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Properties
| Property Name | Value |
|---|
| Product | Hepatocellular carcinoma-associated antigen 59 |
| Orig transcript id | gnl|cribi|Naga_100013g36.9750.mrna |
| Orig protein id | gnl|cribi|Naga_100013g36.9750 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:477757..479118 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna182 ID=rna182|Name=rna182|organism=Nannochloropsis gaditana|type=mRNA|length=2176bp
AGAGACAGGGTAGTGAACTCCTCCATGGCCATTGCAGGTCAACGCCAGAG
CAGCTGTGATACCCTATAGCCTTTTTGGAACGAAGAGAAGTATTCAACGT
GGGCAATGTACGTAAATCTGCAGGAAACCAGGTCGGACCCCAAAAACATG
GCACGCGTTTCTGCGCTCGCTCATGAGTTACGGCGATGCGGAATTTGACC
AAAGCGACAAACTGGTCACCCTCTTTCCACGGGCTTTCAAGGAAGCATTC
CTGTCATCAGGTCACGGCTCAATGGTAGAACGGTCGTTGCAGGGGAGTGG
TGGGCGCGATGAGACAACCAGGGACTGTTTATGTTGATGTGGACTGCGGT
TGGCTTGTGCCAGCCGTAGATGGTGAGGAGTGTTTTTACGACAACGCGCA
TCTTCAACTGTGTACTTTGGTCCAGCATTGGTCCGTCGTCTTAATCTGAG
AAAAAAAATCCTCAACATTGAGTTTCTTTGCCATGTCTCAATGCCATTTT
GCATTTGTCCTTAATGTGGGGATAAAGGATCATATGCATGTGGCTAGCCT
TCTCTGTACGGCCCATACACAGACAAGCCGGTGTCGCAGACTGAGATGCA
TTCACACGTGTTCTGCTTAAGTCTAGAGCGTATGTATGCGCATAAATATT
GCCTTATGTCATTACATCGTGTTTTTGAAACAGACCGAATCGGAACGTCT
TCGCCTCGTCCGCCATGCACGTCGACCATCCAGACAGTTTAAACGGTATC
ATGCCTTCTTGCCAATACACACCCAAGAATATTCTGGTGACCGGTGGTGC
GGGTTTCATCGGGTCTCATGTCGCAATCCTGCTGGCGCACAGGTATCCGA
AGTACAAAATTGTCGTTTTGGACAAGTTGGATTATTGCGCTTCGTTAGAA
AATCTCGCGGATGTCACCCGCCGAAGAAATTTCAAATTCGTGAAGGGCAA
CATCTGCTCCTCCGACTTGGTCAATTTCGTGTTGGAGGAGGAAGAAATTG
ACACGATCGTGCACCTGGCGGCGCAGACCCATGTGGACAACAGCTTTGGC
AACTCCTTCTCCTTTACGCAGAACAACATTTTAGGTACGCACGTGCTTTT
GGAGAGTGCCAAAGTGCATGGCATCCGGCGGTTCGTACACGTCTCCACTG
ACGAGGTGTACGGGGAAGGCGCCGCGGGCCAGGAGCCCATGTTCGAGGAC
AACGTCTTGGAGCCCACCAACCCGTACGCAGCGACCAAGGCCGGTGCCGA
ATTTCTGGCCAAGTCTTATCACCGCTCCTTCAATCTGCCCGTTATCATCA
CACGGGGGAACAACGTGTACGGTCCTCATCAGTACCCAGAGAAGCTCATT
CCCAAGTTCATCAACCTCCTACTCCGAGGGCGCCGGCTGACGCTGCATGG
GAATGGGCTCAACACGCGCAACTTCCTGTACGTGACGGACGTGGCGCGTG
CCTACGATGTGGTCCTTCACTTTGGAGAGACGGGCAAGATCTACAACATT
GGGGGCACGCACGAAATGGCCAACCTGGAGGTCGCCAAGGACGTGATCCG
GAAGATGGGCCTCCTCTCTGGCCGCGAAGCCGGGGCCCAGGGGGCTGATG
TGGACGGAGTCGTCGGCACCAACGCTGTTGTCGACCGGAGCCAGGTGGGA
CTTGAGAAGGACCAGGAAAAGGCTTCGATTGGAAAGGACGTGGGACAGGG
CGATGCCTCGATTACACCGGGCGTCGCGGCCGCTGGGAACATCGAGGAAG
ATGCAGCATACGCAAGGCTCCTGACCTTTGTGGAGGATCGGCCCTTCAAT
GACCTTCGCTATTCGATCAATAGCGAGGCCTTGCGACGGCTGGGGTGGCG
TGAGGAGGTAGCGTGGGAGGATGGGCTCGCTCGGACGATCGACTGGTACC
GGCAGCAGGCGCAAGACCGGTGGGGCAACATCGAGGCCGCCCTGGTCGCG
CACCCGCAGGGGCCCTCGCCGGACGATGGAGCTTGAGCGGGCTGTGAGGC
TGCAGGGGATGGTCGCCAAGGGCTGTGTTTGTCTCGGGCATGACTACATC
TTTCCAACGGGCGCTTCCACTCGCACGGGTGGGGGGAACGAACGCAGTGC
ACGACGTGGGGTGCTAGGGAAGATGAGGTTGTACATTAACTGAAGGCGAC
CAAAAAAAGACATGTGGCTCCTTCGG back to topprotein sequence of rna182 >rna182-protein ID=rna182-protein|Name=rna182|organism=Nannochloropsis gaditana|type=polypeptide|length=275bp
MRRRRAENSDDEENDNPGIKIKKLVQIREEQKQRKVRLGIQAASTLETER
AGAGGSRKESKAAAEEEEDEAEQQRSIGEMMESSFTGMKYVTKDDTNVHE
RIMEQYIEERLGNVKEEAPEVVVPSEAVPPSKVSRREQLLAITEEIHARA
RGPAGDKAADAEGGVGEGAPIAFSTGIAEVALPVEFKLQNIEATERARLL
QEEQLLLRQQGEKKGEIIGSLTHNYHHHRKEYAINMRAREGKPKGIFRRE
DGEGPRGRDTMTDDQVYAKFKKRKY back to topmRNA from alignment at CM002455.1:477757..479118- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna182 ID=rna182|Name=rna182|organism=Nannochloropsis gaditana|type=mRNA|length=1362bp|location=Sequence derived from alignment at CM002455.1:477757..479118- (Nannochloropsis gaditana)
ATGCGGCGTAGGAGAGCAGGTAAGTCAGGAAGGAGGCAGGGATGGCCCGT
ATATTTGTTCCGCAAACCCGAGTATTTCAACATTCCTTCACACTCTGAAA
TTCGCCCTGCAGAGAACTCCGATGATGAGGAAAACGACAACCCGGGCATC
AAGATAAAAAAACTTGTCCAGGTCTGTAGTGGTCTGAAGCTGGGTGAGGA
TGTGTGCGTGTGGGGTACCCTGCCCGCGGCCCGTGTTACCGGGTATGCTG
TCGCTGGGAGTGACGCACGAATGGCTGCTTCTTACTTTATCTAATCAGAT
ACGAGAAGAGCAGAAGCAGCGCAAAGTTAGGCTGGGCATCCAGGCGGCCT
CCACCCTTGAGACCGAGCGTGCCGGGGCCGGCGGGAGCAGGAAGGAAAGC
AAAGCGGCGGCGGAGGAGGAGGAAGATGAGGCCGAGCAACAGCGCAGCAT
TGGAGAGGTAGGGTGCGGAAAGGAAAAGAATTAGTGTCTACGCACGTATG
CGCGTGTGTGTGTGGGGGAGGGATTTTCGCGATTTTGTCCCTATATCGCA
CTTCGTCACAAGATTGGAACGCCTAATGCAACTTATGTGGCCATTCGCAT
CCCTAGATGATGGAGTCAAGTTTCACGGGAATGAAATACGTGACAAAGGA
CGATACCAACGTCCACGAAAGAATCATGGAGCAGTACATCGAAGAAAGGC
TGGGCAACGTGAAAGAGGAGGCGCCTGAGGGTATGTACCGGAACCTGACG
AGTTATGTTATGGAGCGAATGATTCGTGTGCAATGACAGTCATGCCCCTA
ACACGATGCCGCCTGCTGACTCGTGCCTTTCCCAACCATCGCGCAATGCA
CCTCTTCTTCTCAGTCGTCGTCCCGAGCGAGGCTGTCCCGCCCTCGAAGG
TGTCGCGCCGAGAGCAGCTTCTGGCCATCACGGAAGAGATCCATGCCCGG
GCTCGCGGCCCGGCGGGCGACAAGGCCGCCGACGCGGAGGGGGGCGTGGG
GGAGGGAGCCCCCATCGCTTTCAGCACCGGGATCGCCGAGGTGGCCCTGC
CCGTGGAGTTCAAGCTGCAGAACATTGAGGCCACTGAGCGGGCACGGCTG
CTCCAAGAAGAGCAACTCTTGCTCCGGCAGCAAGGGGAGAAGAAGGGCGA
AATCATCGGGAGCTTGACGCACAATTACCACCACCATCGAAAGGAGTATG
CGATCAACATGCGGGCCCGCGAAGGGAAGCCCAAGGGGATATTCAGGCGC
GAGGACGGTGAGGGCCCCAGAGGTCGCGACACTATGACCGACGACCAGGT
CTACGCGAAGTTCAAGAAGAGGAAGTACTGAAAAGAAGCAAGGGAATACC
ACAGTCAACAAT back to topCoding sequence (CDS) from alignment at CM002455.1:477757..479118- >rna182 ID=rna182|Name=rna182|organism=Nannochloropsis gaditana|type=CDS|length=4140bp|location=Sequence derived from alignment at CM002455.1:477757..479118- (Nannochloropsis gaditana)
TCGTCGTCCCGAGCGAGGCTGTCCCGCCCTCGAAGGTGTCGCGCCGAGAG
CAGCTTCTGGCCATCACGGAAGAGATCCATGCCCGGGCTCGCGGCCCGGC
GGGCGACAAGGCCGCCGACGCGGAGGGGGGCGTGGGGGAGGGAGCCCCCA
TCGCTTTCAGCACCGGGATCGCCGAGGTGGCCCTGCCCGTGGAGTTCAAG
CTGCAGAACATTGAGGCCACTGAGCGGGCACGGCTGCTCCAAGAAGAGCA
ACTCTTGCTCCGGCAGCAAGGGGAGAAGAAGGGCGAAATCATCGGGAGCT
TGACGCACAATTACCACCACCATCGAAAGGAGTATGCGATCAACATGCGG
GCCCGCGAAGGGAAGCCCAAGGGGATATTCAGGCGCGAGGACGGTGAGGG
CCCCAGAGGTCGCGACACTATGACCGACGACCAGGTCTACGCGAAGTTCA
AGAAGAGGAAGTACTGAATGATGGAGTCAAGTTTCACGGGAATGAAATAC
GTGACAAAGGACGATACCAACGTCCACGAAAGAATCATGGAGCAGTACAT
CGAAGAAAGGCTGGGCAACGTGAAAGAGGAGGCGCCTGAGGATACGAGAA
GAGCAGAAGCAGCGCAAAGTTAGGCTGGGCATCCAGGCGGCCTCCACCCT
TGAGACCGAGCGTGCCGGGGCCGGCGGGAGCAGGAAGGAAAGCAAAGCGG
CGGCGGAGGAGGAGGAAGATGAGGCCGAGCAACAGCGCAGCATTGGAGAG
AGAACTCCGATGATGAGGAAAACGACAACCCGGGCATCAAGATAAAAAAA
CTTGTCCAGATGCGGCGTAGGAGAGCAGTCGTCGTCCCGAGCGAGGCTGT
CCCGCCCTCGAAGGTGTCGCGCCGAGAGCAGCTTCTGGCCATCACGGAAG
AGATCCATGCCCGGGCTCGCGGCCCGGCGGGCGACAAGGCCGCCGACGCG
GAGGGGGGCGTGGGGGAGGGAGCCCCCATCGCTTTCAGCACCGGGATCGC
CGAGGTGGCCCTGCCCGTGGAGTTCAAGCTGCAGAACATTGAGGCCACTG
AGCGGGCACGGCTGCTCCAAGAAGAGCAACTCTTGCTCCGGCAGCAAGGG
GAGAAGAAGGGCGAAATCATCGGGAGCTTGACGCACAATTACCACCACCA
TCGAAAGGAGTATGCGATCAACATGCGGGCCCGCGAAGGGAAGCCCAAGG
GGATATTCAGGCGCGAGGACGGTGAGGGCCCCAGAGGTCGCGACACTATG
ACCGACGACCAGGTCTACGCGAAGTTCAAGAAGAGGAAGTACTGAATGAT
GGAGTCAAGTTTCACGGGAATGAAATACGTGACAAAGGACGATACCAACG
TCCACGAAAGAATCATGGAGCAGTACATCGAAGAAAGGCTGGGCAACGTG
AAAGAGGAGGCGCCTGAGGATACGAGAAGAGCAGAAGCAGCGCAAAGTTA
GGCTGGGCATCCAGGCGGCCTCCACCCTTGAGACCGAGCGTGCCGGGGCC
GGCGGGAGCAGGAAGGAAAGCAAAGCGGCGGCGGAGGAGGAGGAAGATGA
GGCCGAGCAACAGCGCAGCATTGGAGAGAGAACTCCGATGATGAGGAAAA
CGACAACCCGGGCATCAAGATAAAAAAACTTGTCCAGATGCGGCGTAGGA
GAGCAGTCGTCGTCCCGAGCGAGGCTGTCCCGCCCTCGAAGGTGTCGCGC
CGAGAGCAGCTTCTGGCCATCACGGAAGAGATCCATGCCCGGGCTCGCGG
CCCGGCGGGCGACAAGGCCGCCGACGCGGAGGGGGGCGTGGGGGAGGGAG
CCCCCATCGCTTTCAGCACCGGGATCGCCGAGGTGGCCCTGCCCGTGGAG
TTCAAGCTGCAGAACATTGAGGCCACTGAGCGGGCACGGCTGCTCCAAGA
AGAGCAACTCTTGCTCCGGCAGCAAGGGGAGAAGAAGGGCGAAATCATCG
GGAGCTTGACGCACAATTACCACCACCATCGAAAGGAGTATGCGATCAAC
ATGCGGGCCCGCGAAGGGAAGCCCAAGGGGATATTCAGGCGCGAGGACGG
TGAGGGCCCCAGAGGTCGCGACACTATGACCGACGACCAGGTCTACGCGA
AGTTCAAGAAGAGGAAGTACTGAATGATGGAGTCAAGTTTCACGGGAATG
AAATACGTGACAAAGGACGATACCAACGTCCACGAAAGAATCATGGAGCA
GTACATCGAAGAAAGGCTGGGCAACGTGAAAGAGGAGGCGCCTGAGGATA
CGAGAAGAGCAGAAGCAGCGCAAAGTTAGGCTGGGCATCCAGGCGGCCTC
CACCCTTGAGACCGAGCGTGCCGGGGCCGGCGGGAGCAGGAAGGAAAGCA
AAGCGGCGGCGGAGGAGGAGGAAGATGAGGCCGAGCAACAGCGCAGCATT
GGAGAGAGAACTCCGATGATGAGGAAAACGACAACCCGGGCATCAAGATA
AAAAAACTTGTCCAGATGCGGCGTAGGAGAGCAGTCGTCGTCCCGAGCGA
GGCTGTCCCGCCCTCGAAGGTGTCGCGCCGAGAGCAGCTTCTGGCCATCA
CGGAAGAGATCCATGCCCGGGCTCGCGGCCCGGCGGGCGACAAGGCCGCC
GACGCGGAGGGGGGCGTGGGGGAGGGAGCCCCCATCGCTTTCAGCACCGG
GATCGCCGAGGTGGCCCTGCCCGTGGAGTTCAAGCTGCAGAACATTGAGG
CCACTGAGCGGGCACGGCTGCTCCAAGAAGAGCAACTCTTGCTCCGGCAG
CAAGGGGAGAAGAAGGGCGAAATCATCGGGAGCTTGACGCACAATTACCA
CCACCATCGAAAGGAGTATGCGATCAACATGCGGGCCCGCGAAGGGAAGC
CCAAGGGGATATTCAGGCGCGAGGACGGTGAGGGCCCCAGAGGTCGCGAC
ACTATGACCGACGACCAGGTCTACGCGAAGTTCAAGAAGAGGAAGTACTG
AATGATGGAGTCAAGTTTCACGGGAATGAAATACGTGACAAAGGACGATA
CCAACGTCCACGAAAGAATCATGGAGCAGTACATCGAAGAAAGGCTGGGC
AACGTGAAAGAGGAGGCGCCTGAGGATACGAGAAGAGCAGAAGCAGCGCA
AAGTTAGGCTGGGCATCCAGGCGGCCTCCACCCTTGAGACCGAGCGTGCC
GGGGCCGGCGGGAGCAGGAAGGAAAGCAAAGCGGCGGCGGAGGAGGAGGA
AGATGAGGCCGAGCAACAGCGCAGCATTGGAGAGAGAACTCCGATGATGA
GGAAAACGACAACCCGGGCATCAAGATAAAAAAACTTGTCCAGATGCGGC
GTAGGAGAGCAGTCGTCGTCCCGAGCGAGGCTGTCCCGCCCTCGAAGGTG
TCGCGCCGAGAGCAGCTTCTGGCCATCACGGAAGAGATCCATGCCCGGGC
TCGCGGCCCGGCGGGCGACAAGGCCGCCGACGCGGAGGGGGGCGTGGGGG
AGGGAGCCCCCATCGCTTTCAGCACCGGGATCGCCGAGGTGGCCCTGCCC
GTGGAGTTCAAGCTGCAGAACATTGAGGCCACTGAGCGGGCACGGCTGCT
CCAAGAAGAGCAACTCTTGCTCCGGCAGCAAGGGGAGAAGAAGGGCGAAA
TCATCGGGAGCTTGACGCACAATTACCACCACCATCGAAAGGAGTATGCG
ATCAACATGCGGGCCCGCGAAGGGAAGCCCAAGGGGATATTCAGGCGCGA
GGACGGTGAGGGCCCCAGAGGTCGCGACACTATGACCGACGACCAGGTCT
ACGCGAAGTTCAAGAAGAGGAAGTACTGAATGATGGAGTCAAGTTTCACG
GGAATGAAATACGTGACAAAGGACGATACCAACGTCCACGAAAGAATCAT
GGAGCAGTACATCGAAGAAAGGCTGGGCAACGTGAAAGAGGAGGCGCCTG
AGGATACGAGAAGAGCAGAAGCAGCGCAAAGTTAGGCTGGGCATCCAGGC
GGCCTCCACCCTTGAGACCGAGCGTGCCGGGGCCGGCGGGAGCAGGAAGG
AAAGCAAAGCGGCGGCGGAGGAGGAGGAAGATGAGGCCGAGCAACAGCGC
AGCATTGGAGAGAGAACTCCGATGATGAGGAAAACGACAACCCGGGCATC
AAGATAAAAAAACTTGTCCAGATGCGGCGTAGGAGAGCAG back to top
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