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Properties
| Property Name | Value |
|---|
| Product | Pleckstrin like protein |
| Orig transcript id | gnl|cribi|Naga_100013g38.9765.mrna |
| Orig protein id | gnl|cribi|Naga_100013g38.9765 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:471357..475278 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna180 ID=rna180|Name=rna180|organism=Nannochloropsis gaditana|type=mRNA|length=1121bp
GAGGCGAGGCAAACCCGCCGTCAGGGCCTTGGACAACAGGAAGTCTGGGA
TTTTTCAGGGTGGAAAGGACAAGTCGTTTCTTAAAGACATGGCATGTTTT
GATCTTGACTGTGTGGGACGTATGCTTGGTGAGTGATGCCGGAATTGGAA
GAAGCACGCTGGCCTCCTTACCTTTCTTCAAATCGAGGAAGAACAACGAC
CTCTATGGAGCGCCCCACTTTTTTTCATAGTAGTATGCTAAATAAGCAGA
GTTTGGAACGACGTGACAAAGTTCCACGAGAAATGGCATGTGCGATTAGT
TTTTTGGGGGTTCATCGCACTGATCCACCCTCCTGCCCACGGCTTATCTA
TTTCCCTGCAGCGTCAAGAAGACAAATATTCAACAATGGTAAAGATTGTA
TCTAACAAGGCAGAATTCTACGAGGTGTTGAACAGCGCAGGCAACAAGGC
CGTGATTGTGGATTTTTTTGCCACTTGGTGCGGGCCTTGCAAGGTGATTG
CTCCTTATTTTGAGGAACTATCGACGAAATTTCCTGACGTCGTTTTCATC
AAGGTCGATGTGGATGAGAATGAGGAAGTTGCAGCTTTTGCGGGAATATC
GGCCATGCCTACCTTTCAAGTGTACAAGGATGGAAAGAAAGTTGGGGAGC
TGATGGGTGCTGCCAAGGATAAGCTCTTGGGCCTTGTGGAAGCGCACAAA
TAACTCGACTTCGAGATGCAGAGAAAATCGTACGGAGCATATATTTCGCG
CGTAGTTCTATACTGACGAGGGTGCGAATACGAAAAAGGGAAAACGAGTC
TTCGTGGAATTAAAGCAGAGCAAGACGTAGTTGCAAGGTCGATGGAAGCT
TTGGGCAGAGGTACAATGCACATCTCTTTTTCAAATTAGAAAAGCTTGCT
TTTTTATTGGAGGCTGCCTTTGAAAGAGAGATAATACGCTGGGGTGGAAT
CTTTTTTCGCGGGGATGGAGCTTTTGAAAACGAACGCCAGGGAGAAATGC
AAAAAGGATTACAGACGTGGTGCAGCTTGCAATTAAAAGTCACTTGTGCG
GAGCTCTGAATCAGCATGCCGATTGCTCACGAAGGATAAAATTAAGATTA
TGCTCGCACGTCTTCGTCTTC back to topprotein sequence of rna180 >rna180-protein ID=rna180-protein|Name=rna180|organism=Nannochloropsis gaditana|type=polypeptide|length=1157bp
MAMEEFTTLSLEDPEEVQFPQRLKEGWLKQQTMRRHLWSRHPIWQRRYFI
LERQTSFMAQLSWFSCQPGDFLSSLAAGTRKQRALGTVALDSTCSVDISA
