rna1785, rna1785 (mRNA) Nannochloropsis gaditana

Overview
Namerna1785
Unique Namerna1785
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length746
Alignment locationCM002458.1:118801..119057 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102723g1.2566.mrna
Orig protein idgnl|cribi|Naga_102723g1.2566
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:118801..119057 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102723g1gene1715Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28892.1cds1781Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna1785rna1785-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna1785 ID=rna1785|Name=rna1785|organism=Nannochloropsis gaditana|type=mRNA|length=746bp
TTCCTCCCTCCCCTCCTTCCCTCCCTCCCCTCCTTCCCTTCCTCCTTCGA
CGGCCCCGTTCGTTCCTTTCGCCTCCGCACACTCTTCGCTTCCCTTCCTC
CCCCTTTCCCCCTCCCTCCTTCCCCCCTCCAGCTCTACAACGATTTTTTC
GGCCCTCCCATGAGGGTCATCGAGGAGGAGGGTGAGGCCATATCCCTCCA
AGGCCTTCCTCCCTCGTCCTCTTTCCCCCCCGCGCACCGTCCCTACCGTG
CCTCTTCCCAAGAATACTACGAAAGTGGCGCCCTGCCCCAGCTCTTGCGA
GGGCTTTGCATCTATCTGCACGAAACGTTGCGACCGCTGGTCATTCAAGA
GGTCTCGTGTCCCCGCTTTCCTCCCCCTCTCCTTCCGGCCCTCCTTCCCG
CCCTCCCTTTCTTGCTTTCTCCCCTCACTTATCCTTAGAAACGTCCCTTT
CGCTCTTTGGTGCTCTAGCCATACCGGCCGGTTCGACTCTCTCCTCCCTC
CCCTCGTTCCCTCCAGTGAACGCGGCTTTGCGCCATTTCCATCGCCCTTC
GTCGCGATATCCCCATCTTCCCTCGCTTCCTCTCACATTCCTTCACCTTC
TCATCTGTCACCCTCCTTCCCTCCTTCCCACCCTTCCTCCCTCCCCCCTT
GCTGCGCTCGTGCAGGGTGACCTAGATAATCTGTGTACGCTCATTCACGT
GGCGCGAGAGGATGTTATCCAAGGTCAAATGCCCTTGCGAGGTAAA
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protein sequence of rna1785

>rna1785-protein ID=rna1785-protein|Name=rna1785|organism=Nannochloropsis gaditana|type=polypeptide|length=69bp
MEFFDELERLGPLLGVGGSLFSAKDVPRASTGEGKGIFPRMGGRVGGREG
PGRGGGREGGVGGGVEEEG
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mRNA from alignment at CM002458.1:118801..119057-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna1785 ID=rna1785|Name=rna1785|organism=Nannochloropsis gaditana|type=mRNA|length=257bp|location=Sequence derived from alignment at CM002458.1:118801..119057- (Nannochloropsis gaditana)
CTCCCCAGCGGTCGCTCGAGCAACGCAAGTCCCTCTTGGCCGGGCCGATG
GAATTTTTCGACGAGTTGGAGCGCCTTGGGCCCCTTTTGGGGGTAGGAGG
CAGCCTCTTCAGTGCGAAAGATGTGCCGCGTGCATCCACGGGGGAGGGCA
AAGGAATTTTTCCGCGGATGGGAGGAAGGGTGGGAGGTAGGGAGGGACCA
GGACGGGGGGGAGGGCGGGAGGGAGGGGTAGGGGGTGGAGTGGAAGAAGA
GGGATAG
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Coding sequence (CDS) from alignment at CM002458.1:118801..119057-

>rna1785 ID=rna1785|Name=rna1785|organism=Nannochloropsis gaditana|type=CDS|length=210bp|location=Sequence derived from alignment at CM002458.1:118801..119057- (Nannochloropsis gaditana)
ATGGAATTTTTCGACGAGTTGGAGCGCCTTGGGCCCCTTTTGGGGGTAGG
AGGCAGCCTCTTCAGTGCGAAAGATGTGCCGCGTGCATCCACGGGGGAGG
GCAAAGGAATTTTTCCGCGGATGGGAGGAAGGGTGGGAGGTAGGGAGGGA
CCAGGACGGGGGGGAGGGCGGGAGGGAGGGGTAGGGGGTGGAGTGGAAGA
AGAGGGATAG
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Synonyms
Publications