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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100895g4.9479.mrna |
| Orig protein id | gnl|cribi|Naga_100895g4.9479 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:107855..109780 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1781 ID=rna1781|Name=rna1781|organism=Nannochloropsis gaditana|type=mRNA|length=1567bp
CCCTCCCTGAAAACCCGGCCGGGACTGGATTTGGCAGAGTTAAGGTAGAG
GACCGAGGGGCCAAGCGAGCGCGGGAGGAAATGGCAGAGGGCGGGGAAGA
GGAGGGGGAGAGGTTCGGAAAAGGAAGAGGAGAGGAAGGAGAAGGTTATG
AGAGGGAGAGCGGGCCTGGAGAGGAGGGAGGGGAAGATGGGCAAGAGGGA
GGGGGCGGAGGGGGAGAAAGGGACGGGAAGCCGTCTAGAGCCCTCCCTGC
CTCTTCCGCCTTCAGCACCTCTTCCTCCTCCTCCTCGACGTCCAGCATGA
CCGTGGTCGCGACGGGGATGGAAGGGGAGGAGGGGGAGGAGGGGGGGACG
GCGGACAGCCGGCTCGCCAAGCGGGAAGGGAGGGAAGGGAGGAGGGAGAC
ACGGAGGGCGCTGGACAAGGAAGATGAAGGGGCAGAAGGGCTGTTGATGT
TGAAATTTTTGCGGGAGAAAGTGGAGAACCCACCTCGGGGAAAAGGACGA
GCGAAAGAGGGAGATAGGAGTCCAGCTGCACCAGCCGCCGGGAGCATGGC
ATGACTCACCCCATGCAATCCTGACGGGGAAGTTGAATGGATGCTGTGAA
ATCTTATTCGGAAAGCGGGTGGAACAGATTTGAATTGCACAGCGTTTTGG
TTGGAGGCGGGTGCTTCTTGAGCTCGAAAAGGAGAGGGAGGAGCAGGGGA
GGAAAGTCGGGCTTGTGAACGCTTTCAAACCATGTTTATTTTTTAGAAAA
GACAGGGATATTTCCTCCTGTTGCAGACAATGTACAAAGACGCCGTCGCC
TGGCCAAGGCGTGGAGACGCACGCGAAATGGCGCCGGAGCACACGTAGTT
AGACGGCTTCGTTAAATTCTTGCAGACCCAAACTTGTTTTTTGGCGGGCA
TGGACTGCTAAGGGCTTCAATGACTTGTTTTTTGGCAGGCATGGACTGCT
AAGGGCTTCAATAATGGGTTGAGGATGGGTATTGCCAGGAGCCACGGGAA
CAATGCCGCCACATTACCATGCATCGGTAGCGGCAAGAGTAGCGATTCAA
CCTGTTTTATGCTGATCTTGTTTTTTTTAAATAGCCATATTTTTTCACGA
TGAACCGTGCTTCAATGCAAGGAAGATGCGAAGGCATGAGGCGGGCGAGA
AGAAATCAGTAGGCATCGACAGGGGTATAGATTAAGAGTATAAGACGAGA
TGTACAGCATGAAAAGTGTGTTTGGGTGAAGGATGGTTGGGTGAGATAGC
GAGATGTATGCGACGGCTATTGAGAGGCATGCCTGCTGCATTTGTAAGGC
GGCCACACACATTAGGAGCTTCCCTCCCATGTCTGCACCTTTCCTATAGC
CTGAATACCCGGGCGATGTGTAGCGGTCACGAAGACCGTGTTTATCGATT
GTTAATTTGTTGAATAATTTCCGCACTTTTTGCTTTCAAAGAAACATGAA
ACGATTAAATGTGACGGGGATGCATTCAGATCCTTGGGCCGTGATTTTTC
CTTATCTGATATCGCGAAAAGTGGGTCGATGTCCGAATCAAGGCGAGCAA
ATGTTATGGCTAAGACG back to topprotein sequence of rna1781 >rna1781-protein ID=rna1781-protein|Name=rna1781|organism=Nannochloropsis gaditana|type=polypeptide|length=326bp
MDASTISSSSPSSFLVSSTASSASSTSSPSSSSPLELSLEFPTLLDNMDV
MFQRAHDGAKTCKAFSTFLQQSAVLEEGYGSSIVKVGEAFAGIQESNAPS
VVAATAGASASIQALGRQHVGLANTLSQDVCKSLGAYVDQQSAMLRGMIQ