KDESIFELKVLAKERTLILRVEEMTEKEEWAGALHLAIMARKASKEPDMF
TNHMPSNVMQQALGPNHEAEMENIPEESKEGVKETDTQNPLLTPELLARK
SPLIPSAESPLPLLSPPVNNEEPRISNEAPLTADGITGYLSPVSATSCPV
DSVPPEAPYPRQPATAPSSTPPSQSNSVQQPSHTMTVIAEQTREIERLRN
SVRTGEEKEKDLVEKVAALEGQLSTEHFQLTRLGFVKKAADVENAKRIAE
LESALSQLRRDTAAVEEAKRALSEKLQFMDGEFHLVHRLLGCTSGDRVEK
KLQERLESWDRQSAEWHQERLRLEEVCARQADRIRALGQEKAEAILDPHG
PVDKSSAALESTTFAADTTQAKSGEMSGAHSSSSLKTNAREAELEEELHG
LRGALAETTRMLVEAQQQAAELRETSDGLQKLWWAQDHKGRKEDPEQGQE
PFLPRELCGRVGGTLSTMAHDLVAILGELEARLQKGGCLSASPLVFDEGA
PTCCSSTESETSRQSFPPEELVAREDLSEIDGRQGESHLHEPSTSVCTQT
SELEPFERLTHNALHLATVLARKVAIAEAEMTTPRRRSWWPDRPTPLAQH
CMRLREMTQAVSAKATAFVAHAEALLSTRNSPSLQRAPDHTRSTGSGTSS
DGRTGIQTGADGVGRGQSPEGEGFGVCLASDTEILRALHATKAELEDTLR
AQFEAHSSLEDELISQQDAQAWIDSKPGTMPAATTEWLTGSSYHPCPSPS
PNPLSAPPSEGHATNRRGKNEGEKQQPLDHEESHPNRSASFPHYYPIPDA
SSLRDEEKRLKTQRRRLVEERKRMEAVSAQLAMQRRSIDDCMLMLSDQVA
ISRKSLDQRKKELQTAGSLPHTHTSISEKERQTMSPRQCLSAMAETSAAP
QVPASSLSLLKRKANTTREKLKARHSPGRDDERQRTSEKQTVRETHEKEE
KPVRLQETLPDEDSLTLRKRTGTLTDSTTPVGPNGVDKHFDHSKDTTRLQ
YLEKEGRKLGLTLSKKREKPLLGKADMIRFTKEIGRLEQRLSEEKSVAAR
YRGSPSL back to topmRNA from alignment at CM002455.1:471357..475278- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna180 ID=rna180|Name=rna180|organism=Nannochloropsis gaditana|type=mRNA|length=3922bp|location=Sequence derived from alignment at CM002455.1:471357..475278- (Nannochloropsis gaditana)
ACTTCTCTTCGTTCCAAAAAGGCTATAGGGTATCACAGCTGCTCTGGCGT
TGACCTGCAATGGCCATGGAGGAGTTCACTACCCTGTCTCTTGAGGACCC
CGAAGAGGTCCAGTTCCCGCAGCGTCTCAAGGAGGGATGGCTTAAGCAAC
AAACAATGCGCCGGCACCTGTGGAGTCGACACCCCATTTGGCAGCGGCGA
TACTTTATTCTCGAACGGCAGACTTCCTTCATGGCACAATTAAGTTGGTT
TAGCTGCCAGCCTGGTGATTTTTTGTCGTCCTTGGCTGCTGGCACGAGAA
AACAGAGGGCATTAGGAACCGTGGCCCTTGACTCCACCTGCAGCGTCGAT
ATAAGCGCTAAGGACGAGAGCATATTTGAGTTGAAAGTACTAGCAAAGGA
GCGTACTTTGATCTTACGTGTAGAAGAGATGACTGAGAAGGAGGAATGGG
CGGGAGCGTTGCATCTTGCCATTATGGCAAGAAAAGCTTCTAAAGAACCC
GACATGTTCACAAACCACATGCCTTCTAACGTAATGCAGCAAGCGCTGGG
CCCCAATCATGAAGCTGAAATGGAAAATATTCCGGAAGAGAGCAAAGAGG
GAGTGAAGGAAACCGATACACAGAACCCTCTCTTGACGCCCGAGCTGCTA
GCTAGAAAGAGCCCCCTCATCCCTAGCGCCGAATCGCCCCTGCCTCTTCT
TTCCCCACCTGTCAACAATGAAGAGCCCAGGATAAGCAATGAAGCCCCGC
TGACAGCGGATGGCATCACAGGCTACTTATCCCCAGTTTCTGCCACATCG
TGCCCCGTCGACTCGGTTCCTCCTGAAGCGCCATATCCGCGTCAACCCGC
CACCGCACCATCTTCTACCCCTCCATCTCAAAGCAACTCCGTCCAACAGC
CCTCCCATACAATGACCGTGATTGCCGAGCAGACGAGGGAGATAGAGCGC
CTCCGTAATAGCGTGAGAACAGGGGAGGAGAAAGAGAAGGACTTAGTCGA
GAAGGTGGCGGCACTAGAAGGACAATTGTCCACCGAGCATTTTCAATTGA
CCAGATTGGGCTTCGTGAAGAAGGCAGCAGATGTGGAAAATGCCAAAAGA
ATCGCGGAACTGGAGTCTGCGCTTTCCCAGCTCCGGAGGGACACGGCTGC
AGTGGAGGAGGCGAAGCGGGCGCTGTCGGAGAAGTTGCAGTTCATGGACG
GTGAATTCCACCTGGTGCATCGACTCCTGGGCTGCACCTCGGGAGACCGG
GTCGAGAAGAAGCTACAAGAGCGGCTCGAATCCTGGGACCGGCAGAGCGC
GGAGTGGCACCAGGAGCGCCTCCGCTTGGAGGAGGTCTGTGCGCGACAGG
CAGATCGTATCCGGGCACTTGGGCAGGAGAAAGCGGAGGCAATCCTCGAC
CCACATGGGCCTGTGGACAAAAGCTCCGCGGCCTTGGAGTCTACGACTTT
CGCCGCTGACACGACACAAGCCAAGTCCGGCGAGATGTCCGGGGCGCATT
CCTCCTCTTCCCTGAAAACGAACGCTCGAGAGGCGGAGCTTGAAGAGGAA
CTACATGGCCTGCGGGGGGCTCTCGCTGAAACCACAAGGATGCTGGTGGA
GGCCCAACAACAAGCAGCGGAATTGCGTGAGACAAGCGATGGTTTGCAAA
AACTCTGGTGGGCTCAGGATCATAAAGGGCGGAAAGAGGACCCCGAACAA
GGCCAGGAGCCGTTCTTGCCGCGGGAGCTTTGTGGTCGGGTTGGCGGTAC
TCTCTCGACCATGGCGCACGATTTGGTTGCCATCCTCGGCGAACTGGAAG
CGCGGCTCCAGAAAGGCGGGTGCCTGTCTGCTTCCCCCCTCGTGTTCGAT
GAAGGGGCGCCCACCTGTTGTAGCAGCACGGAAAGCGAGACGAGCAGGCA
GTCCTTCCCGCCCGAGGAACTTGTGGCGCGCGAGGATCTGAGCGAAATCG
ACGGGAGGCAAGGGGAGAGTCACCTGCATGAACCAAGTACGAGCGTTTGC
ACACAGACGTCAGAACTCGAGCCGTTCGAGCGCCTTACCCACAATGCCCT
GCATCTCGCCACCGTCCTCGCCCGAAAAGTAGCTATCGCCGAAGCGGAAA
TGACGACACCCCGGCGGAGGTCCTGGTGGCCGGACAGGCCAACGCCACTC
GCCCAGCATTGCATGCGTCTTCGAGAAATGACTCAAGCCGTCAGCGCCAA
GGCGACGGCCTTCGTTGCCCACGCCGAGGCTCTCCTGAGCACGCGCAACT
CTCCGTCCTTGCAGAGGGCCCCCGACCACACACGCTCCACCGGATCCGGG
