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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100133g13.1516.mrna |
| Orig protein id | gnl|cribi|Naga_100133g13.1516 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:232835..235623 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1821 ID=rna1821|Name=rna1821|organism=Nannochloropsis gaditana|type=mRNA|length=2992bp
TATTGTTTCTATATCATTCGTGCTGTGTACTTTCCAAAACACGTGTTTGT
CCTGGTCCTTCTTTACGTTCTCGCCAGCAACAAGGTGGCGGTGCCGATAC
TTCGTCCAATTCGACGGAGGGATTTGGGAGAGATATTTCGATCACACGCA
AGGACTCACAGGAAATATGGATATCCCACTTATGCTTTTATTGCGTGCAT
ACATACAAGAATTTATAATATTAAGGTTGCCTCTTTTTTTTGCTTGACAC
CCGCGAGTCAGACTTGAAATCGAGTGCAGGACACGATAGAGGCTAGATGG
GAAGGACGCACGGCATTACGCCACCACCACCTCCACTTAACGAGATAAAG
AGGTTGACGTGTCCTCTGAAAATTTTTATGCGCGCACATTAATCTTCAGA
AACACATACAAAGACGTGCAATGTCGCGCATGTGTTCACATGCTGGCTCC
TTTGGCATTCTGACGAGCAATCCGAAGTTACTCCAGTCACAACATTTGGA
AAGCTCGAAATCGGTCGTATGGCTTCCCTCCCCTCATGATCCTTCTAAAT
CTACCCACATATCGACATCCGCAGGGGGACGGAGGGCCAAAGGCTAACGT
GGGCCTTGCGTCCCATACCCTGGGGCGGTGATTCGTGCAAAGTCACCAAT
CACGTCCTTTTACCCGCTGCATTCGGACCCTTAATTCGTGGTTCTACAAT
TCCTGGAAGAAGAAGTTGCAAACATGGCAATGACATGGCTGAGAGGTGGA
AAGGGAAATGGACCAGGAGGGGAGAAAGTCGTCGTCGATGCCGAGGCTAA
AGATAAAGCTGACCGTATGCAGGCGTATCTGGAGGAGAAATACGAACGCT
TAAAGCGGGACAAAGAGGAAGAGCAAGACCGACGGGCGAGCCTCGAGGAG
ACAATGGCCCGGCTCAATCTGGACGACGCGCAGAAGGAACACTACCGGCA
GGAGCTGGAGCGAATGGAGGCAGAGTACAGGACTGAGCAACAGAGGCGGC
TAACCACCAACGATTTTGATCCCTTGGTCATCATCGGACGCGGAGCCTTT
GGAGAAGTCCGTCTTGTCCGAAAAAGGGCGGACGGAGAAATCTACGCCAT
GAAATCCATGATTAAGGAGGCCATGGTCAGGAAAAACCAGGTGGGCCACG
TCCGGGCCGAGCGCGACGTGTTGGCGGTGGCGGACAATCCATGGATTGTC
ACCTTGCATTATTCCTTCCAGGATGACCACATGCTCCACATGGTGATGGA
ATTCCTCCCCGGGGGAGATTTGATGACCCTCCTGATCCGAGAAGACACCT
TCCCCGAGGCGGCCACCCGCCAGTACATGGCCGAGATGATCATGGCAGTC
GCCTCCGTGCACGCGCTGGGCTACATCCACCGCGACCTCAAGCCTGACAA
CATCCTCTTGGACTGGGAAGGACACCTCAAGCTCTCAGACATGGGTCTGT
GCAAGAAAATGGAAACGGGGGAGGCGCACTTGCTCACCGACAATGCCTCC
CTCTCCATCCATGCCTCTCCCCATGGAGCCGGGGCCTGCCCGACGCCACC
GGCCTCGGCCCACTTTGCTCCCCCTCCCCATCACCACCCCCACCCCCAGT
ACCCTCCTCTCGTCCACCCTCCTCCCTCTCAAACCCCGCCTTCCACTTCC
TCCCTCCCGCCCTCCTCCCCGGCCCGGGACCGGCGGCTGGCCTATTCGAC
GGTTGGCACGCCGGACTACATCGCTCCCGAGGTGTTGATGCAAAAAGGGT
ACGGGAAAGAATGCGACTGGTGGAGCCTGGGTGTGATTATGTACGAATGC
CTGGTTGGCTACACCCCCTTTTATGCGGAAGAGCCAGTGATGACCTGCCG
TAAAATTTTACGCTGGCAGCAGCATTTGGAAGTACCGGGGGAGGTCCGCG
CGCGCGTGTCACCCGCCTGTTTGGATTTCATGTTCTCTCTAATGGCGCCG
GCCGAACGCCGGCTGGGGCGGCATGGGTGGGAGGAGATCAAGGCCCACCC
CTGGTTTGTCGAGTCGGGCTTGGACTGGGACGCATTGAAAACGGCGCCGG
CTCCATACAAACCGGAAGGCTGGGAAGTACTGCGAGCCATGCTGGAGGAT
TTGCGGCAGGTGCCCAAGGAGGATGTGCGGTACCGGCCGTTGCTGGAGCA
GATTACGGCAAATTTTGACGATTTTCCCGAGACGGAGGGGGGATTGGGGG
CCGTGGGGGGGGGCGGGGCGGCGGGCCGCAAGGAGAAGGGCCACGAATTC
ATTGGGTACACGTACAAGCGAGGCTCCAAACTGGTGGTACGGTCGGCGAT
GGAGGTAGGGCTGTTCGGACCCCCTTTGCGGGAAGGATCGAGGGAGGAAT
TGATGGGAGAGGAGGAGGCTTGAGGAGAAAGGGAGGAGGGTGGATTTTGC
AAGTAGATGGACAAGCAAGGAAGCAGGGCATTGCACATGCGAGGCAGTAG
AGAAGGGAAGGGAGGATGCCAGTGCTGGGCTATTTAAAGGCTTGGCACAG
GGTGACGTGCCCGGTAGGACGGCAACAAAAGGGAGGGAGGCAGGGGGCGA
GGAGCAAGGCTGCAGACGAGGGATGGAGGAGAGAGCGGGAAGGTGAGGAT
CTGGGGAGCAGGGCCTCTGGCTTAGCCCGTGCGCAGCATTGTCTGGTCGG
ACCCCGGAGTCCCGCGGGCGTGGACCCGAGAAGGGTGGGACGACGCCAAT
CATTGTTTCCAAAAATCAATGAAATGGACAGCACGTTGCATGAACATAAA
TAGGAATGCGAGGTCTATGGCATCAAAACAGTGAATTAGCGTTAATGAAT
CAATGAGTAGGACACGATAAGCTTAGGTTGCGGTCGGGAGGGGGGGAGGC
GTCTTGCTTCCTCCTCCTTCATCAAAGAGCCCCGCTAAAAAACAGAAAAA
AACGAAGGCGAGACCAACACGCTGGGCGACAAGGCTCATGTGCGCTTGTA
CACATGCTCCTCTTCCCACTTTTCTTGGCTCTACCGCCACTC back to topprotein sequence of rna1821 >rna1821-protein ID=rna1821-protein|Name=rna1821|organism=Nannochloropsis gaditana|type=polypeptide|length=691bp
MEILLQLHAQGAIRFDFDFSKEKEQGTDLFDHFSIQCLDRLKHTMNAPCI
CSRRGWLLCLCCWVVAATSTCPLGSVTIGGVKLGVPSTPLDWCLGYNTTV
RPNTDFTMVGVTITPQGDDFLVEHGRGLWKYLDIRTDIAENTTGTIFENL
FGMTYSEYSAIPAVSSNPVKGWENQPIVYLTPKDLAKVWILTTDGAEGVS
ADLPSAQGGYASAAGTIAVAGQESGGQNPGAFTYQLNSGGRPQFNSPITA
LDPVFAVNPANDDGSNGGFWQISNFVTTPSVLPCFENAGWQGTTVDDAKK
AILYNPFFQAKITMFWATKKIDNVVCITGDNTPCTPNQSACTGLDWIQCK
PDCLAGALCKGDGIWNAPLVDSMFNILTGADQTAQRCNGMPTSLLSQFGT
YLAAVDLIQAGYVPTAPSTWSTDTNFNVACQSMPRFVETICNCGAPCPPS
GYPTHCSTLPYWAMPTSNGNTCGGQNCLDYQTSVTGFPIPTVPSGIVSVS
ATILAPAERRLLGGGGSSSESLSRWTMQEEHKRRLPTLVFDNFVYNSGLC
TDPSDTTLNTTADFPIAWTKAPLADQIKAFIAQQASLNNVTICSLTVLSV
RYVSRNICQSLLKMEKALALSLCKKDRVCRKAAQTNYRLNMYGCKTAHKF
CRATLKEQRKNSLLACKQSSPFNLQCRKNATGTFRQLSKTC back to topmRNA from alignment at CM002458.1:232835..235623- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1821 ID=rna1821|Name=rna1821|organism=Nannochloropsis gaditana|type=mRNA|length=2789bp|location=Sequence derived from alignment at CM002458.1:232835..235623- (Nannochloropsis gaditana)
TACTAATGCCTCTTCTCGCTTATGGTCTGTGTCGAGTAGGCATCACTGGT
GGCTCACCCATCTCGTAGGTCTTCTTCTAAGTCCGATCTTCCCTTGAGTG
GCTGTTGCGTTTTCATAAAATTGTGCCTGTGACTGGCATTTTGATGGAAA
TACTCCTACAGCTTCACGCTCAGGGGGCCATCCGGTTTGATTTCGACTTC
AGTAAAGAGAAAGAGCAGGGCACTGACTTATTCGATCATTTCTCTATTCA
GTGCTTGGACAGATTAAAACACACCATGAATGCACCCTGCATTTGCAGCC
GACGAGGTTGGCTGCTCTGTTTATGTTGCTGGGTGGTCGCTGCCACCTCC
ACGTGCCCTCTGGGGTCGGTAACCATTGGCGGGGTGAAACTCGGCGTACC
TAGCACCCCTTTGGACTGGTGCCTGGGTTACAACACCACAGTGCGGCCCA
ATACGGATTTTACAATGGTCGGGGTAACTATAACGCCGCAAGGTGACGAT
TTTCTGGTGGAGCACGGGCGTGGCCTCTGGAAGTATTTGGACATTCGAAC
GGACATCGCAGAAAACACGACGGGGACCATCTTTGAGAACTTGTTCGGGA
TGACCTACTCCGAATACTCGGCCATTCCTGCCGTGAGCAGCAACCCCGTG
AAAGGATGGGAGAATCAACCAATCGTCTACTTGACGCCTAAAGACCTGGC
CAAGGTCTGGATACTTACAACTGATGGAGCTGAGGGAGTCTCGGCCGACC
TTCCCAGCGCACAAGGCGGTTACGCAAGTGCCGCCGGCACCATCGCCGTG
GCTGGGCAAGAGTCCGGTGGACAAAATCCTGGAGCATTCACTTACCAGCT
TAACTCAGGCGGGAGGCCCCAATTTAACTCGCCCATAACGGCCTTAGATC
CGGTTTTTGCTGTGAACCCAGCCAATGACGACGGCAGCAACGGAGGCTTC
TGGCAGATCTCCAACTTTGTGACCACGCCCAGCGTCCTTCCCTGCTTTGA
AAACGCGGGCTGGCAGGGCACCACAGTGGACGACGCCAAAAAGGCGATCC
TTTATAACCCCTTCTTCCAGGCCAAAATAACCATGTTCTGGGCAACGAAA
AAGATCGACAACGTGGTCTGCATAACCGGCGACAACACTCCTTGCACGCC
CAACCAATCGGCATGCACGGGGTTGGATTGGATCCAGTGTAAACCGGACT
GCTTGGCGGGCGCCCTTTGTAAAGGAGACGGCATTTGGAATGCGCCTTTA
GTGGACTCGATGTTTAACATCTTGACGGGCGCGGATCAAACGGCGCAGCG
TTGTAACGGGATGCCCACGAGTCTTTTATCACAATTTGGGACCTATCTAG
CCGCCGTCGATCTCATTCAGGCGGGCTACGTGCCTACAGCCCCTTCCACC
TGGTCGACAGACACCAACTTCAACGTGGCCTGTCAGAGCATGCCTCGTTT
CGTCGAAACGATCTGCAATTGCGGGGCTCCCTGTCCCCCCTCGGGGTATC
CCACCCACTGTAGCACCCTTCCCTACTGGGCGATGCCGACTAGTAACGGG
AATACTTGCGGTGGACAAAATTGTTTGGATTATCAGACGTCAGTAACTGG
CTTCCCAATCCCAACGGTCCCGTCCGGCATCGTGTCTGTGTCGGCTACGA
TCTTGGCCCCTGCTGAAAGGCGGCTTTTGGGGGGGGGAGGAAGCAGTAGT
GAGAGCCTGAGCCGATGGACAATGCAAGAAGAGCACAAACGGCGCCTTCC
TACCCTCGTATTCGATAATTTTGTGTACAATAGCGGACTTTGCACAGATC
CATCAGACACCACCCTGAATACAACTGCGGACTTTCCGATAGCATGGACG
AAAGCTCCTCTTGCCGATCAGATCAAGGCCTTCATCGCGCAGCAAGCTAG
TCTGAATAATGTGACCATTTGTTCTTTGACGGTACTCAGCGTCCGCTACG
TTTCACGGAACATATGTCAGTCACTTCTCAAGATGGAAAAAGCCTTGGCG
CTCAGTCTTTGCAAGAAAGACCGTGTTTGTCGCAAGGCAGCACAGACCAA
CTACCGGCTGAATATGTATGGTTGCAAGACAGCTCATAAATTTTGCCGGG
CCACTTTGAAGGAGCAGCGGAAAAATTCCTTGTTGGCCTGCAAGCAGAGT
TCGCCATTTAACTTGCAGTGCCGCAAAAATGCTACGGGTACCTTCAGGCA
GCTATCCAAAACCTGTTAAACAATATGGTAAAAACGACTTATTGGAGAGG
TATTGATATTTCTCGGTAGAGATAAAAGAGAGATTACTATGCGTGGCATA
GCAAGGCACCGGATAGCCCACCCTGTGTGAATGAGGCAATAGTTGAATCA
CAAGGGGGGGAATCCAGCGAACGCGCTTTGCACCTTGACGGGTATATCTT
GTTTTCCTCTTCTTCCTTGTGGGTACTGTGGATCTGTATAGCTTATTACC
ATACTAGGAGCGGATGGGCGTTAGAGGGTGGGACTATTGCCCAAGGCCTT
GAAGACTTCGTGAAGTTATTGGCTTTCGCATGCGCGCTACGTGATTAAAG
ACGTAATCGCGATATAGAGGCAATCCGCACAGTTCTTGTTCCTTTTTTGA
ACTCTTCAATGGGTTCACAATGGAAATGACACAACACTTTCCCGTAATCG
TTCCTCAACCTCCGATGAGCTCGTTGCAAAATTGCTCAGAGGGCGATCCT
TCCGTTTTAATAAATAGTCGGAAATATCGAGCGCGGTTTCGATTGACGCG
CTATTGGATTTTTTTTTTTAAATATGGACGAAAAAAAGG back to topCoding sequence (CDS) from alignment at CM002458.1:232835..235623- >rna1821 ID=rna1821|Name=rna1821|organism=Nannochloropsis gaditana|type=CDS|length=2076bp|location=Sequence derived from alignment at CM002458.1:232835..235623- (Nannochloropsis gaditana)
ATGGAAATACTCCTACAGCTTCACGCTCAGGGGGCCATCCGGTTTGATTT
CGACTTCAGTAAAGAGAAAGAGCAGGGCACTGACTTATTCGATCATTTCT
CTATTCAGTGCTTGGACAGATTAAAACACACCATGAATGCACCCTGCATT
TGCAGCCGACGAGGTTGGCTGCTCTGTTTATGTTGCTGGGTGGTCGCTGC
CACCTCCACGTGCCCTCTGGGGTCGGTAACCATTGGCGGGGTGAAACTCG
GCGTACCTAGCACCCCTTTGGACTGGTGCCTGGGTTACAACACCACAGTG
CGGCCCAATACGGATTTTACAATGGTCGGGGTAACTATAACGCCGCAAGG
TGACGATTTTCTGGTGGAGCACGGGCGTGGCCTCTGGAAGTATTTGGACA
TTCGAACGGACATCGCAGAAAACACGACGGGGACCATCTTTGAGAACTTG
TTCGGGATGACCTACTCCGAATACTCGGCCATTCCTGCCGTGAGCAGCAA
CCCCGTGAAAGGATGGGAGAATCAACCAATCGTCTACTTGACGCCTAAAG
ACCTGGCCAAGGTCTGGATACTTACAACTGATGGAGCTGAGGGAGTCTCG
GCCGACCTTCCCAGCGCACAAGGCGGTTACGCAAGTGCCGCCGGCACCAT
CGCCGTGGCTGGGCAAGAGTCCGGTGGACAAAATCCTGGAGCATTCACTT
ACCAGCTTAACTCAGGCGGGAGGCCCCAATTTAACTCGCCCATAACGGCC
TTAGATCCGGTTTTTGCTGTGAACCCAGCCAATGACGACGGCAGCAACGG
AGGCTTCTGGCAGATCTCCAACTTTGTGACCACGCCCAGCGTCCTTCCCT
GCTTTGAAAACGCGGGCTGGCAGGGCACCACAGTGGACGACGCCAAAAAG
GCGATCCTTTATAACCCCTTCTTCCAGGCCAAAATAACCATGTTCTGGGC
AACGAAAAAGATCGACAACGTGGTCTGCATAACCGGCGACAACACTCCTT
GCACGCCCAACCAATCGGCATGCACGGGGTTGGATTGGATCCAGTGTAAA
CCGGACTGCTTGGCGGGCGCCCTTTGTAAAGGAGACGGCATTTGGAATGC
GCCTTTAGTGGACTCGATGTTTAACATCTTGACGGGCGCGGATCAAACGG
CGCAGCGTTGTAACGGGATGCCCACGAGTCTTTTATCACAATTTGGGACC
TATCTAGCCGCCGTCGATCTCATTCAGGCGGGCTACGTGCCTACAGCCCC
TTCCACCTGGTCGACAGACACCAACTTCAACGTGGCCTGTCAGAGCATGC
CTCGTTTCGTCGAAACGATCTGCAATTGCGGGGCTCCCTGTCCCCCCTCG
GGGTATCCCACCCACTGTAGCACCCTTCCCTACTGGGCGATGCCGACTAG
TAACGGGAATACTTGCGGTGGACAAAATTGTTTGGATTATCAGACGTCAG
TAACTGGCTTCCCAATCCCAACGGTCCCGTCCGGCATCGTGTCTGTGTCG
GCTACGATCTTGGCCCCTGCTGAAAGGCGGCTTTTGGGGGGGGGAGGAAG
CAGTAGTGAGAGCCTGAGCCGATGGACAATGCAAGAAGAGCACAAACGGC
GCCTTCCTACCCTCGTATTCGATAATTTTGTGTACAATAGCGGACTTTGC
ACAGATCCATCAGACACCACCCTGAATACAACTGCGGACTTTCCGATAGC
ATGGACGAAAGCTCCTCTTGCCGATCAGATCAAGGCCTTCATCGCGCAGC
AAGCTAGTCTGAATAATGTGACCATTTGTTCTTTGACGGTACTCAGCGTC
CGCTACGTTTCACGGAACATATGTCAGTCACTTCTCAAGATGGAAAAAGC
CTTGGCGCTCAGTCTTTGCAAGAAAGACCGTGTTTGTCGCAAGGCAGCAC
AGACCAACTACCGGCTGAATATGTATGGTTGCAAGACAGCTCATAAATTT
TGCCGGGCCACTTTGAAGGAGCAGCGGAAAAATTCCTTGTTGGCCTGCAA
GCAGAGTTCGCCATTTAACTTGCAGTGCCGCAAAAATGCTACGGGTACCT
TCAGGCAGCTATCCAAAACCTGTTAA back to top
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