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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100869g1.5476.mrna |
| Orig protein id | gnl|cribi|Naga_100869g1.5476 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:65497..67758 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1765 ID=rna1765|Name=rna1765|organism=Nannochloropsis gaditana|type=mRNA|length=396bp
ATGGAGGAGGAAGGGGTCAGAGTGGTTTTGGGGGGGGGGGGGGATGGCGC
GAACGAGCGTGATCGACGGAAAGCATTTTGTGTGAAACGGAGACAGCCAC
GAGGGGGACGGGAAGGCCATACGCCGTATGGAGGGGAGTGCGCAACGCAG
CGCGTCAACTCACGTCGCTCAGTCGACGGAGAAGCTTGCCGCCACCTTCC
AGAAGTTTACATACGGCCGCCGACGTGCTGCGCCTGCCTTTCTCGTGGGA
GAGTAACCACTCATTTCAAGCACGAGAAGCGGTTTAGCGGCCAAGGAAAA
ACTCATCTTTGGTCAGGCACAGGTGTTAAAATTGGCCAAGAGAATGAATC
GCTCCATGTAGTTGGGAGCTACGCGAGGGTGCTGGAAAAGAAATGA back to topprotein sequence of rna1765 >rna1765-protein ID=rna1765-protein|Name=rna1765|organism=Nannochloropsis gaditana|type=polypeptide|length=334bp
MTAISSQITKACTKDTSIPLAVQAGRGMAASLLESRTSVPGPRPRSRNKY
VVLFLLATLVTSHALPTQTLTAAWDTVASFVSSPALPSTRPTSTLSQEKR
DPSTTISRPSASVPMPDMDPPVDSIEEQIALHGRPLPASTFVGSFEDGFE
GWTSLEGAQEDSIVLVSSPVRTGNQSVRIRVRPGDYIQHGNRAEITHNLE
DSPGTEGWYAWSLYIPRDYPTVADPTRQWQILCQWHDQPDLDAGQSWDAF
PPHNSSIALYLLNYPENTSIGLGVGTNLPKGTWQYGPARVEKGEWIDILF
HIGWSTGQDGFVNASVETGGLETRQTQVLTPLGG back to topmRNA from alignment at CM002458.1:65497..67758- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1765 ID=rna1765|Name=rna1765|organism=Nannochloropsis gaditana|type=mRNA|length=2262bp|location=Sequence derived from alignment at CM002458.1:65497..67758- (Nannochloropsis gaditana)
ATGACTGCAATTTCCTCACAAATCACCAAGGCATGCACAAAGTGCGATGG
ATTAAGCGTGCAAGAGGTGCTCAGGAATGGGTTTCGCACACGAAGAAATT
AAAGCCGGTCGTGACAAGCAGATGCGTGGCCTTGCCCCGAGCCTAACCAT
GAAACACTACAGGCACATTTATTTTATACGTAAAACAATATATTGATCTT
AACAATTGCTGTCCACTGCGCCCGCCTCGAGCTGTTCTCTAATAGCGACT
ACACGAAGGGCTCGGTACTGGTGTGACGTACACTACCAGATGGAACTTGA
GCTGACCAAATTTTGAACACACCGTTTTCTCACGGGCGAAAATTCTGACC
CTTTCGGATCGACGCGAACATGGCATGACACTTGTGCCCACGTCTACAGG
GACACTTCGATTCCTTTAGCGGTGCAAGCGGGGCGGGGCATGGCAGCATC
CTTACTGGAAAGTAGGACTTCCGTCCCTGGTCCTCGCCCTCGGTCACGAA
ATAAGTACGTCGTCCTCTTCCTCCTCGCCACCTTGGTCACAAGCCATGCC
CTTCCAACGCAAACGCTCACGGCAGCATGGGACACTGTTGCTAGCTTTGT
GTCTTCCCCTGCGCTCCCGTCGACTCGACCGACCTCTACTTTGTCTCAGG
AGAAACGAGATCCCTCGACTACCATATCCCGACCCTCCGCTTCAGTTCCC
ATGCCGGATATGGACCCCCCTGTCGATTCCATTGAGGTAAGCGGGCAGCA
AGTGCCCCAAACATCTATGGTTTTACCGAGCTCGCACAAAATTAGAGGGC
TGAAATGTGTCCTTTCGGGCCTTGTCCTTCTCTCCTGTTGTCAGGAACAA
ATCGCCTTACATGGTAGGCCACTGCCGGCTTCCACCTTCGTCGGATCCTT
CGAGGATGGCTTCGAGGGATGGACGAGCCTGGAAGGAGCGCAAGAAGACT
CGATAGTGGTACGTAGGAAACAGCTAGATAAGTGGGCTACGTCATGGGAA
AGAGAACTGGTCGAGGCCGGGTCCGCCTGTGATATCCTGGAGCACAGCCT
TCGCCCGAGGCCCTTCCAAATGGCTGTCGCATTCACCTTCGTCCTCGCTT
TCTTCTTTTGTTTCTTGCCCGCTTGGTTTGCACAGCTTGTGTCCTCGCCC
GTTCGCACCGGGAACCAGTCCGTGCGGATACGCGTACGTCCTGGCGACTA
CATACAGCACGGAAACCGGGCGGAAATCACGCACAACCTCGAAGACAGTC
CAGGTACTTGCGCTTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTTTCTGCGGGGAGCTTGGGGTAGACGGGGGTGGGAGGC
CGGGCTAGAGGACACGGGCAGCTTGCTCGCTTGCTTGGGAACGCCCCAAG
GCCTCTCTTTGTCTCTGCCGCCGGCGCTTTGGGTGGAAGCTCATGCTTCA
TGGCGCCGACTCGTGCTTCTCCCTCCTTCCCTCCCTCCCTCCTTCCCCTT
CGACGCCAGGGACGGAAGGGTGGTACGCGTGGTCGCTGTACATCCCCCGA
GACTACCCCACGGTGGCGGATCCGACCCGCCAGTGGCAGATCCTGTGCCA
ATGGCACGATCAGCCCGACCTGGACGCAGGTAAGGGGAGGGAGGGAGGGA
GGGAGGGAGGGAAAAGGGTGCTTCGAATGCTGAGGCAAGGTGCTTTTAGG
GATGCCTAGTACTCCTCAGTTGGTGATACAACCCCTCCCTCCCTTCCTCC
CTCCTTCCCTCCCTATTTCTCCCCCTCCTTCCCTCCTTCCCGGCAGGCCA
ATCCTGGGACGCCTTCCCGCCACACAACTCCTCCATCGCCCTCTACCTCC
TAAACTACCCGGAGAACACCTCCATTGGACTCGGCGTAGGGACCAACCTC
CCCAAAGGCACTTGGCAATACGGGCCAGCCCGCGTCGAGAAGGTGCTCCC
CCCCCCCTCGTCCTCGCTCCCGCCCTCCTTCCCTCCCTCCCCTCGAAACC
CCACCCCTGCGTCCTGCTTCTTCCGCCTTTGTCCTTGACGGACGTTCGTC
TTTCCAAAACCAGAGCCTACGGACGTGTTGCCAGTCCTCCCGTACCCACC
CACCCTCCCTCCCTCCCTCCCTCCCTCCCTTGGCCAGGGCGAATGGATCG
ACATCCTTTTCCACATTGGGTGGTCGACCGGGCAAGATGGCTTCGTGAAC
GCCTCCGTGGAGACCGGCGGGCTGGAAACCCGGCAGACACAAGTCCTGAC
CCCCTTGGGAGG back to topCoding sequence (CDS) from alignment at CM002458.1:65497..67758- >rna1765 ID=rna1765|Name=rna1765|organism=Nannochloropsis gaditana|type=CDS|length=7007bp|location=Sequence derived from alignment at CM002458.1:65497..67758- (Nannochloropsis gaditana)
GGCGAATGGATCGACATCCTTTTCCACATTGGGTGGTCGACCGGGCAAGA
TGGCTTCGTGAACGCCTCCGTGGAGACCGGCGGGCTGGAAACCCGGCAGA
CACAAGTCCTGACCCCCTTGGGAGGGCCAATCCTGGGACGCCTTCCCGCC
ACACAACTCCTCCATCGCCCTCTACCTCCTAAACTACCCGGAGAACACCT
CCATTGGACTCGGCGTAGGGACCAACCTCCCCAAAGGCACTTGGCAATAC
GGGCCAGCCCGCGTCGAGAAGGGACGGAAGGGTGGTACGCGTGGTCGCTG
TACATCCCCCGAGACTACCCCACGGTGGCGGATCCGACCCGCCAGTGGCA
GATCCTGTGCCAATGGCACGATCAGCCCGACCTGGACGCAGCTTGTGTCC
TCGCCCGTTCGCACCGGGAACCAGTCCGTGCGGATACGCGTACGTCCTGG
CGACTACATACAGCACGGAAACCGGGCGGAAATCACGCACAACCTCGAAG
ACAGTCCAGGAACAAATCGCCTTACATGGTAGGCCACTGCCGGCTTCCAC
CTTCGTCGGATCCTTCGAGGATGGCTTCGAGGGATGGACGAGCCTGGAAG
GAGCGCAAGAAGACTCGATAGTGGGACACTTCGATTCCTTTAGCGGTGCA
AGCGGGGCGGGGCATGGCAGCATCCTTACTGGAAAGTAGGACTTCCGTCC
CTGGTCCTCGCCCTCGGTCACGAAATAAGTACGTCGTCCTCTTCCTCCTC
GCCACCTTGGTCACAAGCCATGCCCTTCCAACGCAAACGCTCACGGCAGC
ATGGGACACTGTTGCTAGCTTTGTGTCTTCCCCTGCGCTCCCGTCGACTC
GACCGACCTCTACTTTGTCTCAGGAGAAACGAGATCCCTCGACTACCATA
TCCCGACCCTCCGCTTCAGTTCCCATGCCGGATATGGACCCCCCTGTCGA
TTCCATTGAGATGACTGCAATTTCCTCACAAATCACCAAGGCATGCACAA
AGGCGAATGGATCGACATCCTTTTCCACATTGGGTGGTCGACCGGGCAAG
ATGGCTTCGTGAACGCCTCCGTGGAGACCGGCGGGCTGGAAACCCGGCAG
ACACAAGTCCTGACCCCCTTGGGAGGGCCAATCCTGGGACGCCTTCCCGC
CACACAACTCCTCCATCGCCCTCTACCTCCTAAACTACCCGGAGAACACC
TCCATTGGACTCGGCGTAGGGACCAACCTCCCCAAAGGCACTTGGCAATA
CGGGCCAGCCCGCGTCGAGAAGGGACGGAAGGGTGGTACGCGTGGTCGCT
GTACATCCCCCGAGACTACCCCACGGTGGCGGATCCGACCCGCCAGTGGC
AGATCCTGTGCCAATGGCACGATCAGCCCGACCTGGACGCAGCTTGTGTC
CTCGCCCGTTCGCACCGGGAACCAGTCCGTGCGGATACGCGTACGTCCTG
GCGACTACATACAGCACGGAAACCGGGCGGAAATCACGCACAACCTCGAA