ACCAGCTCAGATGGCAGGACGGGCATTCAAACAGGGGCGGATGGCGTCGG
CCGCGGCCAAAGTCCGGAAGGCGAGGGTTTCGGGGTGTGTCTGGCCTCAG
ATACGGAAATTTTGAGGGCCCTGCACGCCACCAAGGCTGAACTGGAAGAC
ACTCTGAGGGCGCAGTTCGAGGCACACTCCTCACTCGAAGACGAGCTCAT
TTCCCAGCAGGACGCACAGGCATGGATCGATTCGAAGCCTGGCACAATGC
CCGCAGCGACGACCGAGTGGCTCACAGGAAGCTCTTACCACCCCTGTCCT
TCGCCTTCGCCGAATCCCCTCTCGGCTCCTCCTTCCGAGGGGCATGCAAC
AAATCGACGAGGGAAAAATGAGGGGGAAAAGCAGCAGCCCCTGGATCACG
AAGAGTCACACCCCAACCGCTCTGCCTCGTTCCCGCATTACTACCCGATT
CCCGACGCCTCGAGCCTCCGTGACGAAGAAAAGCGCCTCAAAACGCAGCG
ACGAAGATTGGTCGAGGAGCGCAAACGCATGGAAGCAGTCAGTGCACAGC
TCGCTATGCAAAGGCGAAGCATTGATGATTGCATGCTGATGCTCTCGGAC
CAGGTCGCCATCTCCCGCAAATCTCTCGATCAACGTAAGAAAGAGCTCCA
GACCGCGGGATCTTTGCCTCACACCCACACATCTATAAGTGAGAAGGAGC
GGCAGACCATGAGTCCACGACAATGTCTTTCAGCGATGGCAGAGACATCG
GCCGCGCCTCAAGTACCGGCTTCCTCGCTGAGTTTGCTGAAAAGGAAAGC
AAATACGACCAGGGAGAAGCTCAAGGCAAGGCACTCACCAGGACGAGATG
ACGAGAGGCAACGAACATCGGAAAAGCAGACCGTACGTGAGACGCACGAA
AAAGAAGAGAAGCCAGTAAGACTGCAGGAGACTCTCCCTGATGAAGACAG
TTTGACTTTGAGGAAGCGCACCGGAACCCTTACCGACTCTACTACACCAG
TCGGTCCCAACGGGGTTGATAAGCATTTCGATCACTCCAAAGACACCACC
CGTCTCCAGTATCTTGAAAAAGAAGGTAGGAAGCTAGGGCTCACTCTTAG
CAAGAAGAGGGAGAAGCCCCTCCTTGGAAAAGCAGACATGATTCGCTTTA
CTAAGGAGATTGGTCGTTTGGAACAGCGCCTCAGTGAGGAGAAATCTGTA
GCTGCCCGGTATCGAGGCTCACCAAGTCTCTAATACCACGCCGAAACCTT
TAATCGTCCCCTGATATGTCTCCGTACTGAACTTTGATGTGGCCGTGACC
CAGTTAATATCTTTTTGCACCCAATTCACTGACTGTTCATATGCCTTGTA
GAACGATTTCGAATATTTACAGTAAAAATTGTACAACAGATCAACCAACC
CATTGCTGAAGATGGAGCTTCCATTTTTCTCTTAAGTTATTTGTAAAGAG
ATATTTGTATACCAGCATGGTACCTGGGCGGAACACTGAATGGTCTTGCT
TAGACAATTGCAAGTGGGTAACGGGGGAGGTTAAATATGAAATCAAGGAC
ACAACGAGCTGAGTGTGAATTCGATAATGAACGCCTGCGACAGGTGTCGA
TCTCTTTCGTTTTAGACTAGCA back to topCoding sequence (CDS) from alignment at CM002455.1:471357..475278- >rna180 ID=rna180|Name=rna180|organism=Nannochloropsis gaditana|type=CDS|length=3474bp|location=Sequence derived from alignment at CM002455.1:471357..475278- (Nannochloropsis gaditana)
ATGGCCATGGAGGAGTTCACTACCCTGTCTCTTGAGGACCCCGAAGAGGT
CCAGTTCCCGCAGCGTCTCAAGGAGGGATGGCTTAAGCAACAAACAATGC
GCCGGCACCTGTGGAGTCGACACCCCATTTGGCAGCGGCGATACTTTATT
CTCGAACGGCAGACTTCCTTCATGGCACAATTAAGTTGGTTTAGCTGCCA
GCCTGGTGATTTTTTGTCGTCCTTGGCTGCTGGCACGAGAAAACAGAGGG
CATTAGGAACCGTGGCCCTTGACTCCACCTGCAGCGTCGATATAAGCGCT
AAGGACGAGAGCATATTTGAGTTGAAAGTACTAGCAAAGGAGCGTACTTT
GATCTTACGTGTAGAAGAGATGACTGAGAAGGAGGAATGGGCGGGAGCGT
TGCATCTTGCCATTATGGCAAGAAAAGCTTCTAAAGAACCCGACATGTTC
ACAAACCACATGCCTTCTAACGTAATGCAGCAAGCGCTGGGCCCCAATCA
TGAAGCTGAAATGGAAAATATTCCGGAAGAGAGCAAAGAGGGAGTGAAGG
AAACCGATACACAGAACCCTCTCTTGACGCCCGAGCTGCTAGCTAGAAAG
AGCCCCCTCATCCCTAGCGCCGAATCGCCCCTGCCTCTTCTTTCCCCACC
TGTCAACAATGAAGAGCCCAGGATAAGCAATGAAGCCCCGCTGACAGCGG
ATGGCATCACAGGCTACTTATCCCCAGTTTCTGCCACATCGTGCCCCGTC
GACTCGGTTCCTCCTGAAGCGCCATATCCGCGTCAACCCGCCACCGCACC
ATCTTCTACCCCTCCATCTCAAAGCAACTCCGTCCAACAGCCCTCCCATA
CAATGACCGTGATTGCCGAGCAGACGAGGGAGATAGAGCGCCTCCGTAAT
AGCGTGAGAACAGGGGAGGAGAAAGAGAAGGACTTAGTCGAGAAGGTGGC
GGCACTAGAAGGACAATTGTCCACCGAGCATTTTCAATTGACCAGATTGG
GCTTCGTGAAGAAGGCAGCAGATGTGGAAAATGCCAAAAGAATCGCGGAA
CTGGAGTCTGCGCTTTCCCAGCTCCGGAGGGACACGGCTGCAGTGGAGGA
GGCGAAGCGGGCGCTGTCGGAGAAGTTGCAGTTCATGGACGGTGAATTCC
ACCTGGTGCATCGACTCCTGGGCTGCACCTCGGGAGACCGGGTCGAGAAG
AAGCTACAAGAGCGGCTCGAATCCTGGGACCGGCAGAGCGCGGAGTGGCA
CCAGGAGCGCCTCCGCTTGGAGGAGGTCTGTGCGCGACAGGCAGATCGTA
TCCGGGCACTTGGGCAGGAGAAAGCGGAGGCAATCCTCGACCCACATGGG
CCTGTGGACAAAAGCTCCGCGGCCTTGGAGTCTACGACTTTCGCCGCTGA
CACGACACAAGCCAAGTCCGGCGAGATGTCCGGGGCGCATTCCTCCTCTT
CCCTGAAAACGAACGCTCGAGAGGCGGAGCTTGAAGAGGAACTACATGGC
CTGCGGGGGGCTCTCGCTGAAACCACAAGGATGCTGGTGGAGGCCCAACA
ACAAGCAGCGGAATTGCGTGAGACAAGCGATGGTTTGCAAAAACTCTGGT
GGGCTCAGGATCATAAAGGGCGGAAAGAGGACCCCGAACAAGGCCAGGAG
CCGTTCTTGCCGCGGGAGCTTTGTGGTCGGGTTGGCGGTACTCTCTCGAC
CATGGCGCACGATTTGGTTGCCATCCTCGGCGAACTGGAAGCGCGGCTCC
AGAAAGGCGGGTGCCTGTCTGCTTCCCCCCTCGTGTTCGATGAAGGGGCG
CCCACCTGTTGTAGCAGCACGGAAAGCGAGACGAGCAGGCAGTCCTTCCC
GCCCGAGGAACTTGTGGCGCGCGAGGATCTGAGCGAAATCGACGGGAGGC
AAGGGGAGAGTCACCTGCATGAACCAAGTACGAGCGTTTGCACACAGACG
TCAGAACTCGAGCCGTTCGAGCGCCTTACCCACAATGCCCTGCATCTCGC
CACCGTCCTCGCCCGAAAAGTAGCTATCGCCGAAGCGGAAATGACGACAC
CCCGGCGGAGGTCCTGGTGGCCGGACAGGCCAACGCCACTCGCCCAGCAT
TGCATGCGTCTTCGAGAAATGACTCAAGCCGTCAGCGCCAAGGCGACGGC
CTTCGTTGCCCACGCCGAGGCTCTCCTGAGCACGCGCAACTCTCCGTCCT
TGCAGAGGGCCCCCGACCACACACGCTCCACCGGATCCGGGACCAGCTCA
GATGGCAGGACGGGCATTCAAACAGGGGCGGATGGCGTCGGCCGCGGCCA
AAGTCCGGAAGGCGAGGGTTTCGGGGTGTGTCTGGCCTCAGATACGGAAA
TTTTGAGGGCCCTGCACGCCACCAAGGCTGAACTGGAAGACACTCTGAGG
GCGCAGTTCGAGGCACACTCCTCACTCGAAGACGAGCTCATTTCCCAGCA
GGACGCACAGGCATGGATCGATTCGAAGCCTGGCACAATGCCCGCAGCGA
CGACCGAGTGGCTCACAGGAAGCTCTTACCACCCCTGTCCTTCGCCTTCG
CCGAATCCCCTCTCGGCTCCTCCTTCCGAGGGGCATGCAACAAATCGACG
AGGGAAAAATGAGGGGGAAAAGCAGCAGCCCCTGGATCACGAAGAGTCAC
ACCCCAACCGCTCTGCCTCGTTCCCGCATTACTACCCGATTCCCGACGCC
TCGAGCCTCCGTGACGAAGAAAAGCGCCTCAAAACGCAGCGACGAAGATT
GGTCGAGGAGCGCAAACGCATGGAAGCAGTCAGTGCACAGCTCGCTATGC
AAAGGCGAAGCATTGATGATTGCATGCTGATGCTCTCGGACCAGGTCGCC
ATCTCCCGCAAATCTCTCGATCAACGTAAGAAAGAGCTCCAGACCGCGGG
ATCTTTGCCTCACACCCACACATCTATAAGTGAGAAGGAGCGGCAGACCA
TGAGTCCACGACAATGTCTTTCAGCGATGGCAGAGACATCGGCCGCGCCT
CAAGTACCGGCTTCCTCGCTGAGTTTGCTGAAAAGGAAAGCAAATACGAC
CAGGGAGAAGCTCAAGGCAAGGCACTCACCAGGACGAGATGACGAGAGGC
AACGAACATCGGAAAAGCAGACCGTACGTGAGACGCACGAAAAAGAAGAG
AAGCCAGTAAGACTGCAGGAGACTCTCCCTGATGAAGACAGTTTGACTTT
GAGGAAGCGCACCGGAACCCTTACCGACTCTACTACACCAGTCGGTCCCA
ACGGGGTTGATAAGCATTTCGATCACTCCAAAGACACCACCCGTCTCCAG
TATCTTGAAAAAGAAGGTAGGAAGCTAGGGCTCACTCTTAGCAAGAAGAG
GGAGAAGCCCCTCCTTGGAAAAGCAGACATGATTCGCTTTACTAAGGAGA
TTGGTCGTTTGGAACAGCGCCTCAGTGAGGAGAAATCTGTAGCTGCCCGG
TATCGAGGCTCACCAAGTCTCTAA back to top
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