EWM28899.1, cds1773 (CDS) Nannochloropsis gaditana

Overview
NameEWM28899.1
Unique Namecds1773
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:100373..100453 +
Alignment locationCM002458.1:100545..100843 +
Alignment locationCM002458.1:101262..101475 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28899.1
Productpeptidase s15
Orig transcript idgnl|cribi|Naga_100822g2.2703.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:100373..100453 +
CM002458.1supercontigCM002458.1:100545..100843 +
CM002458.1supercontigCM002458.1:101262..101475 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0008239dipeptidyl-peptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR013736Xaa-Pro_dipept_C
IPR008979Galactose-bd-like
Homology
BLAST of EWM28899.1 vs. NCBI_GenBank
Match: gi|585111340|gb|EWM28899.1| (peptidase s15 [Nannochloropsis gaditana])

HSP 1 Score: 394.815 bits (1013), Expect = 5.375e-139
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
Query:    1 MDYDFTDSHCLRQQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIPLGEGVDFYDLTLHVDAGKDERAGIERRMEGSNAGLGGCRLVLPVV 197
            MDYDFTDSHCLRQQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIPLGEGVDFYDLTLHVDAGKDERAGIERRMEGSNAGLGGCRLVLPVV
Sbjct:    1 MDYDFTDSHCLRQQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIPLGEGVDFYDLTLHVDAGKDERAGIERRMEGSNAGLGGCRLVLPVV 197          
BLAST of EWM28899.1 vs. NCBI_GenBank
Match: gi|585111339|gb|EWM28898.1| (peptidase s15 [Nannochloropsis gaditana])

HSP 1 Score: 394.815 bits (1013), Expect = 6.536e-139
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
Query:    1 MDYDFTDSHCLRQQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIPLGEGVDFYDLTLHVDAGKDERAGIERRMEGSNAGLGGCRLVLPVV 197
            MDYDFTDSHCLRQQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIPLGEGVDFYDLTLHVDAGKDERAGIERRMEGSNAGLGGCRLVLPVV
Sbjct:    8 MDYDFTDSHCLRQQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIPLGEGVDFYDLTLHVDAGKDERAGIERRMEGSNAGLGGCRLVLPVV 204          
BLAST of EWM28899.1 vs. NCBI_GenBank
Match: gi|950125149|ref|WP_057181216.1| (MULTISPECIES: hypothetical protein [Colwellia] >gi|1205369433|dbj|GAW95165.1| acylase [Colwellia marinimaniae])

HSP 1 Score: 99.7525 bits (247), Expect = 5.718e-21
Identity = 49/141 (34.75%), Postives = 81/141 (57.45%), Query Frame = 0
Query:   12 RQQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIP 152
            ++ L++TS+PL+ D+++TG+P+ +L +SS+  D A   +L  VD QG + Y+ E  LR   R        P+P   L         +P HSF RAD + LTP +   ++    P+S +I +G  IR+A+AG++  +F+ IP
Sbjct:  477 KKLLIYTSAPLTEDMQITGWPIVSLTISSTHSDGAFIAYLEDVDEQGNSIYVNEGGLRAIHR-----KIKPNPVKGLAH-------IPYHSFERADAELLTPNMITEIKFEMIPTSVKIAKGHRIRIAIAGADKDNFVRIP 605          
BLAST of EWM28899.1 vs. NCBI_GenBank
Match: gi|953555016|ref|WP_058027193.1| (hypothetical protein [Colwellia sp. MT41] >gi|953005352|gb|ALO35065.1| hypothetical protein CMT41_10310 [Colwellia sp. MT41])

