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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100095g9.10175.mrna |
| Orig protein id | gnl|cribi|Naga_100095g9.10175 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:180682..183607 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1801 ID=rna1801|Name=rna1801|organism=Nannochloropsis gaditana|type=mRNA|length=975bp
ATGCGACCAGCCTTCCACTCGCACAGGGCTGACCTGTTCGAAACCGCGCC
GGGTGATCGAGGAGAACTCCTCGTGCTGTGCGCTGCTTGTGTGGGGACAA
GTGGTGTATGTCAGAGACTGTTCACTTCTTCGGCACATTTTCCACCCTAC
CCTTCCCCTCAGGTACACAGCCACCGTCGACGGACCTTCGCGGCTGCTTT
TATCATGGCATCTGTGATTTCATCCCCTAAAAAGGAGGCATCAGTCATGA
GTGAACCCTCTACATTTCCTGATGGACCCGGTCGGGCTTCACCTGGTTTA
GCACTGCCTCGCCTTCGCATGTCCGTGTCCGACACGCCCGGCATCCTCTG
TCGTCCTCTATTGCTTCCGTCCATCTCGAATCAGCTCAACATGGAGGACG
CTAGTAAAAACACGCTTTCGAATAAGACATGGCAAACCTCCTTAACAGAG
GAGGAACGGGAAGTCGTTCGATTGAAAATCATGGCAGCGTACAAACGTCA
GGCAAAAACTTACGAAGATGTCTTGAATGTGGCCGCAGCTCTTCAAGAGG
AGGAATGTTTCGGCCGAGCCCCCTCGCGATTAGACTACATCAAAGACACG
GTGCAATTTAGTCATCGACTGGGTGAGGCAAAGAAAAAACTGGTGAGCGG
AAGAGGAAAGGGAAGCGGTGCAGAAAAGCAGGCGGAGGTGAAAGAGAAGG
AGCCTACGCATTCTGATACAGGCGGGACACGAAAAAGGGGACGTTCAGAG
GCTGTGGAAATAAATACTGTGAGTGACAAGCAGATCAAGGAAGGTCATGG
GGCAGGTGAGGGGGAAAACAGCAAGAAGAAGAGGGGAGAAAAGGGGCAAA
CACGTGGGAGGGAGCAGGATCCATGCACACGTTTGGAAGGAGGAAGCAAT
ACATCAGCAAAATTCACAATGAATGCAGCAGGGTGCAGGGGAAAGATATC
AGAGCAGCCAAAGGGAAAAGAATAA back to topprotein sequence of rna1801 >rna1801-protein ID=rna1801-protein|Name=rna1801|organism=Nannochloropsis gaditana|type=polypeptide|length=663bp
MERDTQSISQDNARHCMICLGCPSTSTPPDKAVALSTADLSAESSPFLQC
PIDGRIICHSKCLEDLVLFNVAPERLRAYHGLVPCPWIDASALRESPCSH
RWQYRDLVKHLSFEMQIKYTEEMTAFIRTLLGNPSESARETDTLVNENKE
KKALTMEDPDDPRVLSAAAHIKENILNLRCPQCMAVFYDFDACCAVTCRA
CGISFCGLCMMPPGGKSKKDGNMEGSDRTKEAAHAHVIAVHGRLFMQEEE
ILRQQNVFRQHRLVHYLVSLAVSPSLPPSLPPFSSLPLAPSLSTDASLPQ
DDARLTAPGMDIRAERSEGEAAGEEVRRAAEVALVGVPQPALMERVLFQV
ARECNDVGLDVNEIRRKAHEALRGPNEGMAGGKQDREGPTPSEGGREREH
NDLLGLGRFHQLRLSPSPVFRREMTRDFAPVRFPVGGTQVRPCGPGRGAR
EVEVEGGRQGGLESTLTGGEVAGREKGLAVSHTRRPSRLHVEELRLEGGR
EGRKEGGREGGREGGRAGARTGAGFCRVATPIPRLADGVARNGYDASFTR
TCLSGLSTRLETGAEGGTASAAPSFLPPGNGPSPCGMEGGRERGKKGRAW
EEDGDEDGSHGWRRCRPRTFSFQSCSPVMTALASPYLHPISTGPSTGTSS
SPSFSDFVLRGSR back to topmRNA from alignment at CM002458.1:180682..183607+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1801 ID=rna1801|Name=rna1801|organism=Nannochloropsis gaditana|type=mRNA|length=2926bp|location=Sequence derived from alignment at CM002458.1:180682..183607+ (Nannochloropsis gaditana)
TGCTGCTGCTCAATTCACCCACCCCACGAAATACCAGCGTTATTTTAAAT
CCGTCGTATGTATCACACAACTATGCAATGTAATAAAGAAGTTAAGTTGA
AGTCCAGTTGTTTTGTGCATTATTTGACCCAAGCAGGTTCCATTACGGGC
TTCGACACTCACCAGAGGAAACAGCACAAGCAGCAGGGAGCTAGGTAATA
GTATAGTCCAGAAATTCGAGACCACTTCGACGACAACCTCTCAAACTATC
tgtgagggatggagagagacACACAAAGCATTTCTCAAGATAATGCACGG
CATTGCATGATATGTCTGGGCTGCCCATCTACTTCAACACCTCCTGACAA
GGCAGTAGCTTTGTCGACTGCGGATCTTTCCGCTGAGAGCTCTCCATTTC
TTCAATGTCCGATTGATGGTCGAATAATATGCCATAGTAAATGTTTGGAG
GATTTGGTGCTGTTCAATGTCGCGCCGGAACGCTTGCGAGCCTACCACGG
GCTGGTACCTTGCCCATGGATCGACGCCTCTGCGCTTCGAGAAAGCCCAT
GCTCTCACCGTTGGCAATACCGAGACCTGGTCAAACATTTATCATTTGAA
ATGCAAATCAAGTACACAGAGGAAATGACGGCATTCATTCGTACGTTGCT
GGGCAATCCAAGTGAAAGTGCTCGGGAGACGGACACCCTCGTAAACGAGA
AcaaagagaaaaaggcgTTGACAATGGAGGATCCAGACGATCCCCGTGTG
CTCTCAGCAGCGGCACACATCAAGGAAAATATACTCAACCTCAGATGTCC
TCAGTGCATGGCTGTCTTCTACGATTTTGACGCCTGCTGCGCGGTGACGT
GTCGTGCGTGTGGGATTTCCTTTTGCGGGCTGTGCATGATGCCACCGGGC
GGCAAGAGTAAGAAGGATGGGAATATGGAAGGAAGCGAtaggacgaagga
ggcagcGCATGCCCACGTCATCGCTGTGCACGGTCGCCTCTTCatgcaag
aagaggaaattcTCCGGCAGCAAAACGTGTTTCGCCAGCACCGGCTCGTC
CACTACCTGGTGTCTCTGGCggtttccccctccctccctccctccctccc
tcccttctcttctcttccccttgctccttcgcTGTCCACCgacgcctccc
tgccccaggATGACGCCAGGCTCACAGCTCCGGGCATGGACATCCGCGCA
GAGAGAAGCGAAGGCGAAGCAGCAGGCGAGGAGGTACGGCGGGCTGCTGA
GGTCGCACTCGTCGGGGTACCGCAGCCAGCCCTAATGGAAAGGGTACTCT
TCCAGGTCGCGCGTGAATGCAACGATGTAGGGCTGGACGTGAACGAAATC
CGCAGGAAGGCTCACGAAGCACTCCGGGGGCCAAACGAGGGAATGGCCGG
GGGGAAACAAGATAGAGAGGGCCCGACGccgtcggagggagggagggaga
gggagcataACGACCTGCTAGGGCTCGGACGCTTCCACCAGCTCCGGCTG
TCTCCGTCGCCAGTGTTCCGCCGCGAGATGACGCGTGACTTCGCGCCCGT
TCGTTTcccggtgggagggacgcaGGTCAGGCCGTGTGgaccgggaagag
gggccagagaggtcgaggtcgagggagggaggcagggagggctggaAAGC
ACTCTGACGGGAGgcgaggtggcggggagggagaagggttTAGCCGTGAG
CCACACTCGGCGCCCGAGTAGGTTGCACGTGGAGGAACTCCGattagagg
gagggagggagggaaggaaggagggagggagggaaggagggagggaagga
gggagggcgggagcgaggacagGAGCGGGCTTCTGTCGGGTGGCGACGCC
AATTCCACGTTTGGCCGATGGAGTGGCAAGAAATGGATACGATGCGTCGT
TCACCAGGACGTGTCTGTCGGGGCTGTCGACACGCTTAGAGAcaggggcg
gaaggaggcacTGCGTCGGCGGCCCCCTCGTTCCTCCCGCCGGGGAACGG
GCCTTCCCCCTgcgggatggaaggagggagagagcgagggaagaaaggga
gggcgtgggaggaggacggggacgaggacggctcCCATGGATGGCGGCGC
TGCCGGCCTCGGACTTTCAGTTTCCAGTCCTGCTCTCCCGTCATGACCGC
CCTGGCCTCGCCCTACCTCCACCCGATAAGCACCGGTCCCTCTActggca
cctcctcctctccctcgttttCCGACTTTGTCCTCCGTGGATCCAGGTAG
CGCAGAGGCGGGCCGGTGGCATGCGGGCCGGTGGCATGCGAGGCGCTGGA
TGGGGAGGataaggagggcaagaaaacAGCACCTGCggttcgtggaggag
gaatgggtcATGGCCAgcgcagggaggacgacaaggaAACAACGAGGCAG
TATTcctgccaaggaggaaggagggaagagaaagggtcTTAGAGGCTTAC
CTGCCGCGCATTCGTCCGCTtagagacgagggaggctggTGGTGTCCGTG
TGATATGAGGCTTCCACAAGAGACAAGGAGGCTCCGTTGGCCCCACACAC
TAGCTAGGAACAGAATAGAGTAGACCAGCGTCGGGACAGCATCAGGCAAT
AGTAAAAGTcaaaggaaggacaggggaCGCGAGCCCGTGTCCAGGGATGG
ACTCACTGCTTGTTTGATAGAAGGCTTACTGTGTCATCAGTGAAAAGTGT
GAGACGAATTAGTTTGATGCATGTAGGCCGCCTATTTTGAGCCTATTTGC
AGGAACTTAGGAAATCATAGCAAATAATGCAGCTCTGCACAGGCCAGAAG
GCGTGGGGCTTCAGCATCAttagaaggagagggatgaatGGAAGCAATGG
GCAAGCACTAAAAAAAAACATCGAGCATAAATAATCTCGCGTCTCGccaa
agaaagaggaaactATTCATATATGA back to topCoding sequence (CDS) from alignment at CM002458.1:180682..183607+ >rna1801 ID=rna1801|Name=rna1801|organism=Nannochloropsis gaditana|type=CDS|length=1992bp|location=Sequence derived from alignment at CM002458.1:180682..183607+ (Nannochloropsis gaditana)
atggagagagacACACAAAGCATTTCTCAAGATAATGCACGGCATTGCAT
GATATGTCTGGGCTGCCCATCTACTTCAACACCTCCTGACAAGGCAGTAG
CTTTGTCGACTGCGGATCTTTCCGCTGAGAGCTCTCCATTTCTTCAATGT
