EWM28874.1, cds1791 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28874.1 vs. NCBI_GenBank
Match: gi|585111306|gb|EWM28874.1| (PUA-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 587.03 bits (1512), Expect = 0.000e+0 Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0
Query: 1 MPPKRKAKSIAGSSEAKTDLPAANSKRKGGTMSICSSPNKDSDNTAPQSRKVHKAAGALSTAPLPPETTSKGSKVSSTRRYFLMKSEPDEFSVDDLAAQPNQTGCWEGVRNYQARNLMRDHMHVGDQAFFYHSSCKVPGIVGIMEVSRAAYPDHFQWDKGSKYYDAGSDREAPRWWMVDVTLQERLEEKVPLEVLREEALKPGCPLAGMALLQKGSRLSVQPVREEEWKFIHEKLIMAPKGTGVVREERGEEGKTSSADGEGGKGEKKDEKRLGGKKKKRRTGT 284
MPPKRKAKSIAGSSEAKTDLPAANSKRKGGTMSICSSPNKDSDNTAPQSRKVHKAAGALSTAPLPPETTSKGSKVSSTRRYFLMKSEPDEFSVDDLAAQPNQTGCWEGVRNYQARNLMRDHMHVGDQAFFYHSSCKVPGIVGIMEVSRAAYPDHFQWDKGSKYYDAGSDREAPRWWMVDVTLQERLEEKVPLEVLREEALKPGCPLAGMALLQKGSRLSVQPVREEEWKFIHEKLIMAPKGTGVVREERGEEGKTSSADGEGGKGEKKDEKRLGGKKKKRRTGT
Sbjct: 1 MPPKRKAKSIAGSSEAKTDLPAANSKRKGGTMSICSSPNKDSDNTAPQSRKVHKAAGALSTAPLPPETTSKGSKVSSTRRYFLMKSEPDEFSVDDLAAQPNQTGCWEGVRNYQARNLMRDHMHVGDQAFFYHSSCKVPGIVGIMEVSRAAYPDHFQWDKGSKYYDAGSDREAPRWWMVDVTLQERLEEKVPLEVLREEALKPGCPLAGMALLQKGSRLSVQPVREEEWKFIHEKLIMAPKGTGVVREERGEEGKTSSADGEGGKGEKKDEKRLGGKKKKRRTGT 284
BLAST of EWM28874.1 vs. NCBI_GenBank
Match: gi|1004135268|gb|KXZ43333.1| (hypothetical protein GPECTOR_94g655 [Gonium pectorale]) HSP 1 Score: 206.838 bits (525), Expect = 3.234e-61 Identity = 96/152 (63.16%), Postives = 114/152 (75.00%), Query Frame = 0
Query: 80 RYFLMKSEPDEFSVDDLAAQPNQTGCWEGVRNYQARNLMRDHMHVGDQAFFYHSSCKVPGIVGIMEVSRAAYPDHFQWDKGSKYYDAGSDREAPRWWMVDVTLQERLEEKVPLEVLREEALKPGCPLAGMALLQKGSRLSVQPVREEEWKFI 231
RYFLMKSEP+EFS+DDL+A+PN T CWEGVRN QARN+MR M +GDQAFFYHSSCKVP +VG++EV R AYPDH +DK SKYYD S +AP+WWMVDV L R V L LR E + G P+A M L+ K SRLSVQPV E+W+ +
Sbjct: 121 RYFLMKSEPEEFSLDDLSAKPNSTSCWEGVRNAQARNIMR-SMKLGDQAFFYHSSCKVPAVVGLVEVVREAYPDHTAFDKSSKYYDPRSTPDAPKWWMVDVRLVRRAVRPVTLAELRAEGARAGSPVASMVLINK-SRLSVQPVTPEQWERV 270
BLAST of EWM28874.1 vs. NCBI_GenBank
Match: gi|460163433|gb|EMI17679.1| (protein belonging to Uncharacterized protein family UPF0310 [Rhodopirellula maiorica SM1]) HSP 1 Score: 197.978 bits (502), Expect = 6.000e-60 Identity = 96/171 (56.14%), Postives = 124/171 (72.51%), Query Frame = 0
Query: 69 TSKGSKVSSTRRYFLMKSEPDEFSVDDLAAQPNQTGCWEGVRNYQARNLMRDHMHVGDQAFFYHSSCKVPGIVGIMEVSRAAYPDHFQWDKGSKYYDAGSDREAPRWWMVDVTLQERLEEKVPLEVLREEALKPGCPLAGMALLQKGSRLSVQPVREEEWKFIHEKLIMAP 239
T+K + T Y+LMKSEP FS+DDLA QP+QT CWEGVRNYQARN++RD + VGD+ FYHS+CKVP +VG VS++ YPD FQ+D+ SKY+D SD E PRW++VD+ L+++ + V L LRE A L GM LLQKGSRLSVQPV+++E++ I EKL P
Sbjct: 24 TAKDLFHAMTINYWLMKSEPTTFSIDDLADQPDQTTCWEGVRNYQARNMLRDDIQVGDRVLFYHSACKVPAVVGTAVVSKSGYPDPFQFDRKSKYFDEKSDPENPRWYLVDIKLEKKFDRPVTLAELRERA-----GLKGMVLLQKGSRLSVQPVKKKEFETI-EKLASKP 188
BLAST of EWM28874.1 vs. NCBI_GenBank
Match: gi|494543466|ref|WP_007328178.1| (EVE domain-containing protein [Rhodopirellula baltica] >gi|327539167|gb|EGF25795.1| protein belonging to uncharacterized protein family UPF0310 [Rhodopirellula baltica WH47] >gi|436438729|gb|ELP32254.1| protein belonging to uncharacterized protein family UPF0310 [Rhodopirellula baltica SWK14]) HSP 1 Score: 195.667 bits (496), Expect = 1.983e-59 Identity = 87/149 (58.39%), Postives = 110/149 (73.83%), Query Frame = 0
Query: 80 RYFLMKSEPDEFSVDDLAAQPNQTGCWEGVRNYQARNLMRDHMHVGDQAFFYHSSCKVPGIVGIMEVSRAAYPDHFQWDKGSKYYDAGSDREAPRWWMVDVTLQERLEEKVPLEVLREEALKPGCPLAGMALLQKGSRLSVQPVREEEW 228
+Y+LMK+EP+ FS+DDLA QP Q CWEGVRNYQARNL+RD + GDQ FYHS+CK P +VG+ VSR YPDH +DK S Y+D S+ ++P W+MVD+ L ++LE V L LREEA K PL M LLQKGSRLSVQPV ++++
Sbjct: 2 KYWLMKTEPNTFSIDDLAEQPEQITCWEGVRNYQARNLLRDEIEEGDQVLFYHSACKTPAVVGLATVSRGGYPDHHAFDKKSHYFDPKSNPDSPTWYMVDIKLNKKLERPVTLAELREEATKARSPLVDMVLLQKGSRLSVQPVTKKQF 150
BLAST of EWM28874.1 vs. NCBI_GenBank
Match: gi|494552619|ref|WP_007332253.1| (EVE domain-containing protein [Rhodopirellula baltica] >gi|32475480|ref|NP_868474.1| hypothetical protein RB8644 [Rhodopirellula baltica SH 1] >gi|32446022|emb|CAD75838.1| conserved hypothetical protein [Rhodopirellula baltica SH 1] >gi|408497660|gb|EKK02180.1| protein belonging to uncharacterized protein family UPF0310 [Rhodopirellula baltica SH28]) HSP 1 Score: 195.282 bits (495), Expect = 2.386e-59 Identity = 87/149 (58.39%), Postives = 110/149 (73.83%), Query Frame = 0
Query: 80 RYFLMKSEPDEFSVDDLAAQPNQTGCWEGVRNYQARNLMRDHMHVGDQAFFYHSSCKVPGIVGIMEVSRAAYPDHFQWDKGSKYYDAGSDREAPRWWMVDVTLQERLEEKVPLEVLREEALKPGCPLAGMALLQKGSRLSVQPVREEEW 228
+Y+LMK+EP+ FS+DDLA QP Q CWEGVRNYQARNL+RD + GDQ FYHS+CK P +VG+ VSR YPDH +DK S Y+D S+ ++P W+MVD+ L ++LE V L LREEA K PL M LLQKGSRLSVQPV ++++
Sbjct: 2 KYWLMKTEPNTFSIDDLAEQPEQITCWEGVRNYQARNLLRDEIEEGDQVLFYHSACKTPAVVGLATVSRGGYPDHHAFDKKSHYFDPKSNPDSPTWYMVDIKLNKKLERPVTLAELREEATKARSPLVDMVLLQKGSRLSVQPVSKKQF 150
BLAST of EWM28874.1 vs. NCBI_GenBank
Match: gi|750487443|ref|WP_040769314.1| (EVE domain-containing protein [Rhodopirellula maiorica]) HSP 1 Score: 195.282 bits (495), Expect = 2.662e-59 Identity = 93/159 (58.49%), Postives = 119/159 (74.84%), Query Frame = 0
Query: 81 YFLMKSEPDEFSVDDLAAQPNQTGCWEGVRNYQARNLMRDHMHVGDQAFFYHSSCKVPGIVGIMEVSRAAYPDHFQWDKGSKYYDAGSDREAPRWWMVDVTLQERLEEKVPLEVLREEALKPGCPLAGMALLQKGSRLSVQPVREEEWKFIHEKLIMAP 239
Y+LMKSEP FS+DDLA QP+QT CWEGVRNYQARN++RD + VGD+ FYHS+CKVP +VG VS++ YPD FQ+D+ SKY+D SD E PRW++VD+ L+++ + V L LRE A L GM LLQKGSRLSVQPV+++E++ I EKL P
Sbjct: 3 YWLMKSEPTTFSIDDLADQPDQTTCWEGVRNYQARNMLRDDIQVGDRVLFYHSACKVPAVVGTAVVSKSGYPDPFQFDRKSKYFDEKSDPENPRWYLVDIKLEKKFDRPVTLAELRERA-----GLKGMVLLQKGSRLSVQPVKKKEFETI-EKLASKP 155
BLAST of EWM28874.1 vs. NCBI_GenBank
Match: gi|495934402|ref|WP_008658981.1| (EVE domain-containing protein [Rhodopirellula europaea] >gi|448884898|gb|EMB15366.1| protein belonging to Uncharacterized protein family UPF0310 [Rhodopirellula europaea 6C]) HSP 1 Score: 193.741 bits (491), Expect = 9.596e-59 Identity = 86/149 (57.72%), Postives = 109/149 (73.15%), Query Frame = 0
Query: 80 RYFLMKSEPDEFSVDDLAAQPNQTGCWEGVRNYQARNLMRDHMHVGDQAFFYHSSCKVPGIVGIMEVSRAAYPDHFQWDKGSKYYDAGSDREAPRWWMVDVTLQERLEEKVPLEVLREEALKPGCPLAGMALLQKGSRLSVQPVREEEW 228
+Y+LMK+EP FS+DDL QP+Q CWEGVRNYQARNL+RD + GDQ FYHS+CK P +VG+ VSR YPDH +DK S Y+D S+ ++P W+MVD+ L ++LE V L LREEA K PL M LLQKGSRLSVQPV ++++
Sbjct: 2 KYWLMKTEPTTFSIDDLVEQPDQITCWEGVRNYQARNLLRDEIEEGDQVLFYHSACKTPAVVGLATVSRGGYPDHHAFDKKSHYFDPKSNPDSPTWYMVDIKLNKKLERPVTLAELREEATKARSPLVDMVLLQKGSRLSVQPVTKKQF 150
BLAST of EWM28874.1 vs. NCBI_GenBank
Match: gi|836667878|ref|WP_047815850.1| (EVE domain-containing protein [Rhodopirellula islandica]) HSP 1 Score: 193.356 bits (490), Expect = 1.707e-58 Identity = 84/149 (56.38%), Postives = 112/149 (75.17%), Query Frame = 0
Query: 80 RYFLMKSEPDEFSVDDLAAQPNQTGCWEGVRNYQARNLMRDHMHVGDQAFFYHSSCKVPGIVGIMEVSRAAYPDHFQWDKGSKYYDAGSDREAPRWWMVDVTLQERLEEKVPLEVLREEALKPGCPLAGMALLQKGSRLSVQPVREEEW 228
+Y+LMK+EP+ F++DDLA QP+Q CWEGVRNYQARNL+RD + GD+ FYHS+CK P +VG+ VSR YPDH WDK S Y+D S ++P W+MVD+ L+++L+ V L LREEA + G PL M LL+KGSRLSVQPV ++++
Sbjct: 2 KYWLMKTEPNTFNIDDLAEQPDQITCWEGVRNYQARNLLRDEIEEGDRVLFYHSACKTPAVVGLATVSRGGYPDHHAWDKKSHYFDPKSTPDSPTWFMVDIQLEKKLDRPVTLAELREEATQAGSPLVDMMLLRKGSRLSVQPVTKKQF 150
BLAST of EWM28874.1 vs. NCBI_GenBank
Match: gi|517546319|ref|WP_018716527.1| (EVE domain-containing protein [Arhodomonas aquaeolei]) HSP 1 Score: 190.66 bits (483), Expect = 1.438e-57 Identity = 91/153 (59.48%), Postives = 108/153 (70.59%), Query Frame = 0
Query: 81 YFLMKSEPDEFSVDDLAAQPNQTGCWEGVRNYQARNLMRDHMHVGDQAFFYHSSCKVPGIVGIMEVSRAAYPDHFQWDKGSKYYDAGSDREAPRWWMVDVTLQERLEEKVPLEVLREEALKPGCPLAGMALLQKGSRLSVQPVREEEWKFIHE 233
Y+LMKSEPD + +DDLAA+P+QT W+GVRNYQ RN+MRD M GD AFFYHS+ KVPGI GIME+ YPDH WD S YYD SD + PRW+MVDV Q RLE +PL L+ E L+ MAL++KG+RLSV PVRE EW I E
Sbjct: 3 YWLMKSEPDVYGIDDLAAEPDQTDHWDGVRNYQVRNMMRDRMQPGDLAFFYHSNTKVPGIAGIMEIVSTGYPDHTAWDPESNYYDPKSDPDNPRWYMVDVRFQRRLERLIPLSELKAEP-----ALSEMALVKKGNRLSVMPVREAEWTAILE 150
BLAST of EWM28874.1 vs. NCBI_GenBank
Match: gi|739393469|ref|WP_037254040.1| (EVE domain-containing protein [Rhodopirellula europaea]) HSP 1 Score: 190.66 bits (483), Expect = 1.692e-57 Identity = 85/149 (57.05%), Postives = 108/149 (72.48%), Query Frame = 0
Query: 80 RYFLMKSEPDEFSVDDLAAQPNQTGCWEGVRNYQARNLMRDHMHVGDQAFFYHSSCKVPGIVGIMEVSRAAYPDHFQWDKGSKYYDAGSDREAPRWWMVDVTLQERLEEKVPLEVLREEALKPGCPLAGMALLQKGSRLSVQPVREEEW 228
+Y+LMK+EP FS+DDL QP+Q CWEGVRNYQARNL+RD + GDQ FYHS+CK P +VG+ VSR YPDH +DK S Y+D S+ ++P W+MVD+ L ++LE V L LREEA K L M LLQKGSRLSVQPV ++++
Sbjct: 2 KYWLMKTEPTTFSIDDLVEQPDQITCWEGVRNYQARNLLRDEIEEGDQVLFYHSACKTPAVVGLATVSRGGYPDHHAFDKKSHYFDPKSNPDSPTWYMVDIKLNKKLERPVTLAELREEATKARSALVDMVLLQKGSRLSVQPVTKKQF 150 The following BLAST results are available for this feature:
BLAST of EWM28874.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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