GACAGTCCAGGAACAAATCGCCTTACATGGTAGGCCACTGCCGGCTTCCA
CCTTCGTCGGATCCTTCGAGGATGGCTTCGAGGGATGGACGAGCCTGGAA
GGAGCGCAAGAAGACTCGATAGTGGGACACTTCGATTCCTTTAGCGGTGC
AAGCGGGGCGGGGCATGGCAGCATCCTTACTGGAAAGTAGGACTTCCGTC
CCTGGTCCTCGCCCTCGGTCACGAAATAAGTACGTCGTCCTCTTCCTCCT
CGCCACCTTGGTCACAAGCCATGCCCTTCCAACGCAAACGCTCACGGCAG
CATGGGACACTGTTGCTAGCTTTGTGTCTTCCCCTGCGCTCCCGTCGACT
CGACCGACCTCTACTTTGTCTCAGGAGAAACGAGATCCCTCGACTACCAT
ATCCCGACCCTCCGCTTCAGTTCCCATGCCGGATATGGACCCCCCTGTCG
ATTCCATTGAGATGACTGCAATTTCCTCACAAATCACCAAGGCATGCACA
AAGGCGAATGGATCGACATCCTTTTCCACATTGGGTGGTCGACCGGGCAA
GATGGCTTCGTGAACGCCTCCGTGGAGACCGGCGGGCTGGAAACCCGGCA
GACACAAGTCCTGACCCCCTTGGGAGGGCCAATCCTGGGACGCCTTCCCG
CCACACAACTCCTCCATCGCCCTCTACCTCCTAAACTACCCGGAGAACAC
CTCCATTGGACTCGGCGTAGGGACCAACCTCCCCAAAGGCACTTGGCAAT
ACGGGCCAGCCCGCGTCGAGAAGGGACGGAAGGGTGGTACGCGTGGTCGC
TGTACATCCCCCGAGACTACCCCACGGTGGCGGATCCGACCCGCCAGTGG
CAGATCCTGTGCCAATGGCACGATCAGCCCGACCTGGACGCAGCTTGTGT
CCTCGCCCGTTCGCACCGGGAACCAGTCCGTGCGGATACGCGTACGTCCT
GGCGACTACATACAGCACGGAAACCGGGCGGAAATCACGCACAACCTCGA
AGACAGTCCAGGAACAAATCGCCTTACATGGTAGGCCACTGCCGGCTTCC
ACCTTCGTCGGATCCTTCGAGGATGGCTTCGAGGGATGGACGAGCCTGGA
AGGAGCGCAAGAAGACTCGATAGTGGGACACTTCGATTCCTTTAGCGGTG
CAAGCGGGGCGGGGCATGGCAGCATCCTTACTGGAAAGTAGGACTTCCGT
CCCTGGTCCTCGCCCTCGGTCACGAAATAAGTACGTCGTCCTCTTCCTCC
TCGCCACCTTGGTCACAAGCCATGCCCTTCCAACGCAAACGCTCACGGCA
GCATGGGACACTGTTGCTAGCTTTGTGTCTTCCCCTGCGCTCCCGTCGAC
TCGACCGACCTCTACTTTGTCTCAGGAGAAACGAGATCCCTCGACTACCA
TATCCCGACCCTCCGCTTCAGTTCCCATGCCGGATATGGACCCCCCTGTC
GATTCCATTGAGATGACTGCAATTTCCTCACAAATCACCAAGGCATGCAC
AAAGGCGAATGGATCGACATCCTTTTCCACATTGGGTGGTCGACCGGGCA
AGATGGCTTCGTGAACGCCTCCGTGGAGACCGGCGGGCTGGAAACCCGGC
AGACACAAGTCCTGACCCCCTTGGGAGGGCCAATCCTGGGACGCCTTCCC
GCCACACAACTCCTCCATCGCCCTCTACCTCCTAAACTACCCGGAGAACA
CCTCCATTGGACTCGGCGTAGGGACCAACCTCCCCAAAGGCACTTGGCAA
TACGGGCCAGCCCGCGTCGAGAAGGGACGGAAGGGTGGTACGCGTGGTCG
CTGTACATCCCCCGAGACTACCCCACGGTGGCGGATCCGACCCGCCAGTG
