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Properties
| Property Name | Value |
|---|
| Product | acyl-coenzyme a thioesterase 13 |
| Orig transcript id | gnl|cribi|Naga_100095g12.10165.mrna |
| Orig protein id | gnl|cribi|Naga_100095g12.10165 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:192432..193986 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1803 ID=rna1803|Name=rna1803|organism=Nannochloropsis gaditana|type=mRNA|length=4254bp
ATGTTGAAGTGTACAAAGAATACAAGTAACGCGTGTCAAATCTTTATAAA
AACAAGGGCTGCGACCAGGATCGCATTGGATCGCTCTCTGCAGGAGCAGC
CTTACTTGAGGCAGGGTAGGAATTGCAGTGCAGCCCATCCTAGTGCGATT
CGAGCTATTCAAGGCGAGAGGTATAATCAAAACACCATGCATCCATCCAA
TCTTCAGCCTGGCCTCGCCTCCTCCATGGCAATTTCATCCGCCTCCTCCC
ATGGCCGTAGAAGACAGCGCGTTGCTGTAGCTTCATCTCTCCTAGTTCTC
GCCGCTGCTGCTGTGTCGACGAGCACAACTCAAGCATTCATCCTGCCAAT
TCCTCCCTCTGCGAAATCTTCTCCTTCCTTCTCGTCTTCTGCCCCGCGCT
TTGCTCGTCCTAATGCCGTGGTATCGGGGAAGAGGGTCCTTCGCATGGCT
ACTACTTTAACCGATGCGAGCAGCAGCGACGTGATCTCTCCCGCGGAGCT
TGACGTGGTTAGACCGGTCCCCACGCGCCACGACCGAGAAACTGGTCGCG
ACCCCATGCGTGTCAAAATATTCGACACGACGCTCCGCGACGGCGAGCAA
AGCCCCGGGTGCACCATGACGGCGGAAGAAAAACTGCAGGTAGCAAAACA
GCTTGCCAAGCTAGGGGTAGACGTGATCGAGGCCGGTTTTCCCATCGCCA
GTACCGGAGACTTCGATGCGGTCCGGCGGATCGCGGAATCGGTCGGTAAC
ATGGAGAACCCCCCCATTATTTGCGGTCTGGCGCGCGCTTTGAAAAAGGA
CATTGAGACCTGCTGGAACGCGGTCAAGTACGCCGCCTTTCCACGTATTC
ACACCTTCATCGCCACCAGCGACATCCACATGCTCCACAAGCTCAAGAAA
AGCCGAGAGGAGGTGTTGGGTATCACGCGGGAGATGGTCACCTATGCCCG
GTCTCTGTGTGAGGACGTGGAATTCTCCGCGGAAGACGCCCTTCGCTCCG
ACCCCGCGTTTCTTTACCAAGTGTACTCGGTGGCGGTGGAGGCGGGCGCT
ACTACCTTGAATGTCCCGGACACAGTGGGGTACACCACGCCCAGTGAATT
CAAAGCCTTGATTCGCGGCCTCCGCGCCAACGTCAAGGGCGTGGAGGGGG
TGACCATCTCCGTCCACGGCCACGACGACTTGGGCATGGCCGTGGCGAAT
TTCATGGCGGCCATCAGGGGGGGGGCTCGACAGGTCGAGTGCACCATCAA
CGGTATCGGAGAGCGGGCGGGCAATGCGGCCTTGGAGGAGATTGTCATGG
CCTTGCACGTCCGCAAGTCCTTCTACAACCCTCGGTTCGGCCGAGCACCC
GAGGACGAGATGGCCCTGACCAACATTCAAACGACGGAAATCTGGAAAAC
CTCGCGCCTCGTATCTACCCTGACGGGCATGGTAATTCAACCCAACAAAG
CGATCGTGGGAGCCAACGCATTTGCCCATGAGAGCGGGATTCACCAGGAC
GGCATCCTGAAGAACAAATCCACGTACGAAATCATGGACGCCGAGTCGAT
TGGTCTCGCGAAAAACGGCCTTGTGCTGGGGAAACACTCTGGGCGTCACG
CCTTTCGGTCTCGCCTGACGGAACTTGGCTACGAGGCGCTGAGCGACGCC
GAGCTGAACAAGGCTTTCGTGCGTTTCAAGGAAGTGGCTGACAAGAAGAA
GGAAATTACTAATTTGGACTTGGAATCGATCGTGAACGAGGAGATGCGCC
TTGGGTACGACGCGGGGAAGTATGAGCTCTTGCGCTGCCAGGTGATATGC
GGGGACAGTCAAGTTCCTACTGCTACCATCACCCTTTTGAACAAGGAGGA
CAATCAGGAGGTCACGGTCGCGGCCACGGGCACAGGTCCCGTGGACGCGG
CTTACGTGGCCGTGACCAAGGCATTGGGCATCGAGAAAATCAAGCTCCTG
GAGTTTGTCGTCTCCTCGGTGACCGCGGGAATCGATGCGTTGGGCGAAGT
GACCGTACGTCTAGAGGATTTGTCCAGCGGAAAGATCTACTACGGGCGCA
GTGCCAATACGGACGTGGTCTCAGCCGGGGTTCTCTTCCTGTCCACCCTC
AGTTTGGGAAGATTTGATCTCCAAGAGGATCGAGTTGTCTGGCAGGATGG
AAAAGAATGTTGTGTGAGGCGCGTTGTGTCGTCTTTTAGGTCATCCTGGA
GGCATACATGGATCACCACGCTTTACGAAAAGGCATTCAGGGACTACGGA
TATGTTAAAAAAACGCGCGCCCGATGGAAGCTGCCGATGAAAGAAACAAT
ACGGAGTCACCCGCATGTTCGTGGAAAATATCGAGATAGGCTTAGTATGC
CTTCTATTGACGAGGAGCATGCAGTACACACGGCTCTTGTTCCGCCCACT
TCAGCTGAGGTATCCATCCCCAGTGCCGGGGCTGCGTCTACAGCCCATCC
CTCTTCCACGGAGGCCATGCGGTCATTACAAGAGCTAGAAGCCGACGATA
CAGAGTACAGCCAGACACACACACACCCACGGCCCGGACACGACCACGAA
AAGCCGCCAACGGCTGGAATTTTGTCATTTCTTTATGCTTTTGAAGGCGG
GGACCCCGACAGTGAGGTGGACGTAGTTCACGCATTTCAGGAAGAAGGAG
GGGTGCCGGAAAGAAAGCCACCAGTCTTTAGCTTTCGTACTTTATTGTCA
TACACCGGGCCTGGATTCCTAATGTGTATAGCTTATTTAGACCCCGGAAA
TTTGGAGGCCGATCTGCAAGTTGGAGCGTATACAGGGTATGACTTGCTGT
GGATGCTGGCATTGGCCACCTTTATGGGATTTGCTTTGCAATGTATGGCT
GTACGTCTAGGCGTGGTGACAGGCAAAAACTTGGCGCGGGTCTGTAAGGA
GCAGTACAACCGGGCCACGTCGATGACGCTTTGGATACTAATAGAGCTGG
CCATCGTCGGCTGCGACCTCCAAGAGATTGTCGGCAGTGCGATCGCCTTT
CAGATCCTTTTCGGCTTCCCCCTGTGGCTCGGGTGCCTCATCACTTTCAT
CGACACCTTCACTTTCCTTGGCATCCACTATTTCGGGGTCCGAAAACTGG
AAAGTGTCTTCGTGCTCTTGGTGGCGATCATGACCGTGTGCTTTTTCATC
AATTTTGGAAAGAGCCCCCCCCCTTCGAGGGATATCGCGGAAGGCTTCGT
GCCTCAGATACGGCCCTACGCAGTCTTGTCGGCCGTGGGACTGATCGGTG
CCGTCATCATGCCTCACAACATCTACCTCCATTCCGCCCTCGTCCTCTCT
CGAAAAGTGGACCGGCGCCGGCCCGCCCACGTCAAAGAAGCGAACAAGTA
CTTTGCCATCGACTCAGCCATAGCCTTGACCGTCTCCTTCGTGATCAATC
TGGCGGTGGTCTCCGTCTTTGCCTACCATTTCTTCGACCACGGTTGTGCC
ACCGCCCCGGGGGGGCCTTTGGCCTGCTTGAGTCGAACCGAGGAAGGTGT
CTGTGATTGCCAGTTGATTGGCCTGGCGGGGGCGCATGACGCATTGGCCG
AAGCCCTGGGGAAATCCGCGAAATACATCTGGGCGGTGGGTTTATTGGCC
GCAGGGCAAGCGAGCACCATGACAGGTACTTACGCAGGTCAATATGTGAT
GGAAGGCTTTTTGGATTTGCAGATCCCCCTCTGGGCCCGAGTGACGTTCA
CCCGATTCGTGGCCATCGGTCCGGGCCTGGTCGTGGCGATATTGACGGAG
AACAACCAAAACCTCTCCGACCGGTTCCAGGAAGCGATCAATGTGTTCAA
CTCCGTCCTTCTATCCTTCTCCCTCCTGCCTGTGCTCCATTTCACCTCCT
CCTCCGTGATCATGGGCGAGCACGTGTCCTCCCTCCCCCTCACGATCACG
ATCTGGGTGCTCGCTTTCGGGGTCCTCGCCATCAACATCTACTTGGTCGT
GCTCCGGATCGGGGCAGGACAGCCCTGGTGGGTGTATGTGGTGACCGCCG
TGGTAGGTTTGATTTACTTGGCATTTTCCTACTCCCTGGTCCAAGAGGAC
ATCGAGAACGGGGCGTGGGCGGTCGTGGAGGGCCTGCCGGTTGGGTGGCC
GTTGAAGAGACGGTTGCTGGCCTGGCGGGAGCGAAGGAAGGTGAGGAAAG
AAGGGTTGATTGGCGGAGATGGGATCTCGAACGTGTCGCCGAAGCACCAA
AGATTGATAGAATCGGTGGGTGACAGCGATGGAAGCGAGCCCGAGTCCAC
ATAG back to topprotein sequence of rna1803 >rna1803-protein ID=rna1803-protein|Name=rna1803|organism=Nannochloropsis gaditana|type=polypeptide|length=422bp
MSLKTISPHDYRSKMTRQERTSRQVLELLHAVSKSAFSGVLLRRDIEPNA
TELQNVKALKIGPGPQVRLRLRVPSHLCDNYNNNHRLLDAGAVTAWFDEV
SSWAFVSADGRHRPGVSVSLNTTVLSWVPVGTEVEIQSHCKKIGETLGFA
DMMLLDVATGKELAHGRHVKFLKMGTAWTVAMHAWAFPLTYLMASAVLLP
SVRQRTQKSSSFPPEMAPSPDLPRTEPGSAVNINRLLALDNFHVYEPAGA
ASPPLAFPASVPLTMEASASFRVIPQVCNSFGSLHGGAAAILAERAALAL
YHQAARWAGERSQHALPRVRSLSIDYMSPCKKNTELLLLVRGMRVERGAG
EGDKHSPSRSLFPPLDVAPHPQGNLIPMSYQVLFTRKKDGRYLTQCHVLL
DSQGDAWHHQRQSRGEGNRARL back to topmRNA from alignment at CM002458.1:192432..193986- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1803 ID=rna1803|Name=rna1803|organism=Nannochloropsis gaditana|type=mRNA|length=1555bp|location=Sequence derived from alignment at CM002458.1:192432..193986- (Nannochloropsis gaditana)
ATGTCCCTCAAAACAATCTCACCGCATGATTATAGGTCAAAAATGACCCG
ACAAGAACGAACAAGTCGCCAAGTGCTTGAGCTTTTGCATGCAGTGTCGA
AAAGTGCTTTTTCTGGCGTCCTTTTGCGCAGAGATATCGAACCCAACGCC
ACAGAGCTTCAAAATGTCAAAGCCCTAAAAATAGGACCCGGGCCACAAGT
TCGCCTTCGACTACGCGTGCCCTCCCACCTGTGTGATAATTACAATAATA
ATCATCGTTTGTTGGACGCAGGCGCCGTCACGGCGTGGTTTGACGAAGTC
TCCTCGTGGGCGTTTGTGTCCGCGGACGGACGGCATCGACCCGGTGTAAG
CGTCAGTTTGAACACGACCGTGCTCTCCTGGGTGCCTGTGGGAACGGAAG
TGGAGATTCAATCGCATTGTAAAAAAATAGGGGAGACATTGGGTTTTGCC
GACATGATGCTTCTGGACGTAGCAACGGGTAAAGAGGTGCGTACAGAGTT
GGGGGAAAGGACGCGAGAAGACTCACGTCTCGGCTCATATGAGTACGGAG
TTTGGGAATATCTGGATATCGTACGCTACGCACCTTGTTTGTATCGTTAG
ATTTTTTTCGTGTCCTTACTTTCTGACCTCCGTTATCGTCCACGACCTTC
ACTGCTATCCTTCAGCTCGCTCACGGTCGACACGTCAAGTTCTTGAAAAT
GGGCACCGCTTGGACGGTGGCCATGCATGCCTGGGCCTTCCCGCTCACGT
ACCTGATGGCCTCCGCCGTCCTTCTACCTAGCGTGCGCCAAAGGACGCAG
AAAAGCTCTTCTTTTCCACCTGAGATGGCACCTTCACCCGACCTGCCGAG
AACGGAACCAGGATCCGCCGGTACGCACAGGATGGGGGCGGTATTCGGCG
CGTTCCAGGCATATTTTTCGCATCCATATTCACTCACTTCCCTCCCGTGA
CTCTTTTTTACCATTCACGTCCCGTAGTAAACATAAACCGTCTCCTGGCG
CTGGATAATTTCCATGTGTACGAGCCTGCAGGAGCCGCTTCCCCTCCTTT
GGCGTTTCCGGCGTCCGTGCCTCTAACAATGGAAGCGTCGGCTTCTTTCA
GAGTCATTCCGCAGGTTTGCAATAGCTTCGGTTCTCTCCATGGTGGGGCC
GCCGCAATTTTGGCTGAGCGCGCTGCTCTTGCCTTGTATCACCAAGCCGC
TCGGTGGGCCGGAGAGAGGAGCCAGCACGCTTTGCCGCGTGTTCGTTCTT
TGAGTATCGATTACATGTCTCCATGCAAGAAAAATACGGAATTGCTTCTG
CTCGTGCGAGGAATGCGTGTGGAACGTGGAGCTGGGGAGGGAGACAAACA
TTCTCCCTCCCGAAGCTTGTTTCCTCCTTTAGATGTGGCACCCCATCCCC
AGGGAAACCTTATACCGATGTCCTATCAGGTGTTGTTTACACGCAAGAAG
GACGGGCGGTATCTGACGCAATGCCACGTTTTATTGGATTCTCAAGGCGA
CGCCTGGCATCATCAACGACAAAGCAGAGGTGAAGGGAACAGGGCCCGCT
TGTGA back to topCoding sequence (CDS) from alignment at CM002458.1:192432..193986- >rna1803 ID=rna1803|Name=rna1803|organism=Nannochloropsis gaditana|type=CDS|length=3807bp|location=Sequence derived from alignment at CM002458.1:192432..193986- (Nannochloropsis gaditana)
TAAACATAAACCGTCTCCTGGCGCTGGATAATTTCCATGTGTACGAGCCT
GCAGGAGCCGCTTCCCCTCCTTTGGCGTTTCCGGCGTCCGTGCCTCTAAC
AATGGAAGCGTCGGCTTCTTTCAGAGTCATTCCGCAGGTTTGCAATAGCT
TCGGTTCTCTCCATGGTGGGGCCGCCGCAATTTTGGCTGAGCGCGCTGCT
CTTGCCTTGTATCACCAAGCCGCTCGGTGGGCCGGAGAGAGGAGCCAGCA
CGCTTTGCCGCGTGTTCGTTCTTTGAGTATCGATTACATGTCTCCATGCA
AGAAAAATACGGAATTGCTTCTGCTCGTGCGAGGAATGCGTGTGGAACGT
GGAGCTGGGGAGGGAGACAAACATTCTCCCTCCCGAAGCTTGTTTCCTCC
TTTAGATGTGGCACCCCATCCCCAGGGAAACCTTATACCGATGTCCTATC
AGGTGTTGTTTACACGCAAGAAGGACGGGCGGTATCTGACGCAATGCCAC
GTTTTATTGGATTCTCAAGGCGACGCCTGGCATCATCAACGACAAAGCAG
AGGTGAAGGGAACAGGGCCCGCTTGTGACTCGCTCACGGTCGACACGTCA
AGTTCTTGAAAATGGGCACCGCTTGGACGGTGGCCATGCATGCCTGGGCC
TTCCCGCTCACGTACCTGATGGCCTCCGCCGTCCTTCTACCTAGCGTGCG
CCAAAGGACGCAGAAAAGCTCTTCTTTTCCACCTGAGATGGCACCTTCAC
CCGACCTGCCGAGAACGGAACCAGGATCCGCCGATGTCCCTCAAAACAAT
CTCACCGCATGATTATAGGTCAAAAATGACCCGACAAGAACGAACAAGTC
GCCAAGTGCTTGAGCTTTTGCATGCAGTGTCGAAAAGTGCTTTTTCTGGC
GTCCTTTTGCGCAGAGATATCGAACCCAACGCCACAGAGCTTCAAAATGT
CAAAGCCCTAAAAATAGGACCCGGGCCACAAGTTCGCCTTCGACTACGCG
TGCCCTCCCACCTGTGTGATAATTACAATAATAATCATCGTTTGTTGGAC
GCAGGCGCCGTCACGGCGTGGTTTGACGAAGTCTCCTCGTGGGCGTTTGT
GTCCGCGGACGGACGGCATCGACCCGGTGTAAGCGTCAGTTTGAACACGA
CCGTGCTCTCCTGGGTGCCTGTGGGAACGGAAGTGGAGATTCAATCGCAT
TGTAAAAAAATAGGGGAGACATTGGGTTTTGCCGACATGATGCTTCTGGA
CGTAGCAACGGGTAAAGAGTAAACATAAACCGTCTCCTGGCGCTGGATAA
TTTCCATGTGTACGAGCCTGCAGGAGCCGCTTCCCCTCCTTTGGCGTTTC
CGGCGTCCGTGCCTCTAACAATGGAAGCGTCGGCTTCTTTCAGAGTCATT
CCGCAGGTTTGCAATAGCTTCGGTTCTCTCCATGGTGGGGCCGCCGCAAT
TTTGGCTGAGCGCGCTGCTCTTGCCTTGTATCACCAAGCCGCTCGGTGGG
CCGGAGAGAGGAGCCAGCACGCTTTGCCGCGTGTTCGTTCTTTGAGTATC
GATTACATGTCTCCATGCAAGAAAAATACGGAATTGCTTCTGCTCGTGCG
AGGAATGCGTGTGGAACGTGGAGCTGGGGAGGGAGACAAACATTCTCCCT
CCCGAAGCTTGTTTCCTCCTTTAGATGTGGCACCCCATCCCCAGGGAAAC
CTTATACCGATGTCCTATCAGGTGTTGTTTACACGCAAGAAGGACGGGCG
GTATCTGACGCAATGCCACGTTTTATTGGATTCTCAAGGCGACGCCTGGC
ATCATCAACGACAAAGCAGAGGTGAAGGGAACAGGGCCCGCTTGTGACTC
GCTCACGGTCGACACGTCAAGTTCTTGAAAATGGGCACCGCTTGGACGGT
GGCCATGCATGCCTGGGCCTTCCCGCTCACGTACCTGATGGCCTCCGCCG
TCCTTCTACCTAGCGTGCGCCAAAGGACGCAGAAAAGCTCTTCTTTTCCA
CCTGAGATGGCACCTTCACCCGACCTGCCGAGAACGGAACCAGGATCCGC
CGATGTCCCTCAAAACAATCTCACCGCATGATTATAGGTCAAAAATGACC
CGACAAGAACGAACAAGTCGCCAAGTGCTTGAGCTTTTGCATGCAGTGTC
GAAAAGTGCTTTTTCTGGCGTCCTTTTGCGCAGAGATATCGAACCCAACG
CCACAGAGCTTCAAAATGTCAAAGCCCTAAAAATAGGACCCGGGCCACAA
GTTCGCCTTCGACTACGCGTGCCCTCCCACCTGTGTGATAATTACAATAA
TAATCATCGTTTGTTGGACGCAGGCGCCGTCACGGCGTGGTTTGACGAAG
TCTCCTCGTGGGCGTTTGTGTCCGCGGACGGACGGCATCGACCCGGTGTA
AGCGTCAGTTTGAACACGACCGTGCTCTCCTGGGTGCCTGTGGGAACGGA
AGTGGAGATTCAATCGCATTGTAAAAAAATAGGGGAGACATTGGGTTTTG
CCGACATGATGCTTCTGGACGTAGCAACGGGTAAAGAGTAAACATAAACC
GTCTCCTGGCGCTGGATAATTTCCATGTGTACGAGCCTGCAGGAGCCGCT
TCCCCTCCTTTGGCGTTTCCGGCGTCCGTGCCTCTAACAATGGAAGCGTC
GGCTTCTTTCAGAGTCATTCCGCAGGTTTGCAATAGCTTCGGTTCTCTCC
ATGGTGGGGCCGCCGCAATTTTGGCTGAGCGCGCTGCTCTTGCCTTGTAT
CACCAAGCCGCTCGGTGGGCCGGAGAGAGGAGCCAGCACGCTTTGCCGCG
TGTTCGTTCTTTGAGTATCGATTACATGTCTCCATGCAAGAAAAATACGG
AATTGCTTCTGCTCGTGCGAGGAATGCGTGTGGAACGTGGAGCTGGGGAG
GGAGACAAACATTCTCCCTCCCGAAGCTTGTTTCCTCCTTTAGATGTGGC
ACCCCATCCCCAGGGAAACCTTATACCGATGTCCTATCAGGTGTTGTTTA
CACGCAAGAAGGACGGGCGGTATCTGACGCAATGCCACGTTTTATTGGAT
TCTCAAGGCGACGCCTGGCATCATCAACGACAAAGCAGAGGTGAAGGGAA
CAGGGCCCGCTTGTGACTCGCTCACGGTCGACACGTCAAGTTCTTGAAAA
TGGGCACCGCTTGGACGGTGGCCATGCATGCCTGGGCCTTCCCGCTCACG
TACCTGATGGCCTCCGCCGTCCTTCTACCTAGCGTGCGCCAAAGGACGCA
GAAAAGCTCTTCTTTTCCACCTGAGATGGCACCTTCACCCGACCTGCCGA
GAACGGAACCAGGATCCGCCGATGTCCCTCAAAACAATCTCACCGCATGA
TTATAGGTCAAAAATGACCCGACAAGAACGAACAAGTCGCCAAGTGCTTG
AGCTTTTGCATGCAGTGTCGAAAAGTGCTTTTTCTGGCGTCCTTTTGCGC
AGAGATATCGAACCCAACGCCACAGAGCTTCAAAATGTCAAAGCCCTAAA
AATAGGACCCGGGCCACAAGTTCGCCTTCGACTACGCGTGCCCTCCCACC
TGTGTGATAATTACAATAATAATCATCGTTTGTTGGACGCAGGCGCCGTC
ACGGCGTGGTTTGACGAAGTCTCCTCGTGGGCGTTTGTGTCCGCGGACGG
ACGGCATCGACCCGGTGTAAGCGTCAGTTTGAACACGACCGTGCTCTCCT
GGGTGCCTGTGGGAACGGAAGTGGAGATTCAATCGCATTGTAAAAAAATA
GGGGAGACATTGGGTTTTGCCGACATGATGCTTCTGGACGTAGCAACGGG
TAAAGAG back to top
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