CCGATTGATGGTCGAATAATATGCCATAGTAAATGTTTGGAGGATTTGGT
GCTGTTCAATGTCGCGCCGGAACGCTTGCGAGCCTACCACGGGCTGGTAC
CTTGCCCATGGATCGACGCCTCTGCGCTTCGAGAAAGCCCATGCTCTCAC
CGTTGGCAATACCGAGACCTGGTCAAACATTTATCATTTGAAATGCAAAT
CAAGTACACAGAGGAAATGACGGCATTCATTCGTACGTTGCTGGGCAATC
CAAGTGAAAGTGCTCGGGAGACGGACACCCTCGTAAACGAGAAcaaagag
aaaaaggcgTTGACAATGGAGGATCCAGACGATCCCCGTGTGCTCTCAGC
AGCGGCACACATCAAGGAAAATATACTCAACCTCAGATGTCCTCAGTGCA
TGGCTGTCTTCTACGATTTTGACGCCTGCTGCGCGGTGACGTGTCGTGCG
TGTGGGATTTCCTTTTGCGGGCTGTGCATGATGCCACCGGGCGGCAAGAG
TAAGAAGGATGGGAATATGGAAGGAAGCGAtaggacgaaggaggcagcGC
ATGCCCACGTCATCGCTGTGCACGGTCGCCTCTTCatgcaagaagaggaa
attcTCCGGCAGCAAAACGTGTTTCGCCAGCACCGGCTCGTCCACTACCT
GGTGTCTCTGGCggtttccccctccctccctccctccctccctcccttct
cttctcttccccttgctccttcgcTGTCCACCgacgcctccctgccccag
gATGACGCCAGGCTCACAGCTCCGGGCATGGACATCCGCGCAGAGAGAAG
CGAAGGCGAAGCAGCAGGCGAGGAGGTACGGCGGGCTGCTGAGGTCGCAC
TCGTCGGGGTACCGCAGCCAGCCCTAATGGAAAGGGTACTCTTCCAGGTC
GCGCGTGAATGCAACGATGTAGGGCTGGACGTGAACGAAATCCGCAGGAA
GGCTCACGAAGCACTCCGGGGGCCAAACGAGGGAATGGCCGGGGGGAAAC
AAGATAGAGAGGGCCCGACGccgtcggagggagggagggagagggagcat
aACGACCTGCTAGGGCTCGGACGCTTCCACCAGCTCCGGCTGTCTCCGTC
GCCAGTGTTCCGCCGCGAGATGACGCGTGACTTCGCGCCCGTTCGTTTcc
cggtgggagggacgcaGGTCAGGCCGTGTGgaccgggaagaggggccaga
gaggtcgaggtcgagggagggaggcagggagggctggaAAGCACTCTGAC
GGGAGgcgaggtggcggggagggagaagggttTAGCCGTGAGCCACACTC
GGCGCCCGAGTAGGTTGCACGTGGAGGAACTCCGattagagggagggagg
gagggaaggaaggagggagggagggaaggagggagggaaggagggagggc
gggagcgaggacagGAGCGGGCTTCTGTCGGGTGGCGACGCCAATTCCAC
GTTTGGCCGATGGAGTGGCAAGAAATGGATACGATGCGTCGTTCACCAGG
ACGTGTCTGTCGGGGCTGTCGACACGCTTAGAGAcaggggcggaaggagg
cacTGCGTCGGCGGCCCCCTCGTTCCTCCCGCCGGGGAACGGGCCTTCCC
CCTgcgggatggaaggagggagagagcgagggaagaaagggagggcgtgg
gaggaggacggggacgaggacggctcCCATGGATGGCGGCGCTGCCGGCC
TCGGACTTTCAGTTTCCAGTCCTGCTCTCCCGTCATGACCGCCCTGGCCT
CGCCCTACCTCCACCCGATAAGCACCGGTCCCTCTActggcacctcctcc
tctccctcgttttCCGACTTTGTCCTCCGTGGATCCAGGTAG back to top
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