HSP 1 Score: 99.7525 bits (247), Expect = 5.778e-21
Identity = 49/141 (34.75%), Postives = 81/141 (57.45%), Query Frame = 0
Query:   12 RQQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIP 152
            ++ L++TS+PL+ D+++TG+P+ +L +SS+  D A   +L  VD QG + Y+ E  LR   R        P+P   L         +P HSF RAD + LTP +   ++    P+S +I +G  IR+A+AG++  +F+ IP
Sbjct:  477 KKLLIYTSAPLTEDMQITGWPIVSLTISSTHSDGAFIAYLEDVDEQGNSIYVNEGGLRAIHR-----KIKPNPVKGLAH-------IPYHSFERADAELLTPNMITEIKFEMIPTSVKIAKGHRIRIAIAGADKDNFVRIP 605          
BLAST of EWM28899.1 vs. NCBI_GenBank
Match: gi|298706994|emb|CBJ29802.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 93.9745 bits (232), Expect = 6.850e-19
Identity = 52/142 (36.62%), Postives = 79/142 (55.63%), Query Frame = 0
Query:   13 QQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAAL--FLFLLCVDTQ-GKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPI 151
              L FTS+PL  D+EVTG+P+ +L VS++   A L  F +L  V  + G + Y+TE C R   R     + P          V   PG+P HS+ R+D + L  G PV ++    P+S++ L+GQ +RL++ G++ R F PI
Sbjct:  905 NHLRFTSAPLRQDIEVTGYPVVSLWVSAADDIAKLDVFAYLQAVRPRTGLSIYVTEGCFRAEHRKEALRTEP--------VDVRALPGVPIHSYLRSDAQPLRKGQPVEIKFKLMPTSFKFLKGQRVRLSIGGADARHFHPI 1038          
BLAST of EWM28899.1 vs. NCBI_GenBank
Match: gi|1210281220|ref|WP_088472937.1| (hypothetical protein [Sphingopyxis witflariensis] >gi|1209520078|gb|OWQ96736.1| hypothetical protein CDQ91_10475 [Sphingopyxis witflariensis])

HSP 1 Score: 91.2781 bits (225), Expect = 7.706e-19
Identity = 55/138 (39.86%), Postives = 77/138 (55.80%), Query Frame = 0
Query:   15 LLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIP 152
            LL+TS PL  D+E+TG+P  TL +SSS  D A+ ++L  V   G+   ITE  LR+SSR +      P P    GTS       P HSF RAD + + PGV   V +   P+S  + +G S+R+A+AG +   F  +P
Sbjct:  124 LLYTSPPLKKDMEITGYPKITLQMSSSHKDGAVIVYLESVAPDGRVTMITEGALRLSSRKS------PGPRPG-GTSF-----GPEHSFLRADARDMVPGVTDMVSLALLPTSVMVPKGHSLRVAIAGHDKDSFYRLP 249          
BLAST of EWM28899.1 vs. NCBI_GenBank
Match: gi|1199210543|gb|OUR78174.1| (hypothetical protein A9Q75_14015 [Colwellia psychrerythraea])

HSP 1 Score: 90.5077 bits (223), Expect = 1.065e-17
Identity = 47/141 (33.33%), Postives = 78/141 (55.32%), Query Frame = 0
Query:   12 RQQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIP 152
            ++ L +TS PL+ D+++TG+P+ +L VSS+  D A   +L  +D QG + Y+ E  LR   R         +P + L         LP HSF++AD + L P     ++    P+S +I +G  IR+A+AG++  +F+ IP
Sbjct:  477 KKLLTYTSEPLTKDMQITGWPIVSLTVSSTHSDGAFIAYLEDIDEQGNSIYVNEGGLRAIHR-----KVKANPVTGL-------EHLPYHSFKKADAQPLVPNKVSEIKFEMIPTSVKIAKGHRIRIAIAGADKDNFVRIP 605          
BLAST of EWM28899.1 vs. NCBI_GenBank
Match: gi|563444761|ref|WP_023671605.1| (hypothetical protein [Mesorhizobium sp. LSJC285A00] >gi|562952045|gb|ESW78017.1| hypothetical protein X773_21785 [Mesorhizobium sp. LSJC285A00])

HSP 1 Score: 90.1225 bits (222), Expect = 1.257e-17
Identity = 49/143 (34.27%), Postives = 79/143 (55.24%), Query Frame = 0
Query:   13 QQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIPLGE 155
            + L++TSSP  AD+E+TG P A + +S++  D A+F++L  V+  GK HYITE  LR   R     S  P    ++G         P  ++R  D+  + P   + + +   P+S+ +  G  IRLA+AG++ R F  +P+GE
Sbjct:  463 RMLVYTSSPAVADVEITGHPEAVVWLSTTASDGAIFVYLEDVEPSGKRHYITEGVLRFLHRKV---SESPDHDRTIG---------PYRTYRHQDITPVVPNSEMELRVGLLPTSWLLKAGHRIRLAIAGADSRHFSRVPVGE 593          
BLAST of EWM28899.1 vs. NCBI_GenBank
Match: gi|499355408|ref|WP_011044105.1| (acylase [Colwellia psychrerythraea] >gi|71145010|gb|AAZ25483.1| putative acylase [Colwellia psychrerythraea 34H])

HSP 1 Score: 89.7373 bits (221), Expect = 2.210e-17
Identity = 46/141 (32.62%), Postives = 79/141 (56.03%), Query Frame = 0
Query:   12 RQQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIP 152
            ++ L +TS PL+ D+++TG+P+ +L VSS+  D A   +L  +D QG + Y+ E  LR   R  +      +P ++L         LP HSF++ D + L P     ++    P+S +I +G  IR+A+AG++  +F+ IP
Sbjct:  477 KKLLTYTSEPLTEDMQITGWPVISLTVSSTHSDGAFIAYLEDIDEQGNSIYVNEGGLRAIHRKVI-----TNPVAALAH-------LPYHSFKKEDAQPLVPNKVSEIKFEMIPTSVKIAKGHRIRIAIAGADKDNFVRIP 605          
BLAST of EWM28899.1 vs. NCBI_GenBank
Match: gi|1095252385|emb|SEP22735.1| (hypothetical protein SAMN02990966_04500 [Rhodospirillales bacterium URHD0017])

HSP 1 Score: 88.5817 bits (218), Expect = 4.969e-17
Identity = 52/151 (34.44%), Postives = 80/151 (52.98%), Query Frame = 0
Query:    4 DFTDSHCLRQQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIPLG 154
            D+T+    R  L FT+ PL+A LE+ G P+ +L ++SS+PDAA+F++L  V+  G A Y+TE  LR   RA       P+P +   T        P  +F R D + +  G P  +     P+++R   G  IRL++AG +   F+  P G
Sbjct:  447 DWTERE--RGLLSFTTEPLAAPLEIAGHPVVSLWIASSEPDAAVFVYLSEVEADGTARYVTEGLLRAIHRAEA-----PAPKNYRTT-------WPWRTFARKDARPMPIGEPQLLRFALLPTAWRFAAGSRIRLSIAGGDADHFVQTPHG 583          
The following BLAST results are available for this feature:
BLAST of EWM28899.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111340|gb|EWM28899.1|5.375e-139100.00peptidase s15 [Nannochloropsis gaditana][more]
gi|585111339|gb|EWM28898.1|6.536e-139100.00peptidase s15 [Nannochloropsis gaditana][more]
gi|950125149|ref|WP_057181216.1|5.718e-2134.75MULTISPECIES: hypothetical protein [Colwellia] >gi... [more]
gi|953555016|ref|WP_058027193.1|5.778e-2134.75hypothetical protein [Colwellia sp. MT41] >gi|9530... [more]
gi|298706994|emb|CBJ29802.1|6.850e-1936.62conserved unknown protein [Ectocarpus siliculosus][more]
gi|1210281220|ref|WP_088472937.1|7.706e-1939.86hypothetical protein [Sphingopyxis witflariensis] ... [more]
gi|1199210543|gb|OUR78174.1|1.065e-1733.33hypothetical protein A9Q75_14015 [Colwellia psychr... [more]
gi|563444761|ref|WP_023671605.1|1.257e-1734.27hypothetical protein [Mesorhizobium sp. LSJC285A00... [more]
gi|499355408|ref|WP_011044105.1|2.210e-1732.62acylase [Colwellia psychrerythraea] >gi|71145010|g... [more]
gi|1095252385|emb|SEP22735.1|4.969e-1734.44hypothetical protein SAMN02990966_04500 [Rhodospir... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1777rna1777Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications