EWM28864.1, cds1810 (CDS) Nannochloropsis gaditana

Overview
NameEWM28864.1
Unique Namecds1810
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:215809..216121 +
Alignment locationCM002458.1:216303..216431 +
Alignment locationCM002458.1:216625..216803 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28864.1
ProductFAD/NAD(P)-binding oxidoreductase family protein
Orig transcript idgnl|cribi|Naga_100133g5.1518.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:215809..216121 +
CM002458.1supercontigCM002458.1:216303..216431 +
CM002458.1supercontigCM002458.1:216625..216803 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR004792CHP00275_HI0933-like
Homology
BLAST of EWM28864.1 vs. NCBI_GenBank
Match: gi|585111291|gb|EWM28864.1| (FAD/NAD(P)-binding oxidoreductase family protein [Nannochloropsis gaditana])

HSP 1 Score: 421.009 bits (1081), Expect = 4.380e-149
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
Query:    1 MGKGAVMESSSSNVLSSTPTTLSPLAQRGPLVITHTGLSGPAILRLSAFAARLLALLDYQASFRIDWLPEFAYPDVVQRLQRAQTANARKHVGTYCPLLTTTAAGSVYVSRGKSIHKEEFTTAGGVALKEVDFKTFGSKRVEGLYFAGEILDVDGVTGGFNFMNCWSGGYIAGRSLAQRIIARDEDGKDGGREGQEGDRDTRGLGL 206
            MGKGAVMESSSSNVLSSTPTTLSPLAQRGPLVITHTGLSGPAILRLSAFAARLLALLDYQASFRIDWLPEFAYPDVVQRLQRAQTANARKHVGTYCPLLTTTAAGSVYVSRGKSIHKEEFTTAGGVALKEVDFKTFGSKRVEGLYFAGEILDVDGVTGGFNFMNCWSGGYIAGRSLAQRIIARDEDGKDGGREGQEGDRDTRGLGL
Sbjct:    1 MGKGAVMESSSSNVLSSTPTTLSPLAQRGPLVITHTGLSGPAILRLSAFAARLLALLDYQASFRIDWLPEFAYPDVVQRLQRAQTANARKHVGTYCPLLTTTAAGSVYVSRGKSIHKEEFTTAGGVALKEVDFKTFGSKRVEGLYFAGEILDVDGVTGGFNFMNCWSGGYIAGRSLAQRIIARDEDGKDGGREGQEGDRDTRGLGL 206          
BLAST of EWM28864.1 vs. NCBI_GenBank
Match: gi|971071360|ref|WP_058881547.1| (aminoacetone oxidase family FAD-binding enzyme [Oscillatoriales cyanobacterium MTP1])

HSP 1 Score: 155.221 bits (391), Expect = 6.079e-42
Identity = 80/186 (43.01%), Postives = 107/186 (57.53%), Query Frame = 0
Query:   24 PLAQRGPLVITHTGLSGPAILRLSAFAARLLALLDYQASFRIDWLPEFAYPDVVQRLQRAQTANARKHVGTYCPL--------------------------------LTTTAAGSVYVSRGKSIHKEEFTTAGGVALKEVDFKTFGSKRVEGLYFAGEILDVDGVTGGFNFMNCWSGGYIAGRSLA 177
            PL Q GP++ITH GLSGPA+L+LSA+AARLL    YQA+  I+WLP+     + Q L  A+  + ++ +  Y P                                 L        ++ RGK + KEEF T GGVALKEVDF+T  S+   GLYFAGE+LD+DGVTGGFNF + W+ G+IAG+++A
Sbjct:  223 PLEQTGPVLITHWGLSGPAVLKLSAWAARLLHDQHYQATLNINWLPQDKLDQIQQTLSAAKVQHGKRAIANYTPFPLPRRLWEYLVNRAQIPAGHRWAELSKQHLHHLIVELTRGEFLLRGKGVFKEEFVTCGGVALKEVDFRTMESRLCPGLYFAGEVLDIDGVTGGFNFQSAWTTGWIAGKAIA 408          
BLAST of EWM28864.1 vs. NCBI_GenBank
Match: gi|1194461308|gb|OUC14870.1| (flavoprotein [Alkalinema sp. CACIAM 70d])

HSP 1 Score: 154.836 bits (390), Expect = 1.252e-41
Identity = 80/186 (43.01%), Postives = 109/186 (58.60%), Query Frame = 0
Query:   25 LAQRGPLVITHTGLSGPAILRLSAFAARLLALLDYQASFRIDWLPEFAYPDVVQRLQRAQTANARKHVGTYCPLL------------------------TTTAAGSV--------YVSRGKSIHKEEFTTAGGVALKEVDFKTFGSKRVEGLYFAGEILDVDGVTGGFNFMNCWSGGYIAGRSLAQ 178
            L Q GP++ITH GLSGPA+L+LSA+ AR+L    YQA  RI+WLP      + Q L + ++  A+K +   CP++                        + TA  ++        YV  GK + KEEF T GGV LKEVDFKT  S+   GLYFAGE+LD+DGVTGGFNF + W+ G++AG+++ Q
Sbjct:  230 LEQTGPVLITHWGLSGPAVLKLSAWGARILHQTKYQAKLRINWLPSSTPEKLRQELMKVKSQLAKKTISGNCPVMLPRRLWESLVAQVGIATQTRWADCSKTAINALIQELFQGEYVVAGKGVFKEEFVTCGGVELKEVDFKTLESRVCSGLYFAGEVLDIDGVTGGFNFQSAWTTGWLAGQAMGQ 415          
BLAST of EWM28864.1 vs. NCBI_GenBank
Match: gi|1085766531|emb|SDS03388.1| (hypothetical protein SAMN05444173_1686 [Opitutus sp. GAS368])

HSP 1 Score: 154.066 bits (388), Expect = 1.617e-41
Identity = 82/190 (43.16%), Postives = 111/190 (58.42%), Query Frame = 0
Query:   25 LAQRGPLVITHTGLSGPAILRLSAFAARLLALLDYQASFRIDWLPEFAYPDVVQRLQRAQTANARKHVGTYCP----------------LLTTTAAGSV----------------YVSRGKSIHKEEFTTAGGVALKEVDFKTFGSKRVEGLYFAGEILDVDGVTGGFNFMNCWSGGYIAGRSLAQRIIA 182
            L +RGPL++TH GLSGPA+L+LSA+ AR L    Y+ +  ++W P F    +   L+RA+ AN +K +GT+CP                L   T   +V                +   GKS+ KEEF T GGV L EVDFKT  S+ V GL+FAGE++DVDG+TGGFNF   W+GG++AGR++A R  A
Sbjct:  222 LKERGPLLVTHWGLSGPAVLKLSAWGARALHDCGYRFTLLVNWAPAFNAEALRAELERARAANPKKQLGTWCPVGLPLRLWEKLLPAAGLKPDTTWATVPAAALRALAAQVGEGEFAVTGKSMFKEEFVTCGGVRLSEVDFKTMESRLVPGLHFAGEVIDVDGITGGFNFQAAWTGGWLAGRAMAGRPAA 411          
BLAST of EWM28864.1 vs. NCBI_GenBank
Match: gi|1120114588|ref|WP_072985034.1| (aminoacetone oxidase family FAD-binding enzyme [Leeuwenhoekiella palythoae] >gi|1110038989|emb|SHI26020.1| hypothetical protein SAMN04487999_3331 [Leeuwenhoekiella palythoae])

HSP 1 Score: 152.91 bits (385), Expect = 4.852e-41
Identity = 80/184 (43.48%), Postives = 109/184 (59.24%), Query Frame = 0
Query:   29 GPLVITHTGLSGPAILRLSAFAARLLALLDYQASFRIDWLPEFAYPDVVQRLQRAQTANARKHVGTYCP-----------LLTTTAAGSV---------------------YVSRGKSIHKEEFTTAGGVALKEVDFKTFGSKRVEGLYFAGEILDVDGVTGGFNFMNCWSGGYIAGRSLAQRI 180
            GP++ITH G+SGP IL+LSA+AAR L   DYQ S R+DWLPE+        L+  +   A++ V    P           +L +T + ++                     +  RGKS  KEEF TAGG+ LKE+DFKT+ +K++ GLY  GEILD+D VTGGFNF N W+GGYIA ++LAQ++
Sbjct:  234 GPVLITHWGMSGPGILKLSAWAARELHACDYQFSIRVDWLPEYDRASFGAHLRSLKFDLAKQQVFKRSPFNIPKRLWKQLVLASTISEALKWADLSKVMLQKLELQLREGQFEVRGKSTFKEEFVTAGGIDLKEIDFKTYQAKKINGLYLVGEILDIDAVTGGFNFQNAWTGGYIAAQALAQKL 417          
BLAST of EWM28864.1 vs. NCBI_GenBank
Match: gi|504202394|ref|WP_014389496.1| (aminoacetone oxidase family FAD-binding enzyme [Flavobacterium indicum] >gi|380503336|emb|CCG54378.1| Protein of unknown function [Flavobacterium indicum GPTSA100-9 = DSM 17447])

HSP 1 Score: 151.369 bits (381), Expect = 1.547e-40
Identity = 75/186 (40.32%), Postives = 106/186 (56.99%), Query Frame = 0
Query:   23 SPLAQRGPLVITHTGLSGPAILRLSAFAARLLALLDYQASFRIDWLPEFAYPDVVQRLQRAQTANARKHVGTYCPL--------------------------------LTTTAAGSVYVSRGKSIHKEEFTTAGGVALKEVDFKTFGSKRVEGLYFAGEILDVDGVTGGFNFMNCWSGGYIAGRSL 176
            S LA  GPL+ITH G+SGPAILRLSA+ AR L   +YQ S +I+WL +  + +V++ LQ  +  NA+K++  +CP                                 L      + Y   GKS  KEEF TAGG+ LKE++FK+  SK +  +YFAGE+L++D +TGGFNF N W+GG+I   ++
Sbjct:  216 SKLAASGPLLITHWGMSGPAILRLSAWGARELFDKNYQFSIQINWLKDQNFEEVMEVLQELKLENAKKNIDKFCPFALPKRLWESILMASGIQLESKWADLNKKQLVKLAEELTAASYQVNGKSTFKEEFVTAGGIDLKEINFKSMQSKLLPNVYFAGEVLNIDAITGGFNFQNAWTGGFIVAENI 401          
BLAST of EWM28864.1 vs. NCBI_GenBank
Match: gi|558899560|gb|ESU26809.1| (hypothetical protein FSS13T_09780 [Flavobacterium saliperosum S13])

HSP 1 Score: 149.443 bits (376), Expect = 4.258e-40
Identity = 75/197 (38.07%), Postives = 107/197 (54.31%), Query Frame = 0
Query:   15 LSSTPTTLSPLAQRGPLVITHTGLSGPAILRLSAFAARLLALLDYQASFRIDWLPEFAYPDVVQRLQRAQTANARKHVGTYCPL--------------------------------LTTTAAGSVYVSRGKSIHKEEFTTAGGVALKEVDFKTFGSKRVEGLYFAGEILDVDGVTGGFNFMNCWSGGYIAGRSLAQR 179
            L++     + L   GPL+ITH G+SGP ILRLSA+ AR LA  +YQ + +++WL E  + + V  L+  +  NA+K +  +CP                                 L        +   GKS  KEEF TAGG+ LKE+DFKT  SK  E LYFAGEIL++D +TGGFNF N W+GG++  +++ ++
Sbjct:  169 LATVKVKDTKLKASGPLLITHWGMSGPGILRLSAWGARELATKNYQFTLQVNWLHETDFEEAVAHLKGLKEENAKKLIMKFCPFEFPKRLWESLVTASGISAETKWADLSKKQLTDLANQLTNGQFQVNGKSTFKEEFVTAGGIHLKEIDFKTMQSKLHENLYFAGEILNIDAITGGFNFQNAWTGGFLVAKAITEK 365          
BLAST of EWM28864.1 vs. NCBI_GenBank
Match: gi|1113245848|gb|OJV11714.1| (flavoprotein [Chlamydiales bacterium 38-26])

HSP 1 Score: 149.828 bits (377), Expect = 5.979e-40
Identity = 78/184 (42.39%), Postives = 99/184 (53.80%), Query Frame = 0
Query:   25 LAQRGPLVITHTGLSGPAILRLSAFAARLLALLDYQASFRIDWLPEFAYPDVVQRLQRAQTANARKHVGTYCPL--------------------------------LTTTAAGSVYVSRGKSIHKEEFTTAGGVALKEVDFKTFGSKRVEGLYFAGEILDVDGVTGGFNFMNCWSGGYIAGRSL 176
            L Q GPL++TH G SGPA+L+LSA+ AR+L    YQA   I+WLP      +   L   +T N  K + T CP+                                L        +  +GKS  KEEF T GGV L EV+FKT  SK+  GLYFAGE+LD+DGVTGGFNF N W+ G+IAG+S+
Sbjct:  217 LKQTGPLLLTHWGFSGPAVLKLSAWGARILHDKHYQAEMCINWLPHMKIESLHHCLNAFKTQNPAKFIATECPVDLPKNLWKKFTQMAGIAPETRWSHFSKTQLNALQNILLKGTFCIKGKSTFKEEFVTCGGVHLDEVNFKTMESKKCPGLYFAGEVLDIDGVTGGFNFQNAWTTGWIAGQSM 400          
BLAST of EWM28864.1 vs. NCBI_GenBank
Match: gi|737685204|ref|WP_035654268.1| (aminoacetone oxidase family FAD-binding enzyme [Flavobacterium saliperosum] >gi|1081446847|emb|SCX13141.1| hypothetical protein SAMN02927925_01910 [Flavobacterium saliperosum])

HSP 1 Score: 149.828 bits (377), Expect = 7.318e-40
Identity = 75/197 (38.07%), Postives = 107/197 (54.31%), Query Frame = 0
Query:   15 LSSTPTTLSPLAQRGPLVITHTGLSGPAILRLSAFAARLLALLDYQASFRIDWLPEFAYPDVVQRLQRAQTANARKHVGTYCPL--------------------------------LTTTAAGSVYVSRGKSIHKEEFTTAGGVALKEVDFKTFGSKRVEGLYFAGEILDVDGVTGGFNFMNCWSGGYIAGRSLAQR 179
            L++     + L   GPL+ITH G+SGP ILRLSA+ AR LA  +YQ + +++WL E  + + V  L+  +  NA+K +  +CP                                 L        +   GKS  KEEF TAGG+ LKE+DFKT  SK  E LYFAGEIL++D +TGGFNF N W+GG++  +++ ++
Sbjct:  209 LATVKVKDTKLKASGPLLITHWGMSGPGILRLSAWGARELATKNYQFTLQVNWLHETDFEEAVAHLKGLKEENAKKLIMKFCPFEFPKRLWESLVTASGISAETKWADLSKKQLTDLANQLTNGQFQVNGKSTFKEEFVTAGGIHLKEIDFKTMQSKLHENLYFAGEILNIDAITGGFNFQNAWTGGFLVAKAITEK 405          
BLAST of EWM28864.1 vs. NCBI_GenBank
Match: gi|496280526|ref|WP_008992564.1| (aminoacetone oxidase family FAD-binding enzyme [Galbibacter marinus] >gi|407742625|gb|EKF54218.1| hypothetical protein I215_13632 [Galbibacter marinus])

HSP 1 Score: 149.828 bits (377), Expect = 7.566e-40
Identity = 75/184 (40.76%), Postives = 105/184 (57.07%), Query Frame = 0
Query:   29 GPLVITHTGLSGPAILRLSAFAARLLALLDYQASFRIDWLPEFAYPDVVQRLQRAQTANARKHVGTYCPL-------LTTTAAGSV-------------------------YVSRGKSIHKEEFTTAGGVALKEVDFKTFGSKRVEGLYFAGEILDVDGVTGGFNFMNCWSGGYIAGRSLAQRI 180
            GPL+ITH G+SGPAIL+LSA+ AR L  L+YQ    ++WLP++ + D+   L   +  +A+KH+    P        L    A SV                         +   GKS  KEEF TAGGV LKE++FKT+ SK  E LY AGE+LD+D +TGGFNF N W+GG+I   ++++++
Sbjct:  235 GPLLITHWGMSGPAILKLSAWGARALHQLNYQFKILVNWLPQYNFEDMAMHLTELKQEHAKKHIVNTRPFELPKRLWLKLLEAVSVSKEMKWADMSKVQLRNLARQLTQAQFTVNGKSTFKEEFVTAGGVDLKEINFKTYQSKVCESLYLAGEVLDIDAITGGFNFQNAWTGGFIIANAISEKL 418          
The following BLAST results are available for this feature:
BLAST of EWM28864.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111291|gb|EWM28864.1|4.380e-149100.00FAD/NAD(P)-binding oxidoreductase family protein [... [more]
gi|971071360|ref|WP_058881547.1|6.079e-4243.01aminoacetone oxidase family FAD-binding enzyme [Os... [more]
gi|1194461308|gb|OUC14870.1|1.252e-4143.01flavoprotein [Alkalinema sp. CACIAM 70d][more]
gi|1085766531|emb|SDS03388.1|1.617e-4143.16hypothetical protein SAMN05444173_1686 [Opitutus s... [more]
gi|1120114588|ref|WP_072985034.1|4.852e-4143.48aminoacetone oxidase family FAD-binding enzyme [Le... [more]
gi|504202394|ref|WP_014389496.1|1.547e-4040.32aminoacetone oxidase family FAD-binding enzyme [Fl... [more]
gi|558899560|gb|ESU26809.1|4.258e-4038.07hypothetical protein FSS13T_09780 [Flavobacterium ... [more]
gi|1113245848|gb|OJV11714.1|5.979e-4042.39flavoprotein [Chlamydiales bacterium 38-26][more]
gi|737685204|ref|WP_035654268.1|7.318e-4038.07aminoacetone oxidase family FAD-binding enzyme [Fl... [more]
gi|496280526|ref|WP_008992564.1|7.566e-4040.76aminoacetone oxidase family FAD-binding enzyme [Ga... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1814rna1814Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications