EWM28899.1, cds1773 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28899.1 vs. NCBI_GenBank
Match: gi|585111340|gb|EWM28899.1| (peptidase s15 [Nannochloropsis gaditana]) HSP 1 Score: 394.815 bits (1013), Expect = 5.375e-139 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0 Query: 1 MDYDFTDSHCLRQQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIPLGEGVDFYDLTLHVDAGKDERAGIERRMEGSNAGLGGCRLVLPVV 197 MDYDFTDSHCLRQQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIPLGEGVDFYDLTLHVDAGKDERAGIERRMEGSNAGLGGCRLVLPVV Sbjct: 1 MDYDFTDSHCLRQQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIPLGEGVDFYDLTLHVDAGKDERAGIERRMEGSNAGLGGCRLVLPVV 197
BLAST of EWM28899.1 vs. NCBI_GenBank
Match: gi|585111339|gb|EWM28898.1| (peptidase s15 [Nannochloropsis gaditana]) HSP 1 Score: 394.815 bits (1013), Expect = 6.536e-139 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0 Query: 1 MDYDFTDSHCLRQQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIPLGEGVDFYDLTLHVDAGKDERAGIERRMEGSNAGLGGCRLVLPVV 197 MDYDFTDSHCLRQQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIPLGEGVDFYDLTLHVDAGKDERAGIERRMEGSNAGLGGCRLVLPVV Sbjct: 8 MDYDFTDSHCLRQQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIPLGEGVDFYDLTLHVDAGKDERAGIERRMEGSNAGLGGCRLVLPVV 204
BLAST of EWM28899.1 vs. NCBI_GenBank
Match: gi|950125149|ref|WP_057181216.1| (MULTISPECIES: hypothetical protein [Colwellia] >gi|1205369433|dbj|GAW95165.1| acylase [Colwellia marinimaniae]) HSP 1 Score: 99.7525 bits (247), Expect = 5.718e-21 Identity = 49/141 (34.75%), Postives = 81/141 (57.45%), Query Frame = 0 Query: 12 RQQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIP 152 ++ L++TS+PL+ D+++TG+P+ +L +SS+ D A +L VD QG + Y+ E LR R P+P L +P HSF RAD + LTP + ++ P+S +I +G IR+A+AG++ +F+ IP Sbjct: 477 KKLLIYTSAPLTEDMQITGWPIVSLTISSTHSDGAFIAYLEDVDEQGNSIYVNEGGLRAIHR-----KIKPNPVKGLAH-------IPYHSFERADAELLTPNMITEIKFEMIPTSVKIAKGHRIRIAIAGADKDNFVRIP 605
BLAST of EWM28899.1 vs. NCBI_GenBank
Match: gi|953555016|ref|WP_058027193.1| (hypothetical protein [Colwellia sp. MT41] >gi|953005352|gb|ALO35065.1| hypothetical protein CMT41_10310 [Colwellia sp. MT41]) HSP 1 Score: 99.7525 bits (247), Expect = 5.778e-21 Identity = 49/141 (34.75%), Postives = 81/141 (57.45%), Query Frame = 0 Query: 12 RQQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIP 152 ++ L++TS+PL+ D+++TG+P+ +L +SS+ D A +L VD QG + Y+ E LR R P+P L +P HSF RAD + LTP + ++ P+S +I +G IR+A+AG++ +F+ IP Sbjct: 477 KKLLIYTSAPLTEDMQITGWPIVSLTISSTHSDGAFIAYLEDVDEQGNSIYVNEGGLRAIHR-----KIKPNPVKGLAH-------IPYHSFERADAELLTPNMITEIKFEMIPTSVKIAKGHRIRIAIAGADKDNFVRIP 605
BLAST of EWM28899.1 vs. NCBI_GenBank
Match: gi|298706994|emb|CBJ29802.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 93.9745 bits (232), Expect = 6.850e-19 Identity = 52/142 (36.62%), Postives = 79/142 (55.63%), Query Frame = 0 Query: 13 QQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAAL--FLFLLCVDTQ-GKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPI 151 L FTS+PL D+EVTG+P+ +L VS++ A L F +L V + G + Y+TE C R R + P V PG+P HS+ R+D + L G PV ++ P+S++ L+GQ +RL++ G++ R F PI Sbjct: 905 NHLRFTSAPLRQDIEVTGYPVVSLWVSAADDIAKLDVFAYLQAVRPRTGLSIYVTEGCFRAEHRKEALRTEP--------VDVRALPGVPIHSYLRSDAQPLRKGQPVEIKFKLMPTSFKFLKGQRVRLSIGGADARHFHPI 1038
BLAST of EWM28899.1 vs. NCBI_GenBank
Match: gi|1210281220|ref|WP_088472937.1| (hypothetical protein [Sphingopyxis witflariensis] >gi|1209520078|gb|OWQ96736.1| hypothetical protein CDQ91_10475 [Sphingopyxis witflariensis]) HSP 1 Score: 91.2781 bits (225), Expect = 7.706e-19 Identity = 55/138 (39.86%), Postives = 77/138 (55.80%), Query Frame = 0 Query: 15 LLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIP 152 LL+TS PL D+E+TG+P TL +SSS D A+ ++L V G+ ITE LR+SSR + P P GTS P HSF RAD + + PGV V + P+S + +G S+R+A+AG + F +P Sbjct: 124 LLYTSPPLKKDMEITGYPKITLQMSSSHKDGAVIVYLESVAPDGRVTMITEGALRLSSRKS------PGPRPG-GTSF-----GPEHSFLRADARDMVPGVTDMVSLALLPTSVMVPKGHSLRVAIAGHDKDSFYRLP 249
BLAST of EWM28899.1 vs. NCBI_GenBank
Match: gi|1199210543|gb|OUR78174.1| (hypothetical protein A9Q75_14015 [Colwellia psychrerythraea]) HSP 1 Score: 90.5077 bits (223), Expect = 1.065e-17 Identity = 47/141 (33.33%), Postives = 78/141 (55.32%), Query Frame = 0 Query: 12 RQQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIP 152 ++ L +TS PL+ D+++TG+P+ +L VSS+ D A +L +D QG + Y+ E LR R +P + L LP HSF++AD + L P ++ P+S +I +G IR+A+AG++ +F+ IP Sbjct: 477 KKLLTYTSEPLTKDMQITGWPIVSLTVSSTHSDGAFIAYLEDIDEQGNSIYVNEGGLRAIHR-----KVKANPVTGL-------EHLPYHSFKKADAQPLVPNKVSEIKFEMIPTSVKIAKGHRIRIAIAGADKDNFVRIP 605
BLAST of EWM28899.1 vs. NCBI_GenBank
Match: gi|563444761|ref|WP_023671605.1| (hypothetical protein [Mesorhizobium sp. LSJC285A00] >gi|562952045|gb|ESW78017.1| hypothetical protein X773_21785 [Mesorhizobium sp. LSJC285A00]) HSP 1 Score: 90.1225 bits (222), Expect = 1.257e-17 Identity = 49/143 (34.27%), Postives = 79/143 (55.24%), Query Frame = 0 Query: 13 QQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIPLGE 155 + L++TSSP AD+E+TG P A + +S++ D A+F++L V+ GK HYITE LR R S P ++G P ++R D+ + P + + + P+S+ + G IRLA+AG++ R F +P+GE Sbjct: 463 RMLVYTSSPAVADVEITGHPEAVVWLSTTASDGAIFVYLEDVEPSGKRHYITEGVLRFLHRKV---SESPDHDRTIG---------PYRTYRHQDITPVVPNSEMELRVGLLPTSWLLKAGHRIRLAIAGADSRHFSRVPVGE 593
BLAST of EWM28899.1 vs. NCBI_GenBank
Match: gi|499355408|ref|WP_011044105.1| (acylase [Colwellia psychrerythraea] >gi|71145010|gb|AAZ25483.1| putative acylase [Colwellia psychrerythraea 34H]) HSP 1 Score: 89.7373 bits (221), Expect = 2.210e-17 Identity = 46/141 (32.62%), Postives = 79/141 (56.03%), Query Frame = 0 Query: 12 RQQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIP 152 ++ L +TS PL+ D+++TG+P+ +L VSS+ D A +L +D QG + Y+ E LR R + +P ++L LP HSF++ D + L P ++ P+S +I +G IR+A+AG++ +F+ IP Sbjct: 477 KKLLTYTSEPLTEDMQITGWPVISLTVSSTHSDGAFIAYLEDIDEQGNSIYVNEGGLRAIHRKVI-----TNPVAALAH-------LPYHSFKKEDAQPLVPNKVSEIKFEMIPTSVKIAKGHRIRIAIAGADKDNFVRIP 605
BLAST of EWM28899.1 vs. NCBI_GenBank
Match: gi|1095252385|emb|SEP22735.1| (hypothetical protein SAMN02990966_04500 [Rhodospirillales bacterium URHD0017]) HSP 1 Score: 88.5817 bits (218), Expect = 4.969e-17 Identity = 52/151 (34.44%), Postives = 80/151 (52.98%), Query Frame = 0 Query: 4 DFTDSHCLRQQLLFTSSPLSADLEVTGFPLATLLVSSSQPDAALFLFLLCVDTQGKAHYITEACLRVSSRATLPPSTPPSPSSSLGTSVLCYPGLPRHSFRRADVKFLTPGVPVRVEIVFQPSSYRILRGQSIRLAVAGSNPRDFLPIPLG 154 D+T+ R L FT+ PL+A LE+ G P+ +L ++SS+PDAA+F++L V+ G A Y+TE LR RA P+P + T P +F R D + + G P + P+++R G IRL++AG + F+ P G Sbjct: 447 DWTERE--RGLLSFTTEPLAAPLEIAGHPVVSLWIASSEPDAAVFVYLSEVEADGTARYVTEGLLRAIHRAEA-----PAPKNYRTT-------WPWRTFARKDARPMPIGEPQLLRFALLPTAWRFAAGSRIRLSIAGGDADHFVQTPHG 583 The following BLAST results are available for this feature:
BLAST of EWM28899.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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