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Properties
| Property Name | Value |
|---|
| Product | FAD/NAD(P)-binding oxidoreductase family protein |
| Orig transcript id | gnl|cribi|Naga_100133g5.1518.mrna |
| Orig protein id | gnl|cribi|Naga_100133g5.1518 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:215809..216803 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1814 ID=rna1814|Name=rna1814|organism=Nannochloropsis gaditana|type=mRNA|length=1122bp
CAGGGAGCCTAGATGAGAAGGAAAGAAAGCCATCGTCACCCTTCACAGTT
AATTCGTTGTTTCTTGTCGGCGTGCTGTGTGCCGCAACTCGATGGACAAT
TATCGATCAGCGCCCTCGTCTCCCGCTCCTCTTACGAAGTCGACAGTCAC
GAAAAGATCTCCTCCTGAGCTCGGTCAACTTTCTCCACACCATGTCGAGA
GAGAATCCCGTACCATCAATGCCCGGAAGCAGGTGCTTGCGGGCTCGATT
GCTGCATTTGTTTCAACGCTAGTTTGCCATCCCATCGATGTCCTGAGGAC
AGAGCTGCAGACCACGCAAGAGACTCTCACGGCCCGCGAATGCCTCCGCC
GTATTTGGCGGGCAGAAGGAATGCAGGGCTTCTATAAAGGTTTGAGTGCC
CCGCTGGCAGCACAGGCTGTCTACAAAGCCATCATTTTCGGAACCAACTC
CACGGCTCAACAGCTTCTCCTTGCCCGCACTAAGAAACGCCCCCGCCCTC
CCTCCTCCAACCTCTCGCCGCAATGCCTAAGCTACCCGGAGATCTTTCTG
TGCGGCGCCCTTTCGGGGGGAGTGAACGCCCTGGTCGTGACTCCGGTGGA
ACTGGTTCGCAACCGACTGGTTGTGTCCCACGGGGTGTATTCAGGCCCCC
GGGACTGCGTGGGGCAGGCATGGAGAGGAGGGGGGTTCCGGGGGCTGTGG
AACGGCTTGCTCCCCACCCTCTGCAGGGATGGGCCCGGCGTGGGGGCCTG
GTTTTTGGCGTTCGCGGCGGGGAAGGACGGGTTGCTGGCGTGGAAGAAAT
CGACCAAGGGCCTGAGGGGAGGGAAAAGGGAGGCGGGAGAGGAGAAGCTC
GGGGTGGGGGGGCTCCTTTTGGCGGGATCGGGGGCAGGAGTGGCCTTCTG
GACGGTGGCTTTGCCGTTTGACACGGTCAAGAGCGTGATGCAGGTGGCGG
GGGTAGGGAGCGAGGGAAAGAGGGAGGGCATGGGCCAGGTGATAGAGCGC
TTGGTTCGAGAGGGAGGGCTCCGGCGTCTCTTCCGGGGGTGGCAAGGAGC
ATTTGGGAGGGCAGTGCCTGGGTCGGCAGCGACGCTCGCGACTTTCGACG
TGGTCAAAGACTGGCTCTGAGG back to topprotein sequence of rna1814 >rna1814-protein ID=rna1814-protein|Name=rna1814|organism=Nannochloropsis gaditana|type=polypeptide|length=206bp
MGKGAVMESSSSNVLSSTPTTLSPLAQRGPLVITHTGLSGPAILRLSAFA
ARLLALLDYQASFRIDWLPEFAYPDVVQRLQRAQTANARKHVGTYCPLLT
TTAAGSVYVSRGKSIHKEEFTTAGGVALKEVDFKTFGSKRVEGLYFAGEI
LDVDGVTGGFNFMNCWSGGYIAGRSLAQRIIARDEDGKDGGREGQEGDRD
TRGLGL back to topmRNA from alignment at CM002458.1:215809..216803+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1814 ID=rna1814|Name=rna1814|organism=Nannochloropsis gaditana|type=mRNA|length=995bp|location=Sequence derived from alignment at CM002458.1:215809..216803+ (Nannochloropsis gaditana)
atggggaagggagctgtcatggagagcagcagcagcaatgtcCTATCATC
CACTCCAACCACCCTCAGCCCTCTCGCCCAACGCGGGCCGCTGGTCATCA
CGCACACCGGGCTTTCTGGTCCtgccatcctccgcctctccgccttcgct
gcccgtctccttgctctcctcgacTACCAGGCCTCCTTTCGCATCGACTG
GCTCCCCGAATTCGCATACCCGGACGTTGTCCAACGCCTGCAGCGGGCGC
AGACGGCGAATGCTCGGAAGCACGTGGGCACCTATTGTCCTCTACTGACG
ACAACGGCAGCGGGTGAGACGATTGGAGAGCCGCGCTTGCCACGTCGGCT
CTGGGCTCGGCTCGTGGCGGATgcgctggaggtggggaaggagggatgga
gggagggagggaaggagggagggaaagaagggggggccaACATGGGGCTC
TTTGTCGCCCAAGTCGCTGGGGGCCTTGGCGGACACGTTGAAAGGAAGCG
TATACGTGTCGAGGGGAAAGAGTATCCACAAGGAAGAGTTCACAACGGCC
GGGGGGGTCGCCTTGAAAGAGGTGGATTTCAAAACCTTCGGGAGCAAACG
CGTGGAAGGGCTCTATTTCGCTGGTAAGatcgagggcgggagggggggta
gggagggagggggggaatggaatGACAGACGTCGAATCCACCTGCGTCCC
CTGTGCTGAGCCTCGAGCTTGTGCGTGTCCCAGAATCGACGGTCTCTTCT
TCTAGCATGCCGCACCTTTCCCCCGAAGCCTCCTCACGTTTGTCTCCCAC
TGTCTTGCCCATGCAGGAGAGATCCTGGACGTAGACGGCGTCACAGGAGG
GTTTAATTTTATGAACTGCTGGAGCGGCGGTTACATTGCGGGAAGGAGCC
TCGCTCAAAGAATAATTGCgagggatgaggatgggaaggacggcgggagg
gagggacaggaaggcGACCGGGACACACGAGGATTAGGGTTATAA back to topCoding sequence (CDS) from alignment at CM002458.1:215809..216803+ >rna1814 ID=rna1814|Name=rna1814|organism=Nannochloropsis gaditana|type=CDS|length=1863bp|location=Sequence derived from alignment at CM002458.1:215809..216803+ (Nannochloropsis gaditana)
atggggaagggagctgtcatggagagcagcagcagcaatgtcCTATCATC
CACTCCAACCACCCTCAGCCCTCTCGCCCAACGCGGGCCGCTGGTCATCA
CGCACACCGGGCTTTCTGGTCCtgccatcctccgcctctccgccttcgct
gcccgtctccttgctctcctcgacTACCAGGCCTCCTTTCGCATCGACTG
GCTCCCCGAATTCGCATACCCGGACGTTGTCCAACGCCTGCAGCGGGCGC
AGACGGCGAATGCTCGGAAGCACGTGGGCACCTATTGTCCTCTACTGACG
ACAACGGCAGCGGGAAGCGTATACGTGTCGAGGGGAAAGAGTATCCACAA
GGAAGAGTTCACAACGGCCGGGGGGGTCGCCTTGAAAGAGGTGGATTTCA
AAACCTTCGGGAGCAAACGCGTGGAAGGGCTCTATTTCGCTGGAGAGATC
CTGGACGTAGACGGCGTCACAGGAGGGTTTAATTTTATGAACTGCTGGAG
CGGCGGTTACATTGCGGGAAGGAGCCTCGCTCAAAGAATAATTGCgaggg
atgaggatgggaaggacggcgggagggagggacaggaaggcGACCGGGAC
ACACGAGGATTAGGGTTATAAatggggaagggagctgtcatggagagcag
cagcagcaatgtcCTATCATCCACTCCAACCACCCTCAGCCCTCTCGCCC
AACGCGGGCCGCTGGTCATCACGCACACCGGGCTTTCTGGTCCtgccatc
ctccgcctctccgccttcgctgcccgtctccttgctctcctcgacTACCA
GGCCTCCTTTCGCATCGACTGGCTCCCCGAATTCGCATACCCGGACGTTG
TCCAACGCCTGCAGCGGGCGCAGACGGCGAATGCTCGGAAGCACGTGGGC
ACCTATTGTCCTCTACTGACGACAACGGCAGCGGGAAGCGTATACGTGTC
GAGGGGAAAGAGTATCCACAAGGAAGAGTTCACAACGGCCGGGGGGGTCG
CCTTGAAAGAGGTGGATTTCAAAACCTTCGGGAGCAAACGCGTGGAAGGG
CTCTATTTCGCTGGAGAGATCCTGGACGTAGACGGCGTCACAGGAGGGTT
TAATTTTATGAACTGCTGGAGCGGCGGTTACATTGCGGGAAGGAGCCTCG
CTCAAAGAATAATTGCgagggatgaggatgggaaggacggcgggagggag
ggacaggaaggcGACCGGGACACACGAGGATTAGGGTTATAAatggggaa
gggagctgtcatggagagcagcagcagcaatgtcCTATCATCCACTCCAA
CCACCCTCAGCCCTCTCGCCCAACGCGGGCCGCTGGTCATCACGCACACC
GGGCTTTCTGGTCCtgccatcctccgcctctccgccttcgctgcccgtct
ccttgctctcctcgacTACCAGGCCTCCTTTCGCATCGACTGGCTCCCCG
AATTCGCATACCCGGACGTTGTCCAACGCCTGCAGCGGGCGCAGACGGCG
AATGCTCGGAAGCACGTGGGCACCTATTGTCCTCTACTGACGACAACGGC
AGCGGGAAGCGTATACGTGTCGAGGGGAAAGAGTATCCACAAGGAAGAGT
TCACAACGGCCGGGGGGGTCGCCTTGAAAGAGGTGGATTTCAAAACCTTC
GGGAGCAAACGCGTGGAAGGGCTCTATTTCGCTGGAGAGATCCTGGACGT
AGACGGCGTCACAGGAGGGTTTAATTTTATGAACTGCTGGAGCGGCGGTT
ACATTGCGGGAAGGAGCCTCGCTCAAAGAATAATTGCgagggatgaggat
gggaaggacggcgggagggagggacaggaaggcGACCGGGACACACGAGG
ATTAGGGTTATAA back to top
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