EWM30477.1, cds180 (CDS) Nannochloropsis gaditana

Overview
NameEWM30477.1
Unique Namecds180
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:471746..475219 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30477.1
ProductPleckstrin like protein
Orig transcript idgnl|cribi|Naga_100013g38.9765.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:471746..475219 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH-like_dom
IPR001849PH_domain
Homology
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BLAST of EWM30477.1 vs. NCBI_GenBank
Match: gi|585113141|gb|EWM30477.1| (Pleckstrin like protein [Nannochloropsis gaditana])

HSP 1 Score: 2356.25 bits (6105), Expect = 0.000e+0
Identity = 1157/1157 (100.00%), Postives = 1157/1157 (100.00%), Query Frame = 0 
Query:    1 MAMEEFTTLSLEDPEEVQFPQRLKEGWLKQQTMRRHLWSRHPIWQRRYFILERQTSFMAQLSWFSCQPGDFLSSLAAGTRKQRALGTVALDSTCSVDISAKDESIFELKVLAKERTLILRVEEMTEKEEWAGALHLAIMARKASKEPDMFTNHMPSNVMQQALGPNHEAEMENIPEESKEGVKETDTQNPLLTPELLARKSPLIPSAESPLPLLSPPVNNEEPRISNEAPLTADGITGYLSPVSATSCPVDSVPPEAPYPRQPATAPSSTPPSQSNSVQQPSHTMTVIAEQTREIERLRNSVRTGEEKEKDLVEKVAALEGQLSTEHFQLTRLGFVKKAADVENAKRIAELESALSQLRRDTAAVEEAKRALSEKLQFMDGEFHLVHRLLGCTSGDRVEKKLQERLESWDRQSAEWHQERLRLEEVCARQADRIRALGQEKAEAILDPHGPVDKSSAALESTTFAADTTQAKSGEMSGAHSSSSLKTNAREAELEEELHGLRGALAETTRMLVEAQQQAAELRETSDGLQKLWWAQDHKGRKEDPEQGQEPFLPRELCGRVGGTLSTMAHDLVAILGELEARLQKGGCLSASPLVFDEGAPTCCSSTESETSRQSFPPEELVAREDLSEIDGRQGESHLHEPSTSVCTQTSELEPFERLTHNALHLATVLARKVAIAEAEMTTPRRRSWWPDRPTPLAQHCMRLREMTQAVSAKATAFVAHAEALLSTRNSPSLQRAPDHTRSTGSGTSSDGRTGIQTGADGVGRGQSPEGEGFGVCLASDTEILRALHATKAELEDTLRAQFEAHSSLEDELISQQDAQAWIDSKPGTMPAATTEWLTGSSYHPCPSPSPNPLSAPPSEGHATNRRGKNEGEKQQPLDHEESHPNRSASFPHYYPIPDASSLRDEEKRLKTQRRRLVEERKRMEAVSAQLAMQRRSIDDCMLMLSDQVAISRKSLDQRKKELQTAGSLPHTHTSISEKERQTMSPRQCLSAMAETSAAPQVPASSLSLLKRKANTTREKLKARHSPGRDDERQRTSEKQTVRETHEKEEKPVRLQETLPDEDSLTLRKRTGTLTDSTTPVGPNGVDKHFDHSKDTTRLQYLEKEGRKLGLTLSKKREKPLLGKADMIRFTKEIGRLEQRLSEEKSVAARYRGSPSL 1157
            MAMEEFTTLSLEDPEEVQFPQRLKEGWLKQQTMRRHLWSRHPIWQRRYFILERQTSFMAQLSWFSCQPGDFLSSLAAGTRKQRALGTVALDSTCSVDISAKDESIFELKVLAKERTLILRVEEMTEKEEWAGALHLAIMARKASKEPDMFTNHMPSNVMQQALGPNHEAEMENIPEESKEGVKETDTQNPLLTPELLARKSPLIPSAESPLPLLSPPVNNEEPRISNEAPLTADGITGYLSPVSATSCPVDSVPPEAPYPRQPATAPSSTPPSQSNSVQQPSHTMTVIAEQTREIERLRNSVRTGEEKEKDLVEKVAALEGQLSTEHFQLTRLGFVKKAADVENAKRIAELESALSQLRRDTAAVEEAKRALSEKLQFMDGEFHLVHRLLGCTSGDRVEKKLQERLESWDRQSAEWHQERLRLEEVCARQADRIRALGQEKAEAILDPHGPVDKSSAALESTTFAADTTQAKSGEMSGAHSSSSLKTNAREAELEEELHGLRGALAETTRMLVEAQQQAAELRETSDGLQKLWWAQDHKGRKEDPEQGQEPFLPRELCGRVGGTLSTMAHDLVAILGELEARLQKGGCLSASPLVFDEGAPTCCSSTESETSRQSFPPEELVAREDLSEIDGRQGESHLHEPSTSVCTQTSELEPFERLTHNALHLATVLARKVAIAEAEMTTPRRRSWWPDRPTPLAQHCMRLREMTQAVSAKATAFVAHAEALLSTRNSPSLQRAPDHTRSTGSGTSSDGRTGIQTGADGVGRGQSPEGEGFGVCLASDTEILRALHATKAELEDTLRAQFEAHSSLEDELISQQDAQAWIDSKPGTMPAATTEWLTGSSYHPCPSPSPNPLSAPPSEGHATNRRGKNEGEKQQPLDHEESHPNRSASFPHYYPIPDASSLRDEEKRLKTQRRRLVEERKRMEAVSAQLAMQRRSIDDCMLMLSDQVAISRKSLDQRKKELQTAGSLPHTHTSISEKERQTMSPRQCLSAMAETSAAPQVPASSLSLLKRKANTTREKLKARHSPGRDDERQRTSEKQTVRETHEKEEKPVRLQETLPDEDSLTLRKRTGTLTDSTTPVGPNGVDKHFDHSKDTTRLQYLEKEGRKLGLTLSKKREKPLLGKADMIRFTKEIGRLEQRLSEEKSVAARYRGSPSL
Sbjct:    1 MAMEEFTTLSLEDPEEVQFPQRLKEGWLKQQTMRRHLWSRHPIWQRRYFILERQTSFMAQLSWFSCQPGDFLSSLAAGTRKQRALGTVALDSTCSVDISAKDESIFELKVLAKERTLILRVEEMTEKEEWAGALHLAIMARKASKEPDMFTNHMPSNVMQQALGPNHEAEMENIPEESKEGVKETDTQNPLLTPELLARKSPLIPSAESPLPLLSPPVNNEEPRISNEAPLTADGITGYLSPVSATSCPVDSVPPEAPYPRQPATAPSSTPPSQSNSVQQPSHTMTVIAEQTREIERLRNSVRTGEEKEKDLVEKVAALEGQLSTEHFQLTRLGFVKKAADVENAKRIAELESALSQLRRDTAAVEEAKRALSEKLQFMDGEFHLVHRLLGCTSGDRVEKKLQERLESWDRQSAEWHQERLRLEEVCARQADRIRALGQEKAEAILDPHGPVDKSSAALESTTFAADTTQAKSGEMSGAHSSSSLKTNAREAELEEELHGLRGALAETTRMLVEAQQQAAELRETSDGLQKLWWAQDHKGRKEDPEQGQEPFLPRELCGRVGGTLSTMAHDLVAILGELEARLQKGGCLSASPLVFDEGAPTCCSSTESETSRQSFPPEELVAREDLSEIDGRQGESHLHEPSTSVCTQTSELEPFERLTHNALHLATVLARKVAIAEAEMTTPRRRSWWPDRPTPLAQHCMRLREMTQAVSAKATAFVAHAEALLSTRNSPSLQRAPDHTRSTGSGTSSDGRTGIQTGADGVGRGQSPEGEGFGVCLASDTEILRALHATKAELEDTLRAQFEAHSSLEDELISQQDAQAWIDSKPGTMPAATTEWLTGSSYHPCPSPSPNPLSAPPSEGHATNRRGKNEGEKQQPLDHEESHPNRSASFPHYYPIPDASSLRDEEKRLKTQRRRLVEERKRMEAVSAQLAMQRRSIDDCMLMLSDQVAISRKSLDQRKKELQTAGSLPHTHTSISEKERQTMSPRQCLSAMAETSAAPQVPASSLSLLKRKANTTREKLKARHSPGRDDERQRTSEKQTVRETHEKEEKPVRLQETLPDEDSLTLRKRTGTLTDSTTPVGPNGVDKHFDHSKDTTRLQYLEKEGRKLGLTLSKKREKPLLGKADMIRFTKEIGRLEQRLSEEKSVAARYRGSPSL 1157
The following BLAST results are available for this feature:
BLAST of EWM30477.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585113141|gb|EWM30477.1|0.000e+0100.00Pleckstrin like protein [Nannochloropsis gaditana][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna180rna180Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications