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Properties
| Property Name | Value |
|---|
| Product | peptidase s15 |
| Orig transcript id | gnl|cribi|Naga_100822g2.2703.mrna |
| Orig protein id | gnl|cribi|Naga_100822g2.2703 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:100172..102271 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1777 ID=rna1777|Name=rna1777|organism=Nannochloropsis gaditana|type=mRNA|length=1486bp
GGAGGAGAGGCGGTGCGGTTGCGGGTGGATTTGCACAAGGCAAAGCTTTC
CCGGGGTCCCACGCGCTACACGGCCATGACGCACATTTTCCTGCCGATGG
ACTACGACTTCACGGACTCCCACTGTCTCCGGCAGCAGCTCCTCTTCACC
TCTTCCCCTCTGTCTGCCGACCTGGAGGTCACCGGCTTTCCGCTTGCTAC
CCTCCTCGTCTCCTCCTCCCAGCCCGACGCCGCCCTCTTCCTCTTCCTGC
TTTGTGTGGATACGCAAGGAAAGGCCCATTACATCACGGAAGCCTGCTTG
CGCGTCAGCAGCCGTGCCACCCTCCCTCCCTCCACCCCTCCCTCCCCCTC
GTCCTCCCTCGGGACCTCGGTGTTGTGCTACCCGGGCCTGCCCCGCCACT
CCTTCCGTCGCGCGGACGTGAAATTCCTGACGCCCGGGGTCCCTGTCCGA
GTCGAGATAGTCTTTCAACCCAGCAGTTACCGCATTCTTCGAGGACAGTC
GATCCGCCTGGCCGTGGCTGGCAGCAACCCTCGCGATTTCTTGCCGATCC
CACTCGGAGAAGGGGTGGATTTCTACGATTTGACCCTCCATGTGGATGCA
GGCAAGGATGAGAGGGCAGGAATTGAAAGGAGAATGGAAGGATCGAATGC
GGGACTGGGTGGTTGCCGCCTTGTGTTACCTGTGGTGTAAAGAGAGCGAA
GACAAAACCAGGGGGGTTGGAAACGGGGCAGACTGGTCTCAAGTACCAGG
GTCAAGAGGAAGTGCGCGGAGTGAAGATGACATAGCCATATTGACTGACC
ACGAAGAGAGAAGGACAAAGGCAAGGAACCTCATGTAAATGCAGGACGGA
TTAATTTGGGTCTCTTTTGTGGCTGTCCTTGGTAATGTTCTTAAACTCTG
TGCGGTGCTTTCCACCCATTGCTAGATGGAGTTATCCTACCATCTTACAT
GCTGCATTCATTCGCACAGGCTATGCTCGTACATGGTTGTTTTTCCGCCG
GGGAAGGCTCCTTATCTTCTAGATTTCTCCTTCATTAACGATAGACTGTG
GCTCTTTTTTTTCTTCAAGATTATATCTCATGTTCTGCAATTGTTAGATG
CACTACATTATATGTAGTGTTTTCAACTCTCTACCAGGCTATTTACAGCA
AGGAAAGAAACGGCATAGGCAGCGATTTCACGCCTTCCAACACAGAGAAA
GACACCTTTTAACAAAGCGGAAAATATACCTAGGCTAGAGGCTCACTCAC
AAAAACGAGAATCTACTTCAAAATGTAATCTTTCGTCGTTTTTATCCTGT
TCATGGTTTCAGACGCATTAAACCGAGATTTTGGATGGAGTCTCCTTTAG
GGTTTCGCGCCCCCCACGGGGCCGCCAGTCGGAGAAAAATCGGGAAAAAA
AGTTACTTTCCAGACACATGCCTTCAGACCACTCCAATAATCTGGCCACA
CTGCTAAACGTTGCGAGGGTCCTGCATGACAATGCG back to topprotein sequence of rna1777 >rna1777-protein ID=rna1777-protein|Name=rna1777|organism=Nannochloropsis gaditana|type=polypeptide|length=197bp
MDYDFTDSHCLRQQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLF
LLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPR
HSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLP
IPLGEGVDFYDLTLHVDAGKDERAGIERRMEGSNAGLGGCRLVLPVV back to topmRNA from alignment at CM002458.1:100172..102271+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1777 ID=rna1777|Name=rna1777|organism=Nannochloropsis gaditana|type=mRNA|length=2100bp|location=Sequence derived from alignment at CM002458.1:100172..102271+ (Nannochloropsis gaditana)
CGGCTTGTGCTTCTTTTGTGCACCTCGTATTTTGGGAGGACACGAGAAGA
TTTGAAGGCAGGGTTATCCGTCATATCCTATATTTAAgcgtgccctccct
cccctccatcctccacctccccatcctcacggtctctctccttcccccct
ccctcctttcctccctcccttcctccgtccccccctttccgtccctgGTA
GATGGACTACGACTTCACGGACTCCCACTGTCTCCggcagcagctcctct
tcacctcttcccctctgtCTGCCGACCTGGAGGTAAGCAAAGCGTACCCT
TTCCCtacatttcctcctccttcatccatcccctccttctcgccctcccc
ccctccctcccttttccttccaggTCACCGGCTTTCCGCTTGctaccctc
ctcgtctcctcctcccagcccgacgccgccctcttcctcttcctgctttG
TGTGGATACGCAAGGAAAGGCCCATTACATCACGGAAGCCTGCTTGCGCG
TCAGCAGCcgtgccaccctccctccctccacccctccctccccctcgtcc
tccctcgggaCCTCGGTGTTGTGCTACCCGGGCCTGCCCCGCCACTCCTT
CCGTCGCGCGGACGTGAAATTCCTGACGCCCGGGGTCCCTGTCCGAGTCG
AGATAGTCTTTCAACCCAGcaggtggggaagaggatgggaaaggaggagg
ggtacggggggaggaagggaggaaaggaggaagggaaaggggggaggggg
ggaggaaagggcgaaAGGCCAGAGGAgcggtaggagggaaggaaaagggg
caTCCACatagggaaaggaggaagatagAACTGTCGCGTGTCGCTTAGAT
AGGGGGCCTCGGATCGGTCCAcaaagggaggtggaggaacaggacgggag
gagggagggagggagggagggagggaggtcaaggGAAGCAAGGGGGTGCC
TTGTCCTCGTGCTGCCGgcgtcccgcccgcccgcgaTGCCGTCATCCAGG
CTCTCTGACAATCATTTCCCTGCGCCCTGGTTACGGAGCAGCATGTGGAC
CTCATTACTCACGCACAATGTCTGCCCTACTTTTCCACAGTTACCGCATT
CTTCGAGGACAGTCGATCCGCCTGGCCGTGGCTGGCAGCAACCCTCGCGA
TTTCTTGCCGATCCCACTCGGAGAAGGGGTGGATTTCTACGATTTGACCC
TCCATGTGGATGCAGGCAAGGATGAGAGGGCAGGAATTGAAAGGAGAATG
GAAGGATCGAATGCGGGACTGGGTGGTTGCCGCCTTGTGTTACCTGTGGT
GTAAAGAGAGCGAAGACAAAACCAGGGGGGTTGGAAACGGGGCAGACTGG
TCTCAAGTACCAGGGTCAAGAGGAAGTGCGCGGAGTGAAGATGACATAGC
CATATTGACTGACCACgaagagagaaggacaaaGGCAAGGAACCTCATGT
AAATGCAGGACGGATTAATTTGGGTCTCTTTTGTGGCTGTCCTTGGTAAT
GTTCTTAAACTCTGTGCGGTGCTTTCCACCCATTGCTAGATGGAGTTATC
CTACCATCTTACATGCTGCATTCATTCGCACAGGCTATGCTCGTACATGG
TTGTTTTTCCGCCGGGGAAGGCTCCTTATCTTCTAGATTTCTCCTTCATT
AACGATAGACTGtggctcttttttttcttcaagaTTATATCTCATGTTCT
GCAATTGTTAGATGCACTACATTATATGTAGTGTTTTCAACTCTCTACCA
GGCTATTTACAGCAAGGAAAGAAACGGCATAGGCAGCGATTTCACGCCTT
CCAACACAGAGAAAGACACCTTTTAACAAAGCGGAAAATATACCTAGGCT
AGAGGCTCACTCACAAAAACGAGAATCTACTTCAAAATGTAATCTTTCGT
CGTTTTTATCCTGTTCATGGTTTCAGACGCATTAAACCGAGATTTTGGAT
GGAGTCTCCTTTAGGGTTTCGCGCCCCCCACGGGGCCGCCAGTCGGAGAA
AAATCGGGAAAAAAAGTTACTTTCCAGACACATGCCTTCAGACCACTCCA
ATAATCTGGCCACACTGCTAAACGTTGCGAGGGTCCTGCATGACAATGCG
back to topCoding sequence (CDS) from alignment at CM002458.1:100172..102271+ >rna1777 ID=rna1777|Name=rna1777|organism=Nannochloropsis gaditana|type=CDS|length=1782bp|location=Sequence derived from alignment at CM002458.1:100172..102271+ (Nannochloropsis gaditana)
ATGGACTACGACTTCACGGACTCCCACTGTCTCCggcagcagctcctctt
cacctcttcccctctgtCTGCCGACCTGGAGgTCACCGGCTTTCCGCTTG
ctaccctcctcgtctcctcctcccagcccgacgccgccctcttcctcttc
ctgctttGTGTGGATACGCAAGGAAAGGCCCATTACATCACGGAAGCCTG
CTTGCGCGTCAGCAGCcgtgccaccctccctccctccacccctccctccc
cctcgtcctccctcgggaCCTCGGTGTTGTGCTACCCGGGCCTGCCCCGC
CACTCCTTCCGTCGCGCGGACGTGAAATTCCTGACGCCCGGGGTCCCTGT
CCGAGTCGAGATAGTCTTTCAACCCAGcagTTACCGCATTCTTCGAGGAC
AGTCGATCCGCCTGGCCGTGGCTGGCAGCAACCCTCGCGATTTCTTGCCG
ATCCCACTCGGAGAAGGGGTGGATTTCTACGATTTGACCCTCCATGTGGA
TGCAGGCAAGGATGAGAGGGCAGGAATTGAAAGGAGAATGGAAGGATCGA
ATGCGGGACTGGGTGGTTGCCGCCTTGTGTTACCTGTGGTGTAAATGGAC
TACGACTTCACGGACTCCCACTGTCTCCggcagcagctcctcttcacctc
ttcccctctgtCTGCCGACCTGGAGgTCACCGGCTTTCCGCTTGctaccc
tcctcgtctcctcctcccagcccgacgccgccctcttcctcttcctgctt
tGTGTGGATACGCAAGGAAAGGCCCATTACATCACGGAAGCCTGCTTGCG
CGTCAGCAGCcgtgccaccctccctccctccacccctccctccccctcgt
cctccctcgggaCCTCGGTGTTGTGCTACCCGGGCCTGCCCCGCCACTCC
TTCCGTCGCGCGGACGTGAAATTCCTGACGCCCGGGGTCCCTGTCCGAGT
CGAGATAGTCTTTCAACCCAGcagTTACCGCATTCTTCGAGGACAGTCGA
TCCGCCTGGCCGTGGCTGGCAGCAACCCTCGCGATTTCTTGCCGATCCCA
CTCGGAGAAGGGGTGGATTTCTACGATTTGACCCTCCATGTGGATGCAGG
CAAGGATGAGAGGGCAGGAATTGAAAGGAGAATGGAAGGATCGAATGCGG
GACTGGGTGGTTGCCGCCTTGTGTTACCTGTGGTGTAAATGGACTACGAC
TTCACGGACTCCCACTGTCTCCggcagcagctcctcttcacctcttcccc
tctgtCTGCCGACCTGGAGgTCACCGGCTTTCCGCTTGctaccctcctcg
tctcctcctcccagcccgacgccgccctcttcctcttcctgctttGTGTG
GATACGCAAGGAAAGGCCCATTACATCACGGAAGCCTGCTTGCGCGTCAG
CAGCcgtgccaccctccctccctccacccctccctccccctcgtcctccc
tcgggaCCTCGGTGTTGTGCTACCCGGGCCTGCCCCGCCACTCCTTCCGT
CGCGCGGACGTGAAATTCCTGACGCCCGGGGTCCCTGTCCGAGTCGAGAT
AGTCTTTCAACCCAGcagTTACCGCATTCTTCGAGGACAGTCGATCCGCC
TGGCCGTGGCTGGCAGCAACCCTCGCGATTTCTTGCCGATCCCACTCGGA
GAAGGGGTGGATTTCTACGATTTGACCCTCCATGTGGATGCAGGCAAGGA
TGAGAGGGCAGGAATTGAAAGGAGAATGGAAGGATCGAATGCGGGACTGG
GTGGTTGCCGCCTTGTGTTACCTGTGGTGTAA back to top
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