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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100133g16.1506.mrna |
| Orig protein id | gnl|cribi|Naga_100133g16.1506 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:240660..242230 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1824 ID=rna1824|Name=rna1824|organism=Nannochloropsis gaditana|type=mRNA|length=441bp
ATGGCGACCAAGGCGCAACAAAAAGAAAATCTTGAAAAAGTCACAGACTA
TGTTGAAGAGAGCGTGCTGGATGCGGACCGTATGGCAAAAGCCATGTCTT
CCCTGGAGAGTGACAAGAGCGGTGCACGGGCAGCAGCCGCTAAACTAGCG
AGAACAGCATATGACGAGTCGGCGTACTATTTGAGCTTTTTAAAAGAGAC
AGCTATCCACACTATTGACCTCTCATGGAGTCGCCAGTTGTTTATTCACC
AGCCAAGACTTGACAGTGGTACTCTCCACATCCTGTATCTTAAGTCATTT
CCTATAAAACGGGGGAGCCAGATCTCATCTTTTCTGAAGAGATTTTCTAG
CGAGTTGGAAGTGACCAGTGAAGCGGCAGAACAGGCACTCAAAGAAAGCG
GAGGAGATGTGGTAAAAGCGTTACAACGACTTCTACCCTGA back to topprotein sequence of rna1824 >rna1824-protein ID=rna1824-protein|Name=rna1824|organism=Nannochloropsis gaditana|type=polypeptide|length=292bp
MRFLAPRYSKTGIMLSTAKFSLLPQRRTSSIVLDLNIRSKRMQVTLRNAN
YLLHSKKSGLQESCTARLSCHLQYASLPTSSACRLRSLPGRGYQSPRTFS
STAGDGKAVLIYTGAHAGVIRTLKRVSLTTCIIGLFSTPFFLTLGSESVP
MAANVALTGIVLLATCGPTILLHAFTKPYIFALRVAPFVTADNDLEISDS
GDKSDRAVRRNTTPDMHFSADTIDFLSRRITTSFNLSDVKPLPNSTRPFV
SFSARDRLYFVHGETFPDKHLLHSLLGRPLKKSELEGSEQPN back to topmRNA from alignment at CM002458.1:240660..242230- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1824 ID=rna1824|Name=rna1824|organism=Nannochloropsis gaditana|type=mRNA|length=1571bp|location=Sequence derived from alignment at CM002458.1:240660..242230- (Nannochloropsis gaditana)
AGCACGAGGGATTGGGAAATCTTCGGCTCCTTTATTATTGGGCTCCAATA
ATTCAAAATTATATTCGGATTTCGAGCTTCTCCCTTTTTTTGCGCGAAGT
TCGACCCAGCCTATTCATGGAGCTGCCCACTTATACGACTACCCCTCCTT
CCGGAGGCATACACTATACATTTCAAGCCGAGTATTTTTTATCACTCAAT
TTTTTGAGTCACGTTTTGGTGGTTTCGAGTCTCAGCCCGACGTTTATCCG
TGATATTCCTGTCATTCTTACCCTCATCATCAAGCATGCACTCTACTTAG
ACTGCTATATTTTGATTGAATCCCTTTCAGCATGGAATATCCGCGTGCAG
AACGTAATAAACTGGTGACGGCATTGATCTTGCACCTTGTCTCATTTCAT
GCGCTTTCTCGCGCCCAGATACAGTAAGACAGGAATCATGCTCAGCACCG
CAAAGTTCTCACTGCTCCCGCAGCGGCGCACGTCTTCTATAGTTTTGGAT
CTCAATATTCGATCTAAAAGAATGCAGGTAACATTAAGGAATGCGAATTA
TCTGCTTCACTCAAAAAAATCGGGCCTACAAGAATCTTGCACAGCCCGCC
TTTCCTGCCATCTACAGTATGCATCATTACCAACATCTTCCGCCTGCCGC
CTTCGAAGCCTTCCTGGACGAGGCTACCAATCACCTCGCACCTTCTCTTC
CACGGCAGGCGACGGAAAGGCAGTATTGATTTATACTGGTGCGCATGCAG
GCGTCATTCGCACGCTTAAACGCGTCTCACTGACCACCTGTATCATTGGT
CTTTTTTCAACGCCTTTTTTTCTCACCTTGGGATCGGAATCCGTACCTAT
GGTAGGTAATAATCAGAAAATGGGAATCTATTTTGCGCGGGGTGACTCCA
ACACATGAGTAGGCGTAATCTTATTCTTACGCGCGCGGATTTTTTAAATT
GAATATGACTTTAGTGACACCTTCTGTCAGAAAAAGGGCATGCACGAGTG
TAAAGTTTGTATGGGCTGGATTTCTCCTCATACTGTACGTCTCCATGCTC
TGCTCTTCCAAAATTATCCTCACTGTCACGCCCCCTAGGCTGCTAACGTC
GCGCTAACTGGCATTGTCCTTCTGGCTACGTGCGGGCCCACAATTCTCCT
TCATGCCTTCACCAAACCTTACATTTTTGCTCTGCGTGTCGCTCCATTTG
TGACCGCCGATAACGATTTGGAGATTTCTGACAGCGGTGATAAGAGTGAC
AGAGCTGTGAGGAGAAATACAACTCCCGACATGCATTTTTCGGCAGACAC
AATCGACTTTCTCTCTCGTCGCATCACCACCTCTTTCAACTTGTCTGATG
TGAAACCTCTCCCCAATTCCACCCGTCCCTTTGTCAGCTTCAGTGCACGA
GACCGCTTATATTTCGTACACGGGGAAACATTCCCTGACAAACACCTTTT
ACACAGTTTGCTTGGACGTCCTCTTAAAAAAAGTGAGCTCGAAGGCAGTG
AACAACCAAATTAAGGGCCTGTAAAAGGAAGTTAAATCTGATACTAAAAC
ACGTACAGGAGCTTAAATAAC back to topCoding sequence (CDS) from alignment at CM002458.1:240660..242230- >rna1824 ID=rna1824|Name=rna1824|organism=Nannochloropsis gaditana|type=CDS|length=1758bp|location=Sequence derived from alignment at CM002458.1:240660..242230- (Nannochloropsis gaditana)
GCTGCTAACGTCGCGCTAACTGGCATTGTCCTTCTGGCTACGTGCGGGCC
CACAATTCTCCTTCATGCCTTCACCAAACCTTACATTTTTGCTCTGCGTG
TCGCTCCATTTGTGACCGCCGATAACGATTTGGAGATTTCTGACAGCGGT
GATAAGAGTGACAGAGCTGTGAGGAGAAATACAACTCCCGACATGCATTT
TTCGGCAGACACAATCGACTTTCTCTCTCGTCGCATCACCACCTCTTTCA
ACTTGTCTGATGTGAAACCTCTCCCCAATTCCACCCGTCCCTTTGTCAGC
TTCAGTGCACGAGACCGCTTATATTTCGTACACGGGGAAACATTCCCTGA
CAAACACCTTTTACACAGTTTGCTTGGACGTCCTCTTAAAAAAAGTGAGC
TCGAAGGCAGTGAACAACCAAATTAAATGCGCTTTCTCGCGCCCAGATAC
AGTAAGACAGGAATCATGCTCAGCACCGCAAAGTTCTCACTGCTCCCGCA
GCGGCGCACGTCTTCTATAGTTTTGGATCTCAATATTCGATCTAAAAGAA
TGCAGGTAACATTAAGGAATGCGAATTATCTGCTTCACTCAAAAAAATCG
GGCCTACAAGAATCTTGCACAGCCCGCCTTTCCTGCCATCTACAGTATGC
ATCATTACCAACATCTTCCGCCTGCCGCCTTCGAAGCCTTCCTGGACGAG
GCTACCAATCACCTCGCACCTTCTCTTCCACGGCAGGCGACGGAAAGGCA
GTATTGATTTATACTGGTGCGCATGCAGGCGTCATTCGCACGCTTAAACG
CGTCTCACTGACCACCTGTATCATTGGTCTTTTTTCAACGCCTTTTTTTC
TCACCTTGGGATCGGAATCCGTACCTATGGCTGCTAACGTCGCGCTAACT
GGCATTGTCCTTCTGGCTACGTGCGGGCCCACAATTCTCCTTCATGCCTT
CACCAAACCTTACATTTTTGCTCTGCGTGTCGCTCCATTTGTGACCGCCG
ATAACGATTTGGAGATTTCTGACAGCGGTGATAAGAGTGACAGAGCTGTG
AGGAGAAATACAACTCCCGACATGCATTTTTCGGCAGACACAATCGACTT
TCTCTCTCGTCGCATCACCACCTCTTTCAACTTGTCTGATGTGAAACCTC
TCCCCAATTCCACCCGTCCCTTTGTCAGCTTCAGTGCACGAGACCGCTTA
TATTTCGTACACGGGGAAACATTCCCTGACAAACACCTTTTACACAGTTT
GCTTGGACGTCCTCTTAAAAAAAGTGAGCTCGAAGGCAGTGAACAACCAA
ATTAAATGCGCTTTCTCGCGCCCAGATACAGTAAGACAGGAATCATGCTC
AGCACCGCAAAGTTCTCACTGCTCCCGCAGCGGCGCACGTCTTCTATAGT
TTTGGATCTCAATATTCGATCTAAAAGAATGCAGGTAACATTAAGGAATG
CGAATTATCTGCTTCACTCAAAAAAATCGGGCCTACAAGAATCTTGCACA
GCCCGCCTTTCCTGCCATCTACAGTATGCATCATTACCAACATCTTCCGC
CTGCCGCCTTCGAAGCCTTCCTGGACGAGGCTACCAATCACCTCGCACCT
TCTCTTCCACGGCAGGCGACGGAAAGGCAGTATTGATTTATACTGGTGCG
CATGCAGGCGTCATTCGCACGCTTAAACGCGTCTCACTGACCACCTGTAT
CATTGGTCTTTTTTCAACGCCTTTTTTTCTCACCTTGGGATCGGAATCCG
TACCTATG back to top
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