GCAGATCCTGTGCCAATGGCACGATCAGCCCGACCTGGACGCAGCTTGTG
TCCTCGCCCGTTCGCACCGGGAACCAGTCCGTGCGGATACGCGTACGTCC
TGGCGACTACATACAGCACGGAAACCGGGCGGAAATCACGCACAACCTCG
AAGACAGTCCAGGAACAAATCGCCTTACATGGTAGGCCACTGCCGGCTTC
CACCTTCGTCGGATCCTTCGAGGATGGCTTCGAGGGATGGACGAGCCTGG
AAGGAGCGCAAGAAGACTCGATAGTGGGACACTTCGATTCCTTTAGCGGT
GCAAGCGGGGCGGGGCATGGCAGCATCCTTACTGGAAAGTAGGACTTCCG
TCCCTGGTCCTCGCCCTCGGTCACGAAATAAGTACGTCGTCCTCTTCCTC
CTCGCCACCTTGGTCACAAGCCATGCCCTTCCAACGCAAACGCTCACGGC
AGCATGGGACACTGTTGCTAGCTTTGTGTCTTCCCCTGCGCTCCCGTCGA
CTCGACCGACCTCTACTTTGTCTCAGGAGAAACGAGATCCCTCGACTACC
ATATCCCGACCCTCCGCTTCAGTTCCCATGCCGGATATGGACCCCCCTGT
CGATTCCATTGAGATGACTGCAATTTCCTCACAAATCACCAAGGCATGCA
CAAAGGCGAATGGATCGACATCCTTTTCCACATTGGGTGGTCGACCGGGC
AAGATGGCTTCGTGAACGCCTCCGTGGAGACCGGCGGGCTGGAAACCCGG
CAGACACAAGTCCTGACCCCCTTGGGAGGGCCAATCCTGGGACGCCTTCC
CGCCACACAACTCCTCCATCGCCCTCTACCTCCTAAACTACCCGGAGAAC
ACCTCCATTGGACTCGGCGTAGGGACCAACCTCCCCAAAGGCACTTGGCA
ATACGGGCCAGCCCGCGTCGAGAAGGGACGGAAGGGTGGTACGCGTGGTC
GCTGTACATCCCCCGAGACTACCCCACGGTGGCGGATCCGACCCGCCAGT
GGCAGATCCTGTGCCAATGGCACGATCAGCCCGACCTGGACGCAGCTTGT
GTCCTCGCCCGTTCGCACCGGGAACCAGTCCGTGCGGATACGCGTACGTC
CTGGCGACTACATACAGCACGGAAACCGGGCGGAAATCACGCACAACCTC
GAAGACAGTCCAGGAACAAATCGCCTTACATGGTAGGCCACTGCCGGCTT
CCACCTTCGTCGGATCCTTCGAGGATGGCTTCGAGGGATGGACGAGCCTG
GAAGGAGCGCAAGAAGACTCGATAGTGGGACACTTCGATTCCTTTAGCGG
TGCAAGCGGGGCGGGGCATGGCAGCATCCTTACTGGAAAGTAGGACTTCC
GTCCCTGGTCCTCGCCCTCGGTCACGAAATAAGTACGTCGTCCTCTTCCT
CCTCGCCACCTTGGTCACAAGCCATGCCCTTCCAACGCAAACGCTCACGG
CAGCATGGGACACTGTTGCTAGCTTTGTGTCTTCCCCTGCGCTCCCGTCG
ACTCGACCGACCTCTACTTTGTCTCAGGAGAAACGAGATCCCTCGACTAC
CATATCCCGACCCTCCGCTTCAGTTCCCATGCCGGATATGGACCCCCCTG
TCGATTCCATTGAGATGACTGCAATTTCCTCACAAATCACCAAGGCATGC
ACAAAGGCGAATGGATCGACATCCTTTTCCACATTGGGTGGTCGACCGGG
CAAGATGGCTTCGTGAACGCCTCCGTGGAGACCGGCGGGCTGGAAACCCG
GCAGACACAAGTCCTGACCCCCTTGGGAGGGCCAATCCTGGGACGCCTTC
CCGCCACACAACTCCTCCATCGCCCTCTACCTCCTAAACTACCCGGAGAA
CACCTCCATTGGACTCGGCGTAGGGACCAACCTCCCCAAAGGCACTTGGC
AATACGGGCCAGCCCGCGTCGAGAAGGGACGGAAGGGTGGTACGCGTGGT
CGCTGTACATCCCCCGAGACTACCCCACGGTGGCGGATCCGACCCGCCAG
TGGCAGATCCTGTGCCAATGGCACGATCAGCCCGACCTGGACGCAGCTTG
TGTCCTCGCCCGTTCGCACCGGGAACCAGTCCGTGCGGATACGCGTACGT
CCTGGCGACTACATACAGCACGGAAACCGGGCGGAAATCACGCACAACCT
CGAAGACAGTCCAGGAACAAATCGCCTTACATGGTAGGCCACTGCCGGCT
TCCACCTTCGTCGGATCCTTCGAGGATGGCTTCGAGGGATGGACGAGCCT
GGAAGGAGCGCAAGAAGACTCGATAGTGGGACACTTCGATTCCTTTAGCG
GTGCAAGCGGGGCGGGGCATGGCAGCATCCTTACTGGAAAGTAGGACTTC
CGTCCCTGGTCCTCGCCCTCGGTCACGAAATAAGTACGTCGTCCTCTTCC
TCCTCGCCACCTTGGTCACAAGCCATGCCCTTCCAACGCAAACGCTCACG
GCAGCATGGGACACTGTTGCTAGCTTTGTGTCTTCCCCTGCGCTCCCGTC
GACTCGACCGACCTCTACTTTGTCTCAGGAGAAACGAGATCCCTCGACTA
CCATATCCCGACCCTCCGCTTCAGTTCCCATGCCGGATATGGACCCCCCT
GTCGATTCCATTGAGATGACTGCAATTTCCTCACAAATCACCAAGGCATG
CACAAAGGCGAATGGATCGACATCCTTTTCCACATTGGGTGGTCGACCGG
GCAAGATGGCTTCGTGAACGCCTCCGTGGAGACCGGCGGGCTGGAAACCC
GGCAGACACAAGTCCTGACCCCCTTGGGAGGGCCAATCCTGGGACGCCTT
CCCGCCACACAACTCCTCCATCGCCCTCTACCTCCTAAACTACCCGGAGA
ACACCTCCATTGGACTCGGCGTAGGGACCAACCTCCCCAAAGGCACTTGG
CAATACGGGCCAGCCCGCGTCGAGAAGGGACGGAAGGGTGGTACGCGTGG
TCGCTGTACATCCCCCGAGACTACCCCACGGTGGCGGATCCGACCCGCCA
GTGGCAGATCCTGTGCCAATGGCACGATCAGCCCGACCTGGACGCAGCTT
GTGTCCTCGCCCGTTCGCACCGGGAACCAGTCCGTGCGGATACGCGTACG
TCCTGGCGACTACATACAGCACGGAAACCGGGCGGAAATCACGCACAACC
TCGAAGACAGTCCAGGAACAAATCGCCTTACATGGTAGGCCACTGCCGGC
TTCCACCTTCGTCGGATCCTTCGAGGATGGCTTCGAGGGATGGACGAGCC
TGGAAGGAGCGCAAGAAGACTCGATAGTGGGACACTTCGATTCCTTTAGC
GGTGCAAGCGGGGCGGGGCATGGCAGCATCCTTACTGGAAAGTAGGACTT
CCGTCCCTGGTCCTCGCCCTCGGTCACGAAATAAGTACGTCGTCCTCTTC
CTCCTCGCCACCTTGGTCACAAGCCATGCCCTTCCAACGCAAACGCTCAC
GGCAGCATGGGACACTGTTGCTAGCTTTGTGTCTTCCCCTGCGCTCCCGT
CGACTCGACCGACCTCTACTTTGTCTCAGGAGAAACGAGATCCCTCGACT
ACCATATCCCGACCCTCCGCTTCAGTTCCCATGCCGGATATGGACCCCCC
TGTCGATTCCATTGAGATGACTGCAATTTCCTCACAAATCACCAAGGCAT
GCACAAA back to top
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