EVHALVEDLEKEKAAHKKIRDKHKKACKEAEGVLKKGGALSLPPVPPPLS
QLPDAIDVAVAAPPSLPSSLPPSLPPSTAADPISGPDHSDATSSPIPPSA
PPSVPAVSSSILRLQDRAQEALFDLRAMEKEYQTSKNRMEGKEEAFRRAL
REHLGRFQVQEEARALFVKQQLQRPP back to topmRNA from alignment at CM002458.1:107855..109780+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1781 ID=rna1781|Name=rna1781|organism=Nannochloropsis gaditana|type=mRNA|length=1926bp|location=Sequence derived from alignment at CM002458.1:107855..109780+ (Nannochloropsis gaditana)
ATGGACGCTTCAACAATATCAtcttcatccccttcctcctttttggtGTC
CTCCACTGCGTCCTCTGCGTCATCCACATCCTCgccatcttcatcttcaC
CGCTGGAGCTCTCGCTTGAGTTTCCGACGCTCTTGGACAACATGGATGTC
ATGTTCCAACGTGCGCATGACGGCGCAAAGACATGTAAGGCGTTCTCCAC
ATTCTTGCAACAAAGTGCCgttctggaggagggatatgGAAGCTCAATTG
TCAAGGTAGGCTCTATGACTCAATCAAAATGCGCCAACTAGGTGCAATAA
ACGAAatggaaggcaaaggaagcGGGAAAATATGACAGGAACATTGAATA
ATCCTCGGCATACCAAGTATGTTTTTCACTCCCGGCTTCGCTTCGCTCTT
ATGTCCCGCTATCCATATTTCTGTCAAGATTTTCACTCCCTctttatccc
tccctcgcttttaCTTGGCCTTGGCTCTCCCTATCCTCAGGTCGGGGAGG
CTTTCGCGGGCATTCAAGAATCCAATGCCCCGTCAGTGGTGGCGGCAACC
GCAGGAGCCAGTGCGTCCATTCAAGCCCTCGGTCGGCAGCATGTGGGTCT
GGCCAACACACTCTCTCAAGACGTCTGTAAAAGCTTGGGTGCCTACGTGG
ATCAGCAGTCTGCGATGCTTCGAGGGATGATCCAGGAAGTGCACGCCCTG
GTGGAGGAtctggagaaagaaaaagcggccCATAAAAAGATCCGAGACAA
GCACAAAAAAGCTTGCAAGGAGGCTGAAGGCGTCttgaaaaaaggagggg
ccTTGTCTTTGCCCCCCGTGCCTCCCCCTTTGTCGCAACTCCCGGACGCG
ATCGATGTCGCGGTCGcggcccctccttcactcccttcctccctccctcc
ctccctccctccctcgaccgcGGCGGACCCAATCAGTGGCCCCGACCACA
GCGACGCCacgtcctctcccatccctccttctgccccgccctcggtcccA
GCCGTGTCAAGCTCCATATTGCGCCTCCAGGATCGGGCGCAGGAGGCTTT
GTTCGATTTGCGCGCCATGGAAAAGGAGTACCAGACCTCCAAGAacagga
tggaaggaaaagaggaggccTTTCGTCGTGCCTTACGGGAGCATTTGGGC
CGCTTCCAGGTGGGAATGAGAAGgaacaaaggagggaggggaggagagcg
ggagaaaagtgagaagggaagacgTGAGAGACCGAGCGTGCCTTCTGTAG
AGACATCGTTGCCGCTGTAACCGcgatgcccctccctccctccctccctc
cctcctccctttcttccccctctaccaGGTCCAGGAGGAAGCCCGCGCTC
TCTTCGTCAAGCAGCAATTGCAGCGGGTAGGGGCCGCCCGGGGGGCCATG
CTCACCCTGTTTGAAAAGACcctgcacgtcctccaggaACAGATCGACGC
CATCGACCCCGCCGCCGACATGGCGGCTCACTCGCGGCAGGTTTtggccc
ttccccccccctccgctatccccgtcccgccctcggtcctggagctggag
gaggacggggcatTGGCGTTGAAACGTCGCGTGGCTCCCGGGGTGCAGCA
CGTGGAAAAATGCATCAAAAAATTGCGGGCCTTGTGCCAGGCGTTCTctg
ccttggccgccgcggAAGAGGTACGTCTTTCTGCCTCCTGGTGGAATCCT
GAGGGTGGCAGGCCCCTTTCTATTTTTCCCGCAATTTCCTCGTTTCTTTT
CTCGGTTTTGTGGGCCCCTGgatcccccccggccccccctcTCGGAAAGC
GGCTGGATCATTCCGACCCAGcactcactccctctccccttcccccttct
ccccttcttcccctctttccctctttccctccctaactccctccctccct
caagagCTACGCCAAAGCCACCCTGA back to topCoding sequence (CDS) from alignment at CM002458.1:107855..109780+ >rna1781 ID=rna1781|Name=rna1781|organism=Nannochloropsis gaditana|type=CDS|length=3924bp|location=Sequence derived from alignment at CM002458.1:107855..109780+ (Nannochloropsis gaditana)
ATGGACGCTTCAACAATATCAtcttcatccccttcctcctttttggtGTC
CTCCACTGCGTCCTCTGCGTCATCCACATCCTCgccatcttcatcttcaC
CGCTGGAGCTCTCGCTTGAGTTTCCGACGCTCTTGGACAACATGGATGTC
ATGTTCCAACGTGCGCATGACGGCGCAAAGACATGTAAGGCGTTCTCCAC
ATTCTTGCAACAAAGTGCCgttctggaggagggatatgGAAGCTCAATTG
TCAAGGTCGGGGAGGCTTTCGCGGGCATTCAAGAATCCAATGCCCCGTCA
GTGGTGGCGGCAACCGCAGGAGCCAGTGCGTCCATTCAAGCCCTCGGTCG
GCAGCATGTGGGTCTGGCCAACACACTCTCTCAAGACGTCTGTAAAAGCT
TGGGTGCCTACGTGGATCAGCAGTCTGCGATGCTTCGAGGGATGATCCAG
GAAGTGCACGCCCTGGTGGAGGAtctggagaaagaaaaagcggccCATAA
AAAGATCCGAGACAAGCACAAAAAAGCTTGCAAGGAGGCTGAAGGCGTCt
tgaaaaaaggaggggccTTGTCTTTGCCCCCCGTGCCTCCCCCTTTGTCG
CAACTCCCGGACGCGATCGATGTCGCGGTCGcggcccctccttcactccc
ttcctccctccctccctccctccctccctcgaccgcGGCGGACCCAATCA
GTGGCCCCGACCACAGCGACGCCacgtcctctcccatccctccttctgcc
ccgccctcggtcccAGCCGTGTCAAGCTCCATATTGCGCCTCCAGGATCG
GGCGCAGGAGGCTTTGTTCGATTTGCGCGCCATGGAAAAGGAGTACCAGA
CCTCCAAGAacaggatggaaggaaaagaggaggccTTTCGTCGTGCCTTA
CGGGAGCATTTGGGCCGCTTCCAGGTCCAGGAGGAAGCCCGCGCTCTCTT
CGTCAAGCAGCAATTGCAGCGGCCACCCTGAATGGACGCTTCAACAATAT
CAtcttcatccccttcctcctttttggtGTCCTCCACTGCGTCCTCTGCG
TCATCCACATCCTCgccatcttcatcttcaCCGCTGGAGCTCTCGCTTGA
GTTTCCGACGCTCTTGGACAACATGGATGTCATGTTCCAACGTGCGCATG
ACGGCGCAAAGACATGTAAGGCGTTCTCCACATTCTTGCAACAAAGTGCC
gttctggaggagggatatgGAAGCTCAATTGTCAAGGTCGGGGAGGCTTT
CGCGGGCATTCAAGAATCCAATGCCCCGTCAGTGGTGGCGGCAACCGCAG
GAGCCAGTGCGTCCATTCAAGCCCTCGGTCGGCAGCATGTGGGTCTGGCC
AACACACTCTCTCAAGACGTCTGTAAAAGCTTGGGTGCCTACGTGGATCA
GCAGTCTGCGATGCTTCGAGGGATGATCCAGGAAGTGCACGCCCTGGTGG
AGGAtctggagaaagaaaaagcggccCATAAAAAGATCCGAGACAAGCAC
AAAAAAGCTTGCAAGGAGGCTGAAGGCGTCttgaaaaaaggaggggccTT
GTCTTTGCCCCCCGTGCCTCCCCCTTTGTCGCAACTCCCGGACGCGATCG
ATGTCGCGGTCGcggcccctccttcactcccttcctccctccctccctcc
ctccctccctcgaccgcGGCGGACCCAATCAGTGGCCCCGACCACAGCGA
CGCCacgtcctctcccatccctccttctgccccgccctcggtcccAGCCG
TGTCAAGCTCCATATTGCGCCTCCAGGATCGGGCGCAGGAGGCTTTGTTC
GATTTGCGCGCCATGGAAAAGGAGTACCAGACCTCCAAGAacaggatgga
aggaaaagaggaggccTTTCGTCGTGCCTTACGGGAGCATTTGGGCCGCT
TCCAGGTCCAGGAGGAAGCCCGCGCTCTCTTCGTCAAGCAGCAATTGCAG
CGGCCACCCTGAATGGACGCTTCAACAATATCAtcttcatccccttcctc
ctttttggtGTCCTCCACTGCGTCCTCTGCGTCATCCACATCCTCgccat
cttcatcttcaCCGCTGGAGCTCTCGCTTGAGTTTCCGACGCTCTTGGAC
AACATGGATGTCATGTTCCAACGTGCGCATGACGGCGCAAAGACATGTAA
GGCGTTCTCCACATTCTTGCAACAAAGTGCCgttctggaggagggatatg
GAAGCTCAATTGTCAAGGTCGGGGAGGCTTTCGCGGGCATTCAAGAATCC
AATGCCCCGTCAGTGGTGGCGGCAACCGCAGGAGCCAGTGCGTCCATTCA
AGCCCTCGGTCGGCAGCATGTGGGTCTGGCCAACACACTCTCTCAAGACG
TCTGTAAAAGCTTGGGTGCCTACGTGGATCAGCAGTCTGCGATGCTTCGA
GGGATGATCCAGGAAGTGCACGCCCTGGTGGAGGAtctggagaaagaaaa
agcggccCATAAAAAGATCCGAGACAAGCACAAAAAAGCTTGCAAGGAGG
CTGAAGGCGTCttgaaaaaaggaggggccTTGTCTTTGCCCCCCGTGCCT
CCCCCTTTGTCGCAACTCCCGGACGCGATCGATGTCGCGGTCGcggcccc
tccttcactcccttcctccctccctccctccctccctccctcgaccgcGG
CGGACCCAATCAGTGGCCCCGACCACAGCGACGCCacgtcctctcccatc
cctccttctgccccgccctcggtcccAGCCGTGTCAAGCTCCATATTGCG
CCTCCAGGATCGGGCGCAGGAGGCTTTGTTCGATTTGCGCGCCATGGAAA
AGGAGTACCAGACCTCCAAGAacaggatggaaggaaaagaggaggccTTT
CGTCGTGCCTTACGGGAGCATTTGGGCCGCTTCCAGGTCCAGGAGGAAGC
CCGCGCTCTCTTCGTCAAGCAGCAATTGCAGCGGCCACCCTGAATGGACG
CTTCAACAATATCAtcttcatccccttcctcctttttggtGTCCTCCACT
GCGTCCTCTGCGTCATCCACATCCTCgccatcttcatcttcaCCGCTGGA
GCTCTCGCTTGAGTTTCCGACGCTCTTGGACAACATGGATGTCATGTTCC
AACGTGCGCATGACGGCGCAAAGACATGTAAGGCGTTCTCCACATTCTTG
CAACAAAGTGCCgttctggaggagggatatgGAAGCTCAATTGTCAAGGT
CGGGGAGGCTTTCGCGGGCATTCAAGAATCCAATGCCCCGTCAGTGGTGG
CGGCAACCGCAGGAGCCAGTGCGTCCATTCAAGCCCTCGGTCGGCAGCAT
GTGGGTCTGGCCAACACACTCTCTCAAGACGTCTGTAAAAGCTTGGGTGC
CTACGTGGATCAGCAGTCTGCGATGCTTCGAGGGATGATCCAGGAAGTGC
ACGCCCTGGTGGAGGAtctggagaaagaaaaagcggccCATAAAAAGATC
CGAGACAAGCACAAAAAAGCTTGCAAGGAGGCTGAAGGCGTCttgaaaaa
aggaggggccTTGTCTTTGCCCCCCGTGCCTCCCCCTTTGTCGCAACTCC
CGGACGCGATCGATGTCGCGGTCGcggcccctccttcactcccttcctcc
ctccctccctccctccctccctcgaccgcGGCGGACCCAATCAGTGGCCC
CGACCACAGCGACGCCacgtcctctcccatccctccttctgccccgccct
cggtcccAGCCGTGTCAAGCTCCATATTGCGCCTCCAGGATCGGGCGCAG
GAGGCTTTGTTCGATTTGCGCGCCATGGAAAAGGAGTACCAGACCTCCAA
GAacaggatggaaggaaaagaggaggccTTTCGTCGTGCCTTACGGGAGC
ATTTGGGCCGCTTCCAGGTCCAGGAGGAAGCCCGCGCTCTCTTCGTCAAG
CAGCAATTGCAGCGGCCACCCTGA back to top
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