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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101190g4.5762.mrna |
| Orig protein id | gnl|cribi|Naga_101190g4.5762 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:82820..84584 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1772 ID=rna1772|Name=rna1772|organism=Nannochloropsis gaditana|type=mRNA|length=1286bp
TGCACTTGCATACTCTCATGCATGCTGTACCTAGTGATGACGATGCCTAG
ACGCCAACGTCTCCATCAGAAGAGAATTCGACGAGAGGGGTTGCTTCGCC
GCCGGGGCGAGACAGACTTCTGAACACAGGGTGTGACGTGTCACGAATAT
ATACAAAGCCGCACAGGCCGGACAAGCCGCGTGACTTGATCAACATATGG
TCATTCCGCGAAATCCCAGCGTAGTGACCACACGCCCACGGGGCGGTGGT
TTTGAAAAACGAAGAGAGAGAGAGATGGAGACTGGAAATTGAAGACTTGA
GGCGCAAGCCTGGAGATTCTTCCTTCTTCAACAAGCGGGAAAAGAGTGAA
GTAGACCGAAGAAAGCGGGCGCGTGCACGCCGCGTAAGGGTGCCTTCTTA
CGCCTTGACGTGGGTGCTTGGACGCGGAGGGAGTGGCATGTGGCCTGCGT
GGTGTTTAGGGCCGAGTGTTGCGGAGTTAGGGAAACTGATTCAGTGAACG
TATATCTTCGCATTCAGTTTCCCCTCCCGGTTGCAGTACAACCAGGACCA
ATGCAAGTGCCACCGACGGTCTTCTGGAAGCGGTTGCTCCTCTCTCTGTG
TTTAGGGATGCCTGTCACTGGCTTTGAAGCGTGGATGGCAATGTTGTGCA
TGCTTTTGGGCGCCTTTGTCACGGGGTCGGAGGGAAATTCGGTGGAGAGA
GACCAGCTAAGCCAGCACCCTCATGAAGCAACACGATGGAGCGAGGAAAC
CGGCACCCCGATAGAAAATCTACCCCTACAATGCGTGCCGCATCAGCATC
GGACTCAAATGTGAAGCCTATACTACCCATGGCACGTTTCTCCGCCCCCT
TTTGCCTCCGTGTGTTTGGCGCAGGCGTTGTGCTTGCCACGGCTTTTTCG
CTCCAAGCGCCCTTATCCAGCCGCAGCACTGTAGCCCCGGCAGGGAAGGC
ATTGGCCTTTGCTCCTCCCAAGGGCACGGGGGTACCTGCGCCGGCGGGTC
TTGTGAAGAAAGAGAATGACTTCTCCTTCCGCCTCCAATCTGTGGCCGGG
GGGGCGGCGGCCCCCGCGCCGAAGAAGAACGCCTTGCTGGAGAAGGTCTG
GAACGAAAACACCAAGTTGGTGACCTACATTACCGTCTGGTACCTGGGCA
ACATCTGGTACAACATCTACAACAAGAAGGCCCTGAACCTGCTGGGCAAG
AATGGGGGAGGGGCATTGGGCCCTGGCGGCGGGGCAGCTCTTGGTAGGGG
CTCTCTTTGTGATTCCCCAGTGGGTCCTAGGCGTGC back to topprotein sequence of rna1772 >rna1772-protein ID=rna1772-protein|Name=rna1772|organism=Nannochloropsis gaditana|type=polypeptide|length=127bp
MRPSVPPPARLLWAFDFDGVLCHSAKELCMTGWVAARRFWPSEAHSWPDR
PDPNILSSFATVRPVVETGWESMLITRALHEGEYSTETILKDYTASLRET
LIKEYGEYPPEAYMETFRSVRQEWMNR back to topmRNA from alignment at CM002458.1:82820..84584+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1772 ID=rna1772|Name=rna1772|organism=Nannochloropsis gaditana|type=mRNA|length=1765bp|location=Sequence derived from alignment at CM002458.1:82820..84584+ (Nannochloropsis gaditana)
CCCTAAACACAGAGAGAGGAGCAACCGCTTCCAGAAGACCGTCGGTGGCA
CTTGCATTGGTCCTGGTTGTACTGCAaccgggaggggaaactGAATGCGA
AGATATACGTTCACTGAATCAGTTTCCCTAACTCCGCAACACTCGGCCCT
AAACACCACGCAGGCCACATGCcactccctccgcgtccaAGCACCCACGT
CAAGGCGTAAGAAGGCACCCTTACGCGGCGTGCACGCGCCCGCTTTCTTC
GGTCTACTTCACTCTTTTCCCGCTtgttgaagaaggaagaatCTCCAGGC
TTGCGCCTCAAGTCTTCAATTTCCAGTCtccatctctctctctcttcgtT
TTTCAAAACCACCGCCCCGTGGGCGTGTGGTCACTACGCTGGGATTTCGC
GGAATGACCATATGTTGATCAAGTCACGCGGCTTGTCCGGCCTGTGCGGC
TTTGTATATATTCGTGACACGTCACACCCTGTGTTCAGAAGTCTGTCTCG
CCCCGGCGGCGAAGCAACCCCTCTCGTCGAATTCTCTTCTGATGGAGACG
TTGGCGTCTAGGCATCGTCATCACTAGGTACAGCATGCATGAGAGTATGC
AAGTGCACCCTCTTTCCGCGCGGTGTATGTATTTGTAGCTGTCTGAACGT
AATGGATTGGAAACTTATTACAACAAGCAtccaacctcctcatccGCGAA
GCCCGTCTCCGGCCGCAGGGCAAAACATACGTTTTCAATTATTTCTCATG
CATCGTTGCCAAGTTATGGCTCGTCCATCCTTCAATAATTGAGTTTTTAC
ATGCACGTACAAGAATTGTGGTGACCATTCGGCTATTCGGTGAATTGTCT
GTCCACTTCCACTCCATTACCTTGGATCACAACACGGATATGGGCCGCTA
GGGTTCCTGTCATTACCGTACGTCTTTGTGGCATACCACGTTCATCCACA
CAGCCACAAAGATATCAACTTCCTGTGGCATAAGCCTTACGAAAAGTGTC
TTTCAAGCTCGTAATGAGATTACGGACGCTCAATTCTGTTTGTTCTTTTT
CTAGCACGAAGGCCCCGGCACCAACACCATGCggccctccgttcctccgc
CGGCTCGTCTTTTGTGGGCATTCGACTTCGACGGTGTGCTGTGTCATTCT
GCCAAAGAGTTATGCATGACAGGGTGGGTTGCGGCCCGTAGATTTTGGCC
GAGTGAGGCACATTCATGGCCAGACAGGTAAGCAGTGAAGAgaacggaga
ggggaaagagacaagATCAAGAGGGAAAGTCGAGTTCACTCAACGCCCCT
GAAACTAGACGTCTGTCCGCTTGTCTTTGTATCTCCCAGGCCCGATCCCA
ATATCTTGTCTTCGTTCGCCACCGTGCGGCCGGTGGTGGAAACCGGATGG
GAGTCCATGCTCATCACCCGCGCTTTACACGAGGGAGAGTACTCCACGGA
AACGATATTAAAAGACTACACGGTAAGGCACCATGCATTAGCTGCATTGG
ATGAAGCAGGGtggtctctttctcccgaAAGATGGCTttattcctcttcc
tctccctcttccttgcacccctccctttctcggcACCTGCCCTCAGAGAA
AGAGCCCTCTCcaaccctctctccctcgtccctcttccccctcctccagg
catcTCTCCGGGAGACACTTATAAAGGAATACGGGGAATACCCTCCGGAG
GCATACATGGAGACCTTTCGATCCGTTCGACAGGAATGGATGAAcaggta
ggaaggggggaaagg back to topCoding sequence (CDS) from alignment at CM002458.1:82820..84584+ >rna1772 ID=rna1772|Name=rna1772|organism=Nannochloropsis gaditana|type=CDS|length=1152bp|location=Sequence derived from alignment at CM002458.1:82820..84584+ (Nannochloropsis gaditana)
ATGCggccctccgttcctccgcCGGCTCGTCTTTTGTGGGCATTCGACTT
CGACGGTGTGCTGTGTCATTCTGCCAAAGAGTTATGCATGACAGGGTGGG
TTGCGGCCCGTAGATTTTGGCCGAGTGAGGCACATTCATGGCCAGACAGG
CCCGATCCCAATATCTTGTCTTCGTTCGCCACCGTGCGGCCGGTGGTGGA
AACCGGATGGGAGTCCATGCTCATCACCCGCGCTTTACACGAGGGAGAGT
ACTCCACGGAAACGATATTAAAAGACTACACGgcatcTCTCCGGGAGACA
CTTATAAAGGAATACGGGGAATACCCTCCGGAGGCATACATGGAGACCTT
TCGATCCGTTCGACAGGAATGGATGAAcaggtagATGCggccctccgttc
ctccgcCGGCTCGTCTTTTGTGGGCATTCGACTTCGACGGTGTGCTGTGT
CATTCTGCCAAAGAGTTATGCATGACAGGGTGGGTTGCGGCCCGTAGATT
TTGGCCGAGTGAGGCACATTCATGGCCAGACAGGCCCGATCCCAATATCT
TGTCTTCGTTCGCCACCGTGCGGCCGGTGGTGGAAACCGGATGGGAGTCC
ATGCTCATCACCCGCGCTTTACACGAGGGAGAGTACTCCACGGAAACGAT
ATTAAAAGACTACACGgcatcTCTCCGGGAGACACTTATAAAGGAATACG
GGGAATACCCTCCGGAGGCATACATGGAGACCTTTCGATCCGTTCGACAG
GAATGGATGAAcaggtagATGCggccctccgttcctccgcCGGCTCGTCT
TTTGTGGGCATTCGACTTCGACGGTGTGCTGTGTCATTCTGCCAAAGAGT
TATGCATGACAGGGTGGGTTGCGGCCCGTAGATTTTGGCCGAGTGAGGCA
CATTCATGGCCAGACAGGCCCGATCCCAATATCTTGTCTTCGTTCGCCAC
CGTGCGGCCGGTGGTGGAAACCGGATGGGAGTCCATGCTCATCACCCGCG
CTTTACACGAGGGAGAGTACTCCACGGAAACGATATTAAAAGACTACACG
gcatcTCTCCGGGAGACACTTATAAAGGAATACGGGGAATACCCTCCGGA
GGCATACATGGAGACCTTTCGATCCGTTCGACAGGAATGGATGAAcaggt
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