EWM28892.1, cds1781 (CDS) Nannochloropsis gaditana

Overview
NameEWM28892.1
Unique Namecds1781
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:118801..119010 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28892.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102723g1.2566.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:118801..119010 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28892.1 vs. NCBI_GenBank
Match: gi|585111328|gb|EWM28892.1| (hypothetical protein Naga_102723g1 [Nannochloropsis gaditana])

HSP 1 Score: 123.635 bits (309), Expect = 1.030e-35
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 
Query:    1 MEFFDELERLGPLLGVGGSLFSAKDVPRASTGEGKGIFPRMGGRVGGREGPGRGGGREGGVGGGVEEEG 69
            MEFFDELERLGPLLGVGGSLFSAKDVPRASTGEGKGIFPRMGGRVGGREGPGRGGGREGGVGGGVEEEG
Sbjct:    1 MEFFDELERLGPLLGVGGSLFSAKDVPRASTGEGKGIFPRMGGRVGGREGPGRGGGREGGVGGGVEEEG 69
The following BLAST results are available for this feature:
BLAST of EWM28892.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111328|gb|EWM28892.1|1.030e-35100.00hypothetical protein Naga_102723g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1785rna1785Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications