EWM30517.1, cds184 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30517.1 vs. NCBI_GenBank
Match: gi|585113181|gb|EWM30517.1| (hypothetical protein Naga_100013g33 [Nannochloropsis gaditana]) HSP 1 Score: 459.529 bits (1181), Expect = 2.108e-163 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0
Query: 1 MAARQLFLLALLPAVALSFMGHPRVSRGSVRMMSDLMDKPKISPAVSTPPAGGEPKSTALVPVNPQTIETSAAIVGTSAGIVFLGPVLGIVLGLLTNYAAKTDNDVGEAARGVGKTALEVFNYIVKINSKYQIGTKVSNSASSLVSKLKENDGEDSVVAKLEETFESTKTKLSDLDQEYDLVSKAKSAVGLTVDFSNSAIDKALELNEKYSIVDKTTDAVKKAVNKAKESI 231
MAARQLFLLALLPAVALSFMGHPRVSRGSVRMMSDLMDKPKISPAVSTPPAGGEPKSTALVPVNPQTIETSAAIVGTSAGIVFLGPVLGIVLGLLTNYAAKTDNDVGEAARGVGKTALEVFNYIVKINSKYQIGTKVSNSASSLVSKLKENDGEDSVVAKLEETFESTKTKLSDLDQEYDLVSKAKSAVGLTVDFSNSAIDKALELNEKYSIVDKTTDAVKKAVNKAKESI
Sbjct: 1 MAARQLFLLALLPAVALSFMGHPRVSRGSVRMMSDLMDKPKISPAVSTPPAGGEPKSTALVPVNPQTIETSAAIVGTSAGIVFLGPVLGIVLGLLTNYAAKTDNDVGEAARGVGKTALEVFNYIVKINSKYQIGTKVSNSASSLVSKLKENDGEDSVVAKLEETFESTKTKLSDLDQEYDLVSKAKSAVGLTVDFSNSAIDKALELNEKYSIVDKTTDAVKKAVNKAKESI 231
BLAST of EWM30517.1 vs. NCBI_GenBank
Match: gi|397632841|gb|EJK70717.1| (hypothetical protein THAOC_07899 [Thalassiosira oceanica]) HSP 1 Score: 119.398 bits (298), Expect = 1.494e-29 Identity = 71/175 (40.57%), Postives = 106/175 (60.57%), Query Frame = 0
Query: 57 STALVPVNPQTIETSAAIVGTSAGIVFLGPVLGIVLGLLTNYAAKTDNDVGEAARGVGKTALEVFNYIVKINSKYQIGTKVSNSASSLVSKLKENDGED-SVVAKLEETFESTKTKLSDLDQEYDLVSKAKSAVGLTVDFSNSAIDKALELNEKYSIVDKTTDAVKKAVNKAKES 230
+TA+VP+N +T+E +A ++G G GPVLG + NYA+KTD +VGE V KT++E+FNY K++SKY++ + + KLK +D + V K+E ST K+S+++ EYDLV +A+G+ D AI KA E+NE+Y + DK A+ +AV KAK S
Sbjct: 51 TTAIVPINEETVEFTAGLLGGVVGFSLGGPVLGAIGAAAANYASKTDAEVGEVLSAVSKTSIEIFNYFSKLDSKYEVLDSAKSQLEVSLEKLKSSDSANPETVEKIESALSSTTEKISEINDEYDLVGTGMTALGVVGDLVEKAIIKAGEINEEYQLSDKAVAALGEAVEKAKAS 225
BLAST of EWM30517.1 vs. NCBI_GenBank
Match: gi|219109718|ref|XP_002176613.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411148|gb|EEC51076.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 119.013 bits (297), Expect = 2.411e-29 Identity = 67/175 (38.29%), Postives = 107/175 (61.14%), Query Frame = 0
Query: 57 STALVPVNPQTIETSAAIVGTSAGIVFLGPVLGIVLGLLTNYAAKTDNDVGEAARGVGKTALEVFNYIVKINSKYQIGTKVSNSASSLVSKLKENDGED-SVVAKLEETFESTKTKLSDLDQEYDLVSKAKSAVGLTVDFSNSAIDKALELNEKYSIVDKTTDAVKKAVNKAKES 230
S+ALVP+ +T+E +A I+G +AG + GPV+G + NYA+K D DV + + V KT ++++NY ++ KY+I K +S + KLK + D +AK+E+ +TK+K+ +++ EYDLV +A+G+ D I KA ELNE+Y + DK ++ AV KAKE+
Sbjct: 63 SSALVPIKEETVEFTAGILGGAAGFLVGGPVVGAITAAAANYASKMDGDVPDIVQAVSKTGIQIYNYFATLDEKYEILKKAQDSLQGTLDKLKAQETVDKEAIAKVEKALSNTKSKIEEINDEYDLVGGGLTALGVVGDLVEKTIKKAGELNEEYKLTDKAMASINSAVTKAKEA 237
BLAST of EWM30517.1 vs. NCBI_GenBank
Match: gi|224014104|ref|XP_002296715.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220968570|gb|EED86916.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 114.775 bits (286), Expect = 6.956e-28 Identity = 72/191 (37.70%), Postives = 110/191 (57.59%), Query Frame = 0
Query: 39 KPKISPAVSTPPAGGEPKSTALVPVNPQTIETSAAIVGTSAGIVFLGPVLGIVLGLLTNYAAKTDNDVGEAARGVGKTALEVFNYIVKINSKYQIGTKVSNSASSLVSKLKENDGED-SVVAKLEETFESTKTKLSDLDQEYDLVSKAKSAVGLTVDFSNSAIDKALELNEKYSIVDKTTDAVKKAVNKAK 228
+P+ + +S PA KS A+VP+N +T+E +A I+G G GP LG + NYA+KTD +VGE V KT +E++NY K++SKY++ K S + K+K ++ + + K+E +T K+ +++ EYDLV +A+G+ D AI KA ELNE+YS+ K A+ AV KAK
Sbjct: 27 RPRSTLFMSEEPAAPAIKSGAIVPINEETVEFTAGILGGVVGFALGGPALGAITAAAANYASKTDAEVGEVLSAVSKTTIEIYNYFAKLDSKYEVLDKAKAQLESALDKVKSSENANPETIEKIESALSNTNKKIREINDEYDLVGTGMTALGVVGDLVEKAIIKAGELNEEYSLSSKAMAAINDAVEKAK 217
BLAST of EWM30517.1 vs. NCBI_GenBank
Match: gi|298712872|emb|CBJ33389.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 107.071 bits (266), Expect = 2.917e-25 Identity = 67/185 (36.22%), Postives = 105/185 (56.76%), Query Frame = 0
Query: 45 AVSTPPAGGEPKSTAL-VPVNPQTIETSAAIVGTSAGIVFLGPVLGIVLGLLTNYAAKTDNDVGEAARGVGKTALEVFNYIVKINSKYQIGTKVSNSASSLVSKLKENDGEDSVVAKLEETFESTKTKLSDLDQEYDLVSKAKSAVGLTVDFSNSAIDKALELNEKYSIVDKTTDAVKKAVNKAK 228
AV+ P E AL V VN + E SA ++G AG GPVL VL + NY +K +N+ G A RGV A+E FN++ +NSKY + K V++LK + K+E+T + ++ + L EYDL +KAK A+G+ + +++AI K +EL ++Y + DK D++KK+++ K
Sbjct: 2 AVTDEPKEKEETKGALTVAVNTENTEFSAGVLGGLAGFFVGGPVLAAVLAVAANYGSKQENEAGVAVRGVSANAIEAFNFLTTLNSKYDVTGKAGAQLDKAVTELKSTGEAGDTIEKVEKTVKDLTSQATKLSSEYDLPAKAKQALGVAGELADTAIVKGIELEKEYKVTDKVKDSIKKSIDSTK 186
BLAST of EWM30517.1 vs. NCBI_GenBank
Match: gi|223999553|ref|XP_002289449.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974657|gb|EED92986.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 106.686 bits (265), Expect = 8.588e-24 Identity = 59/175 (33.71%), Postives = 102/175 (58.29%), Query Frame = 0
Query: 58 TALVPVNPQTIETSAAIVGTSAGIVFLG-PVLGIVLGLLTNYAAKTDN--DVGEAARGVGKTALEVFNYIVKINSKYQIGTKVSNSASSLVSKLKENDGEDS-VVAKLEETFESTKTKLSDLDQEYDLVSKAKSAVGLTVDFSNSAIDKALELNEKYSIVDKTTDAVKKAVNKAK 228
+A++P+N TIE +A ++G +A +V G PVL IV NY +K D +V E + + + +LE FN+ K++SKY + K+ S + KLK + GE++ +AK+EE T ++SDL + D +K +G + +++DKA++ N++Y + ++ AVK + KAK
Sbjct: 153 SAIIPINEATIEFTAGVLGGTAALVLGGGPVLAIVAAAAANYVSKKDELGEVNELVQAISRASLETFNWFAKLDSKYSVLGKLQTSLDESIEKLKNSGGENAETIAKIEEAVAKTTKQISDLANDTDFFEGSKQVLGAVGEVLETSVDKAVDANKEYKLTERAAGAVKGVIEKAK 327
BLAST of EWM30517.1 vs. NCBI_GenBank
Match: gi|1210519426|dbj|GAX21705.1| (hypothetical protein FisN_3Hh497 [Fistulifera solaris]) HSP 1 Score: 103.605 bits (257), Expect = 1.636e-23 Identity = 56/181 (30.94%), Postives = 104/181 (57.46%), Query Frame = 0
Query: 41 KISPAVSTPPAGGEPKSTALVPVNPQTIETSAAIVGTSAGIVFLGPVLGIVLGLLTNYAAKTDNDVGEAARGVGKTALEVFNYIVKINSKYQIGTKVSNSASSLVSKLKENDGED-SVVAKLEETFESTKTKLSDLDQEYDLVSKAKSAVGLTVDFSNSAIDKALELNEKYSIVDKTTDAV 220
+++ V PPA ALVP+ +T+E +A ++G + G GP+ G++ NY +K D DV + + V KT+++VFNY+ ++ KY++ K S + + LK+ + D + + K+E+ +T K+ +++ EYDLV +A+G+ D +DKA ELN++Y + +K +++
Sbjct: 32 RMTEEVEAPPAPKADVGGALVPIKEETVEFTAGLLGGAFGFAVGGPLFGLIAAAAANYVSKMDGDVSDVVQAVSKTSIQVFNYLATLDKKYEVLKKAQGSLENALDNLKKQESVDPATIEKVEQALANTNKKIKEVNDEYDLVGGGVTALGVVGDLVEKIVDKAGELNKEYQLTEKAKESL 212
BLAST of EWM30517.1 vs. NCBI_GenBank
Match: gi|1210531195|dbj|GAX10296.1| (hypothetical protein FisN_3Lh497 [Fistulifera solaris]) HSP 1 Score: 102.449 bits (254), Expect = 4.657e-23 Identity = 56/181 (30.94%), Postives = 103/181 (56.91%), Query Frame = 0
Query: 41 KISPAVSTPPAGGEPKSTALVPVNPQTIETSAAIVGTSAGIVFLGPVLGIVLGLLTNYAAKTDNDVGEAARGVGKTALEVFNYIVKINSKYQIGTKVSNSASSLVSKLKENDGED-SVVAKLEETFESTKTKLSDLDQEYDLVSKAKSAVGLTVDFSNSAIDKALELNEKYSIVDKTTDAV 220
+++ V PPA ALVP+ +T+E +A ++G + G GP+ G++ NY +K D DV + + V KT+++VFNY+ ++ KY++ K S + + LK+ + D + + K+E +T K+ +++ EYDLV +A+G+ D +DKA ELN++Y + +K +++
Sbjct: 32 RMTEEVEAPPAPKADVGGALVPIKEETVEFTAGLLGGAFGFAVGGPLFGVIAAAAANYVSKMDGDVSDVVQAVSKTSIQVFNYLATLDKKYEVLKKAQGSLENALDNLKKQESVDPATIEKVETALANTNKKIKEVNDEYDLVGGGITALGVVGDLVEKIVDKAGELNKEYQLTEKAKESL 212
BLAST of EWM30517.1 vs. NCBI_GenBank
Match: gi|1072233869|gb|OEU18599.1| (hypothetical protein FRACYDRAFT_268367 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 100.138 bits (248), Expect = 3.287e-22 Identity = 67/188 (35.64%), Postives = 108/188 (57.45%), Query Frame = 0
Query: 42 ISPAVSTPPAGGEPKSTA---LVPVNPQTIETSAAIVGTSAGIVFLGPVLGIVLGLLTNYAAKTDNDVGEAARGVGKTALEVFNYIVKINSKYQIGTKVSNSASSLVSKLKENDGED-SVVAKLEETFESTKTKLSDLDQEYDLVSKAKSAVGLTVDFSNSAIDKALELNEKYSIVDKTTDAVKKAVN 225
+ PAV+T EP+ A LV + +T+E +A ++G AG GP+LG V NY +K++N+ GE V K+ALE++NY+ ++ KY++ ++S S + KLK D D + + K+E ST+ K+S+++ EYDLV +A+G+ D + K ELNE+Y + DK A+ AV+
Sbjct: 30 VRPAVTTTFMSEEPEVAAGGKLVAIKEETVEFTAGLIGGVAGFAVGGPLLGAVGAAAANYVSKSENEAGEIVGAVSKSALEIYNYLATLDDKYEVLGAAASSLESALIKLKSQDKIDPAAIEKVESALASTQAKISEVNDEYDLVGSGLTALGVVGDLVEKTVKKVGELNEEYQLTDKAKVALSSAVD 217
BLAST of EWM30517.1 vs. NCBI_GenBank
Match: gi|397576494|gb|EJK50289.1| (hypothetical protein THAOC_30761 [Thalassiosira oceanica]) HSP 1 Score: 93.5893 bits (231), Expect = 3.876e-19 Identity = 56/194 (28.87%), Postives = 113/194 (58.25%), Query Frame = 0
Query: 40 PKISPAVSTPPAGGEPKSTALVPVNPQTIETSAAIVGTSAGIVF-LGPVLGIVLGLLTNYAAKTDN--DVGEAARGVGKTALEVFNYIVKINSKYQIGTKVSNSASSLVSKLKENDGEDS-VVAKLEETFESTKTKLSDLDQEYDLVSKAKSAVGLTVDFSNSAIDKALELNEKYSIVDKTTDAVKKAVNKAKE 229
PK + + + + G A++P+N + +E ++ ++G A I P+ +V+ NY ++ ++ ++ E + ++L+ N+ K++ KY + K+S + VS LK ++G+++ V K+E+T +ST ++LS L +E DLV +K A+G D ++IDKA++ N++Y + ++ +A KKA+ K K+
Sbjct: 120 PKAATSFNVDASAG-----AIIPLNKENVEFTSGVLGGVAAIALGANPLFAVVVAAAANYISRKEDLGEISEIVNSISTSSLQTLNWFGKLDEKYTVLDKLSETLDQQVSSLKSSEGKNAETVGKIEQTIKSTSSQLSQLAEELDLVEGSKQALGAFGDVLETSIDKAVDANKEYKLTERAGEAAKKAIEKVKD 308 The following BLAST results are available for this feature:
BLAST of EWM30517.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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