rna1795, rna1795 (mRNA) Nannochloropsis gaditana

Overview
Namerna1795
Unique Namerna1795
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length974
Alignment locationCM002458.1:151681..153223 -

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Properties
Property NameValue
ProductPUA-like domain protein
Orig transcript idgnl|cribi|Naga_100095g2.10166.mrna
Orig protein idgnl|cribi|Naga_100095g2.10166
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:151681..153223 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100095g2gene1724Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28874.1cds1791Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna1795rna1795-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna1795 ID=rna1795|Name=rna1795|organism=Nannochloropsis gaditana|type=mRNA|length=974bp
CCCTGTCCCCTTCCCTTCTACACGGGGGGGCGCGGGTCCTCCGACCTGTT
CTATTCCGAGCATTTGGAGGATATTCACGCCCTTCTAGAACGATCCAACG
CGGATTCGTACGTGGAAAGGATGGATCTCGAAGATTACCTCTTCCGATAC
GATCGAGGAGTGTTCTGGTTGGCCCAGACCTCCGCTGCCTCCATTCCCGT
CTTCCCTTTCCTCCAAGGCTGGTATTTCGCGCGCGGATCTCGCTCTCTCC
TCTCCCGGGTCTGTTGGCGTTGGCTTTTTTCATCCTCTTTCCTCTTCTCC
CTCCTGCACGCCGCCACGCCCGACCTACTGGCCTCCCGCCTCCTCCTCGT
TGCTCCTTGCCTCCCCGTCAACCAGGCCCCCGCCCTCCTCGCATTCCTTC
ACGCCACCCTTCCCCTCCCTCCCCCGGCCCCTCTCTACCTCCTTCCCCAG
CGGGGATCCTCGGTGCGTCAGCCTTTTGCCTCCCATGGTCATATCCACAC
GCTATTTTTGTCGGTGCATGTGTACGCCCGTTTGGGGAAAGGGGAGGCGC
AGGGACACACGCAACGTGTCGAGGCCTGGGTAGGCAAAAAAGGGGGAAGA
ACGGGTCTGTGCACGATGAATTACTGGGACAAGTCCGTGTTTTGGAGCGG
GTATCCCCTGTACGATTGGCGGGAATACGTGTACCTCCGGCACAAATATG
GCGCCGAGGGTGTTTTCCCTTCCCTGGAGGAGAAGGTGTGTTGGGAAGAA
GAAAAAGCAAAAAGCGGAAAAGGATGGATAGAGCGTTACTGGGAAGGAAG
GCGGAGGAAATTCTTGGGCATCCTGGTCTGAGAGAAGATGAAGCATAGGA
GAGAATAGATAGGCTGGTGAGAAGGGGGAAGGGTAAGAGGAATCGAACAA
GAGTTTTATAAAGCAAGTAATGGCTACTAAAGCACGTGGGAGACATAAAC
GGTTGTAAAGTGTTCTCAGTCAAA
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protein sequence of rna1795

>rna1795-protein ID=rna1795-protein|Name=rna1795|organism=Nannochloropsis gaditana|type=polypeptide|length=284bp
MPPKRKAKSIAGSSEAKTDLPAANSKRKGGTMSICSSPNKDSDNTAPQSR
KVHKAAGALSTAPLPPETTSKGSKVSSTRRYFLMKSEPDEFSVDDLAAQP
NQTGCWEGVRNYQARNLMRDHMHVGDQAFFYHSSCKVPGIVGIMEVSRAA
YPDHFQWDKGSKYYDAGSDREAPRWWMVDVTLQERLEEKVPLEVLREEAL
KPGCPLAGMALLQKGSRLSVQPVREEEWKFIHEKLIMAPKGTGVVREERG
EEGKTSSADGEGGKGEKKDEKRLGGKKKKRRTGT
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mRNA from alignment at CM002458.1:151681..153223-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna1795 ID=rna1795|Name=rna1795|organism=Nannochloropsis gaditana|type=mRNA|length=1543bp|location=Sequence derived from alignment at CM002458.1:151681..153223- (Nannochloropsis gaditana)
CTGCTTATTATGAGTTGGCTTATTGATAAATGTGTTGTGTCCTTTATTTG
CTTCGTACCCTACGTAGCGGGAATACTTCGACAATTGCTAACGGCACATG
CAACGTATTATACCCACATATAATGTACAAAGGCTTACGAGGGGAAGACA
TTCGACTAGCATTTCTATCGAAGATTCGATTATTATTGTTCGTGTAAATG
CACACGCACGGAAAGGCTAATACAGGGTGACGTCTTCACGACTGGAAGTT
GCAGGCGATTGCCACGCAACCAAAAAACATTTTTCGTTTTTTTACTGTCA
CCGTCACCATTTGTTTGTCTCTTTTGCTGATACAACTAGCCGTGGGTGTG
GCAGGTGCTAGTCGAAGACCTTGCATCCGCAATTCTCGGAGTATTGGCCA
CACGGTAACTCTCTCCTCGACGCGAGTGCTGTTCTTCCCCCCTGATATCA
CCTTCTGCGGGATGCCTCCCAAGCGTAAAGCCAAAAGCATCGCGGGCTCG
AGCGAAGCTAAGACCGATTTACCTGCCGCTAACAGCAAAAGAAAAGGAGG
CACAATGTCCATCTGCTCTTCTCCCAACAAGGACTCGGACAACACTGCGC
CTCAATCACGAAAGGTCCACAAGGCAGCTGGAGCGCTTTCCACGGCACCC
CTCCCTCCCGAAACAACTTCAAAAGGATCCAAGGTTTCTTCAACTCGACG
GTATTTTTTGATGAAAAGCGAACCCGACGAATTCAGTGTGGATGATCTGG
CAGCGCAACCCAATCAAACCGGTTGCTGGGAAGGTGTCCGCAATTATCAG
GCAAGGAATCTGATGCGTGACCATATGCACGTGGGTGACCAGGCTTTTTT
CTACCACTCTTCTTGCAAAGTTCCAGGCATTGTGGGGATCATGGAGGTGA
GTCGTGCTGCCTACCCGGACCATTTTCAATGGGACAAAGGCAGCAAGTAT
TATGATGCTGGCAGCGACCGGGAAGCCCCACGATGGTGGATGGTGGACGT
TACACTCCAAGAACGATTGGAAGAGAAAGTTCCCCTGGAGGTCTTGAGGG
AGGAGGCGCTGAAGCCAGGTTGCCCCTTGGCGGGGATGGCTTTGCTACAG
AAAGGGTCCCGGCTGAGCGTGCAGCCAGTCCGGGAGGAGGAATGGAAATT
CATTCACGAAAAGCTGATCATGGCCCCAAAAGGCACAGGGGTAGTCAGGG
AGGAACGAGGGGAAGAAGGGAAGACATCTTCCGCGGATGGAGAAGGAGGA
AAGGGTGAAAAAAAGGACGAGAAGAGATTAGGAGGGAAGAAAAAAAAGCG
GAGGACAGGAACGTGACAGGGCCTTTAAATCACATGATGACGGGGGGAAT
CTGGTGAAAGCGATGCAGCGAAGACAAGTGTTGTACGGAAAAGAGAAAAA
TATGGATTGAAAAGGAGGGACTAAAGGAGGAGAAAGATCTCGACCTCTAA
CAATCCCTCAAGCCATTGCCGTGGACGCCCCCCCACAGGGTGCTGATAAG
GTCCTATTTGACTGAGAACACTTTACAACCGTTTATGTCTCCC
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Coding sequence (CDS) from alignment at CM002458.1:151681..153223-

>rna1795 ID=rna1795|Name=rna1795|organism=Nannochloropsis gaditana|type=CDS|length=855bp|location=Sequence derived from alignment at CM002458.1:151681..153223- (Nannochloropsis gaditana)
ATGCCTCCCAAGCGTAAAGCCAAAAGCATCGCGGGCTCGAGCGAAGCTAA
GACCGATTTACCTGCCGCTAACAGCAAAAGAAAAGGAGGCACAATGTCCA
TCTGCTCTTCTCCCAACAAGGACTCGGACAACACTGCGCCTCAATCACGA
AAGGTCCACAAGGCAGCTGGAGCGCTTTCCACGGCACCCCTCCCTCCCGA
AACAACTTCAAAAGGATCCAAGGTTTCTTCAACTCGACGGTATTTTTTGA
TGAAAAGCGAACCCGACGAATTCAGTGTGGATGATCTGGCAGCGCAACCC
AATCAAACCGGTTGCTGGGAAGGTGTCCGCAATTATCAGGCAAGGAATCT
GATGCGTGACCATATGCACGTGGGTGACCAGGCTTTTTTCTACCACTCTT
CTTGCAAAGTTCCAGGCATTGTGGGGATCATGGAGGTGAGTCGTGCTGCC
TACCCGGACCATTTTCAATGGGACAAAGGCAGCAAGTATTATGATGCTGG
CAGCGACCGGGAAGCCCCACGATGGTGGATGGTGGACGTTACACTCCAAG
AACGATTGGAAGAGAAAGTTCCCCTGGAGGTCTTGAGGGAGGAGGCGCTG
AAGCCAGGTTGCCCCTTGGCGGGGATGGCTTTGCTACAGAAAGGGTCCCG
GCTGAGCGTGCAGCCAGTCCGGGAGGAGGAATGGAAATTCATTCACGAAA
AGCTGATCATGGCCCCAAAAGGCACAGGGGTAGTCAGGGAGGAACGAGGG
GAAGAAGGGAAGACATCTTCCGCGGATGGAGAAGGAGGAAAGGGTGAAAA
AAAGGACGAGAAGAGATTAGGAGGGAAGAAAAAAAAGCGGAGGACAGGAA
CGTGA
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Synonyms
Publications