTTCGTGT
TTCCTCACTTAGTCGCTGCGGCCTGT back to topCoding sequence (CDS) from alignment at CM002455.1:481273..483748- >rna184 ID=rna184|Name=rna184|organism=Nannochloropsis gaditana|type=CDS|length=2088bp|location=Sequence derived from alignment at CM002455.1:481273..483748- (Nannochloropsis gaditana)
GAGCGTTCGCATGATGTCGGACCTGATGGATAAGCCCAAGATCAGCCCCG
CCGTGAGCACGCCCCCGGCGGGAGGGGAGCCGAAAAGCACTGCCTTGGTG
CCGGTGAACCCGCAGACCATCGAGACAAGCGCCGCCATCGTCGGTACCTC
CGCGGGCATCGTCTTCCTGGGGCCTGTGCTGGGCATCGTCCTTGGCCTTC
TCACCAACTACGCGGCCAAGACTGACAACGATGTGGGGGAGGCGGCCCGT
GGGGTGGGGAAGACTGCTCTGGAGGTCTTCAATTACATCGTGAAGATCAA
CTCCAAGTACCAAATCGGAACCAAGGTCTCGAATTCCGCCTCCTCCTTAG
TCTCCAAGCTGAAGGAGAACGATGGCGAGGACTCCGTGGTGGCCAAGCTG
GAGGAGACTTTTGAGTCAACCAAGACGAAGCTCTCGGACCTGGACCAAGA
GTACGACCTGGTGAGCAAGGCTAAGAGCGCGGTGGGGCTGACGGTGGACT
TCTCAAACTCAGCGATCGACAAGGCTCTGGAGTTGAACGAGAAGTACTCC
ATCGTGGACAAGACGACGGACGCGGTGAAGAAGGCGGTGAACAAGGCCAA
GGAGTCCATCTGAGCCATCCCCGCGTGTCAAGGGGATGGCTGCCCGACAA
CTCTTTCTTCTAGCTCTTTTACCAGCAGTTGCCTTGTCTTTCATGGGAGC
GTTCGCATGATGTCGGACCTGATGGATAAGCCCAAGATCAGCCCCGCCGT
GAGCACGCCCCCGGCGGGAGGGGAGCCGAAAAGCACTGCCTTGGTGCCGG
TGAACCCGCAGACCATCGAGACAAGCGCCGCCATCGTCGGTACCTCCGCG
GGCATCGTCTTCCTGGGGCCTGTGCTGGGCATCGTCCTTGGCCTTCTCAC
CAACTACGCGGCCAAGACTGACAACGATGTGGGGGAGGCGGCCCGTGGGG
TGGGGAAGACTGCTCTGGAGGTCTTCAATTACATCGTGAAGATCAACTCC
AAGTACCAAATCGGAACCAAGGTCTCGAATTCCGCCTCCTCCTTAGTCTC
CAAGCTGAAGGAGAACGATGGCGAGGACTCCGTGGTGGCCAAGCTGGAGG
AGACTTTTGAGTCAACCAAGACGAAGCTCTCGGACCTGGACCAAGAGTAC
GACCTGGTGAGCAAGGCTAAGAGCGCGGTGGGGCTGACGGTGGACTTCTC
AAACTCAGCGATCGACAAGGCTCTGGAGTTGAACGAGAAGTACTCCATCG
TGGACAAGACGACGGACGCGGTGAAGAAGGCGGTGAACAAGGCCAAGGAG
TCCATCTGAGCCATCCCCGCGTGTCAAGGGGATGGCTGCCCGACAACTCT
TTCTTCTAGCTCTTTTACCAGCAGTTGCCTTGTCTTTCATGGGAGCGTTC
GCATGATGTCGGACCTGATGGATAAGCCCAAGATCAGCCCCGCCGTGAGC
ACGCCCCCGGCGGGAGGGGAGCCGAAAAGCACTGCCTTGGTGCCGGTGAA
CCCGCAGACCATCGAGACAAGCGCCGCCATCGTCGGTACCTCCGCGGGCA
TCGTCTTCCTGGGGCCTGTGCTGGGCATCGTCCTTGGCCTTCTCACCAAC
TACGCGGCCAAGACTGACAACGATGTGGGGGAGGCGGCCCGTGGGGTGGG
GAAGACTGCTCTGGAGGTCTTCAATTACATCGTGAAGATCAACTCCAAGT
ACCAAATCGGAACCAAGGTCTCGAATTCCGCCTCCTCCTTAGTCTCCAAG
CTGAAGGAGAACGATGGCGAGGACTCCGTGGTGGCCAAGCTGGAGGAGAC
TTTTGAGTCAACCAAGACGAAGCTCTCGGACCTGGACCAAGAGTACGACC
TGGTGAGCAAGGCTAAGAGCGCGGTGGGGCTGACGGTGGACTTCTCAAAC
TCAGCGATCGACAAGGCTCTGGAGTTGAACGAGAAGTACTCCATCGTGGA
CAAGACGACGGACGCGGTGAAGAAGGCGGTGAACAAGGCCAAGGAGTCCA
TCTGAGCCATCCCCGCGTGTCAAGGGGATGGCTGCCCGACAACTCTTTCT
TCTAGCTCTTTTACCAGCAGTTGCCTTGTCTTTCATGG back to top
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