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Properties
| Property Name | Value |
|---|
| Product | ribosomal protein l15 |
| Orig transcript id | gnl|cribi|Naga_100095g3.10174.mrna |
| Orig protein id | gnl|cribi|Naga_100095g3.10174 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:153294..155494 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1796 ID=rna1796|Name=rna1796|organism=Nannochloropsis gaditana|type=mRNA|length=1543bp
CTGCTTATTATGAGTTGGCTTATTGATAAATGTGTTGTGTCCTTTATTTG
CTTCGTACCCTACGTAGCGGGAATACTTCGACAATTGCTAACGGCACATG
CAACGTATTATACCCACATATAATGTACAAAGGCTTACGAGGGGAAGACA
TTCGACTAGCATTTCTATCGAAGATTCGATTATTATTGTTCGTGTAAATG
CACACGCACGGAAAGGCTAATACAGGGTGACGTCTTCACGACTGGAAGTT
GCAGGCGATTGCCACGCAACCAAAAAACATTTTTCGTTTTTTTACTGTCA
CCGTCACCATTTGTTTGTCTCTTTTGCTGATACAACTAGCCGTGGGTGTG
GCAGGTGCTAGTCGAAGACCTTGCATCCGCAATTCTCGGAGTATTGGCCA
CACGGTAACTCTCTCCTCGACGCGAGTGCTGTTCTTCCCCCCTGATATCA
CCTTCTGCGGGATGCCTCCCAAGCGTAAAGCCAAAAGCATCGCGGGCTCG
AGCGAAGCTAAGACCGATTTACCTGCCGCTAACAGCAAAAGAAAAGGAGG
CACAATGTCCATCTGCTCTTCTCCCAACAAGGACTCGGACAACACTGCGC
CTCAATCACGAAAGGTCCACAAGGCAGCTGGAGCGCTTTCCACGGCACCC
CTCCCTCCCGAAACAACTTCAAAAGGATCCAAGGTTTCTTCAACTCGACG
GTATTTTTTGATGAAAAGCGAACCCGACGAATTCAGTGTGGATGATCTGG
CAGCGCAACCCAATCAAACCGGTTGCTGGGAAGGTGTCCGCAATTATCAG
GCAAGGAATCTGATGCGTGACCATATGCACGTGGGTGACCAGGCTTTTTT
CTACCACTCTTCTTGCAAAGTTCCAGGCATTGTGGGGATCATGGAGGTGA
GTCGTGCTGCCTACCCGGACCATTTTCAATGGGACAAAGGCAGCAAGTAT
TATGATGCTGGCAGCGACCGGGAAGCCCCACGATGGTGGATGGTGGACGT
TACACTCCAAGAACGATTGGAAGAGAAAGTTCCCCTGGAGGTCTTGAGGG
AGGAGGCGCTGAAGCCAGGTTGCCCCTTGGCGGGGATGGCTTTGCTACAG
AAAGGGTCCCGGCTGAGCGTGCAGCCAGTCCGGGAGGAGGAATGGAAATT
CATTCACGAAAAGCTGATCATGGCCCCAAAAGGCACAGGGGTAGTCAGGG
AGGAACGAGGGGAAGAAGGGAAGACATCTTCCGCGGATGGAGAAGGAGGA
AAGGGTGAAAAAAAGGACGAGAAGAGATTAGGAGGGAAGAAAAAAAAGCG
GAGGACAGGAACGTGACAGGGCCTTTAAATCACATGATGACGGGGGGAAT
CTGGTGAAAGCGATGCAGCGAAGACAAGTGTTGTACGGAAAAGAGAAAAA
TATGGATTGAAAAGGAGGGACTAAAGGAGGAGAAAGATCTCGACCTCTAA
CAATCCCTCAAGCCATTGCCGTGGACGCCCCCCCACAGGGTGCTGATAAG
GTCCTATTTGACTGAGAACACTTTACAACCGTTTATGTCTCCC back to topprotein sequence of rna1796 >rna1796-protein ID=rna1796-protein|Name=rna1796|organism=Nannochloropsis gaditana|type=polypeptide|length=302bp
MGGRRILVALAVIPAVAGFMLSGSFKGQQSQSLLRPSIQAHRAGAGSLTM
RLFDHKRRDMKFIEDIMGHPGVGDEGHKEPSVTNLRPFPGNYPKKHRKGR
GNAGGGGGSSGYGMRGQNSRGGVRPGFEGGQTPLYRRTPKWPGRPMGPGH
KRTRYALVQVEHLNEAADYFPSRTIIDPGFLLDQCVLTKQKLDLFKVVGG
DVPLTRPLTVLAHGFTASAAAAIEAAGGKCVLLSPTTNEVVEMEGLNVDE
ILAQLDKEEAATEAEEAEGKYVDVPRPGGARERIRAEIRREDKEAYARLN
NA back to topmRNA from alignment at CM002458.1:153294..155494+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1796 ID=rna1796|Name=rna1796|organism=Nannochloropsis gaditana|type=mRNA|length=2201bp|location=Sequence derived from alignment at CM002458.1:153294..155494+ (Nannochloropsis gaditana)
AAAGGTAGTTTACGTGTATGTGTCCGAAAAATGCGAATATATACTTTGTG
TGGAAAACCGCTCCTGGCCACCCACTCGCCcgtgtccttccccttgccct
ggCAACACCACCTTAAAGGATGGATACCCAAGTACGAAGGTGTTGTGGTA
TGATACACGTATGTCTCTTTGCACAATTCgtcagggagagaggcagggcg
TCCCCGTGGctgtgttttttttttcctcagaCATTCTGCTTGTAGCTCGC
TGTCGCCCGGCCCTACTGGAATGGACACGCAAGTGTATCTACCCTGGCAC
TTTACCCTCCTAGTTGCCCTTGTTACGGCGTCCTTCTAACCGACCATCAA
CCATTTTGATAACCCACACAAGTTCAGGATGGGTGGCCGACGCATTCTTG
TGGCCCTCGCTGTCATTCCTGCTGTTGCAGGTAAGCTTTATAAAGTCGAG
CCAGGGGCAAGGGATGGCAGGGAAAGATTTTAGGACCGGTCGACTTGTAC
GCCATTTGATCGTTTTTCCAATTACTGGTTACGCGTGCATGGTTTCTTGG
TGTGTGTGTAATTTTTATGAGTATTCAAGGTTTCAGGCATGTTGTAACAT
TGTTGAGTGGCTAACATAGATTGACGCGTAGTCGAAAGTCGTCAGCTCCC
TGAAGAGGCTATTGAGCCGGGGTTTACTGCACCATCTTCCTTCTGGATGA
CTATAATATGTATCCCACAAATGTGTCTAATCACTCTAAAATACTTATTT
GGAACGAGATACAGCTCTCCTACAATAGACTAGATTGAGGCCTTTTTCAA
TTACAAGGTTACCATCTGGCCGACGACAGCttacccttctttcctcccat
ttcACGCCTTTCTCGTGCAACCAATAGGATTCATGCTCTCGGGTAGTTTC
AAGGGCCAACAGTCTCAGTCTCTGctccgtccctccatccaAGCACACCG
TGCTGGCGCGGGATCACTGACGATGCGCCTTTTCGATCACAAGCGTCGAG
ATATGAAGTTCATTGAAGACATTATGGGGCATCCTGGcgtgggagacgag
ggacaCAAGGAACCTAGCGTGACAAATCTTCGCCCTTTCCCAGGAAACTA
CCCCAAGAAACACCGAAAGGGCCGCGGGAacgccgggggcggaggtggct
CGAGTGGCTACGGAATGCGCGGGCAAAATTCTCGTGGGGGGGTCCGCCCT
GGCTTCGAGGGAGGTCAGACGCCGTTGTACCGACGCACGCCCAAGTGGCC
CGGTCGCCCGATGGGCCCGGGACACAAACGAACCCGCTATGCCTTGGTGC
AGGTGGAACACCTGAACGAGGCCGCCGATTATTTCCCCAGTCGGACTATT
ATTGACCCcggtttcctcctcgatcagTGCGTGCTTACCAAGCAAAAATT
GGATCTCTTCAAGGTGGTGGGTGGCGACGTGCCTTTGACCCGCCCTTTGA
CAGTTCTGGCCCACGGTTTCACGGcttcggccgccgccgccatcgagGCG
GCCGGAGGGAAGTGCGTCTTGCTGTCGCCGACGACCAACGAGGTagtgga
aatggagggctTGAATGTGGACGAGATCCTTGCGCAACTGGACAAAGAAG
AGGCAGCGAcagaagcggaggaggcggaaggcaaATACGTGGATGTGCCC
CGACCTGGGGGCGCGCGCGAACGGATCCGTGCTGAAATCAGACGGGAGGA
TAAAGAGGCCTATGCTCGGCTAAACAACGCATAGGAGCCGAGAAGGAAGT
GAACCAAGGGCTGATTAGAGGGTGGGTCCTTGGCCGAAAGAAAAGGAGTG
GGTGGCGTGGAAGTTTCTTCTATACATACGACGACAATATTGTGGAAAGG
CTGGGAGCATGCGCTCTTGGTCGACGTCCCCACAGATGATAATTCAAGGT
CCGATTGGCTGATACTCCTCACGGACATGCGTGAAAAAGCGGAAGGCTGG
TGTCTCTGATGACCTGAAATGGTGACAGAGTGATGCAAAAGGTGCTGTGG
TGATTGCACAGCACGCATTGGAGGACAAGCATAGTCATTCATACAAGAAG
GAATCTTTCGATCCAAGTTTAGTGGGATGTCGATGTTGAGGGCAGATCTA
AAGAAGTACACGAGACTCAAACGGAGCGCGGGAGTCGAAAACGTTTGTTA
TCAATTGTCACAGTGTCTTAACTCCCGATGATCCCGATGAACATGCTCCT
C back to topCoding sequence (CDS) from alignment at CM002458.1:153294..155494+ >rna1796 ID=rna1796|Name=rna1796|organism=Nannochloropsis gaditana|type=CDS|length=1818bp|location=Sequence derived from alignment at CM002458.1:153294..155494+ (Nannochloropsis gaditana)
ATGGGTGGCCGACGCATTCTTGTGGCCCTCGCTGTCATTCCTGCTGTTGC
AGGATTCATGCTCTCGGGTAGTTTCAAGGGCCAACAGTCTCAGTCTCTGc
tccgtccctccatccaAGCACACCGTGCTGGCGCGGGATCACTGACGATG
CGCCTTTTCGATCACAAGCGTCGAGATATGAAGTTCATTGAAGACATTAT
GGGGCATCCTGGcgtgggagacgagggacaCAAGGAACCTAGCGTGACAA
ATCTTCGCCCTTTCCCAGGAAACTACCCCAAGAAACACCGAAAGGGCCGC
GGGAacgccgggggcggaggtggctCGAGTGGCTACGGAATGCGCGGGCA
AAATTCTCGTGGGGGGGTCCGCCCTGGCTTCGAGGGAGGTCAGACGCCGT
TGTACCGACGCACGCCCAAGTGGCCCGGTCGCCCGATGGGCCCGGGACAC
AAACGAACCCGCTATGCCTTGGTGCAGGTGGAACACCTGAACGAGGCCGC
CGATTATTTCCCCAGTCGGACTATTATTGACCCcggtttcctcctcgatc
agTGCGTGCTTACCAAGCAAAAATTGGATCTCTTCAAGGTGGTGGGTGGC
GACGTGCCTTTGACCCGCCCTTTGACAGTTCTGGCCCACGGTTTCACGGc
ttcggccgccgccgccatcgagGCGGCCGGAGGGAAGTGCGTCTTGCTGT
CGCCGACGACCAACGAGGTagtggaaatggagggctTGAATGTGGACGAG
ATCCTTGCGCAACTGGACAAAGAAGAGGCAGCGAcagaagcggaggaggc
ggaaggcaaATACGTGGATGTGCCCCGACCTGGGGGCGCGCGCGAACGGA
TCCGTGCTGAAATCAGACGGGAGGATAAAGAGGCCTATGCTCGGCTAAAC
AACGCATAGATGGGTGGCCGACGCATTCTTGTGGCCCTCGCTGTCATTCC
TGCTGTTGCAGGATTCATGCTCTCGGGTAGTTTCAAGGGCCAACAGTCTC
AGTCTCTGctccgtccctccatccaAGCACACCGTGCTGGCGCGGGATCA
CTGACGATGCGCCTTTTCGATCACAAGCGTCGAGATATGAAGTTCATTGA
AGACATTATGGGGCATCCTGGcgtgggagacgagggacaCAAGGAACCTA
GCGTGACAAATCTTCGCCCTTTCCCAGGAAACTACCCCAAGAAACACCGA
AAGGGCCGCGGGAacgccgggggcggaggtggctCGAGTGGCTACGGAAT
GCGCGGGCAAAATTCTCGTGGGGGGGTCCGCCCTGGCTTCGAGGGAGGTC
AGACGCCGTTGTACCGACGCACGCCCAAGTGGCCCGGTCGCCCGATGGGC
CCGGGACACAAACGAACCCGCTATGCCTTGGTGCAGGTGGAACACCTGAA
CGAGGCCGCCGATTATTTCCCCAGTCGGACTATTATTGACCCcggtttcc
tcctcgatcagTGCGTGCTTACCAAGCAAAAATTGGATCTCTTCAAGGTG
GTGGGTGGCGACGTGCCTTTGACCCGCCCTTTGACAGTTCTGGCCCACGG
TTTCACGGcttcggccgccgccgccatcgagGCGGCCGGAGGGAAGTGCG
TCTTGCTGTCGCCGACGACCAACGAGGTagtggaaatggagggctTGAAT
GTGGACGAGATCCTTGCGCAACTGGACAAAGAAGAGGCAGCGAcagaagc
ggaggaggcggaaggcaaATACGTGGATGTGCCCCGACCTGGGGGCGCGC
GCGAACGGATCCGTGCTGAAATCAGACGGGAGGATAAAGAGGCCTATGCT
CGGCTAAACAACGCATAG back to top
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