EWM28912.1, cds1761 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28912.1 vs. NCBI_GenBank
Match: gi|585111372|gb|EWM28912.1| (hypothetical protein Naga_100869g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 680.248 bits (1754), Expect = 0.000e+0 Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0 Query: 1 MTAISSQITKACTKDTSIPLAVQAGRGMAASLLESRTSVPGPRPRSRNKYVVLFLLATLVTSHALPTQTLTAAWDTVASFVSSPALPSTRPTSTLSQEKRDPSTTISRPSASVPMPDMDPPVDSIEEQIALHGRPLPASTFVGSFEDGFEGWTSLEGAQEDSIVLVSSPVRTGNQSVRIRVRPGDYIQHGNRAEITHNLEDSPGTEGWYAWSLYIPRDYPTVADPTRQWQILCQWHDQPDLDAGQSWDAFPPHNSSIALYLLNYPENTSIGLGVGTNLPKGTWQYGPARVEKGEWIDILFHIGWSTGQDGFVNASVETGGLETRQTQVLTPLGG 334 MTAISSQITKACTKDTSIPLAVQAGRGMAASLLESRTSVPGPRPRSRNKYVVLFLLATLVTSHALPTQTLTAAWDTVASFVSSPALPSTRPTSTLSQEKRDPSTTISRPSASVPMPDMDPPVDSIEEQIALHGRPLPASTFVGSFEDGFEGWTSLEGAQEDSIVLVSSPVRTGNQSVRIRVRPGDYIQHGNRAEITHNLEDSPGTEGWYAWSLYIPRDYPTVADPTRQWQILCQWHDQPDLDAGQSWDAFPPHNSSIALYLLNYPENTSIGLGVGTNLPKGTWQYGPARVEKGEWIDILFHIGWSTGQDGFVNASVETGGLETRQTQVLTPLGG Sbjct: 1 MTAISSQITKACTKDTSIPLAVQAGRGMAASLLESRTSVPGPRPRSRNKYVVLFLLATLVTSHALPTQTLTAAWDTVASFVSSPALPSTRPTSTLSQEKRDPSTTISRPSASVPMPDMDPPVDSIEEQIALHGRPLPASTFVGSFEDGFEGWTSLEGAQEDSIVLVSSPVRTGNQSVRIRVRPGDYIQHGNRAEITHNLEDSPGTEGWYAWSLYIPRDYPTVADPTRQWQILCQWHDQPDLDAGQSWDAFPPHNSSIALYLLNYPENTSIGLGVGTNLPKGTWQYGPARVEKGEWIDILFHIGWSTGQDGFVNASVETGGLETRQTQVLTPLGG 334
BLAST of EWM28912.1 vs. NCBI_GenBank
Match: gi|1088524256|gb|OHD53794.1| (hypothetical protein A2Y33_02765 [Spirochaetes bacterium GWF1_51_8]) HSP 1 Score: 105.145 bits (261), Expect = 8.216e-23 Identity = 64/178 (35.96%), Postives = 92/178 (51.69%), Query Frame = 0 Query: 141 FVGSFEDGFEGWTSLEGAQEDSIVLVSSPVRTGNQSVRIRVRPGDYIQHGNRAEITHNLEDSPGTEGWYAWSLYIPRDYPTVADPTRQWQILCQWHDQPDLDAGQSWDAFPPHNSSIALYLLNYPENTSIGLGVGTNLPKGT-WQYGPARVEKGEWIDILFHIGWSTGQDGFVNASVE 317 FV FEDG G LE + I +V++PVRTG +V+ + PG GNR E+ + D G E +Y WS + Y WQI+ QWHDQPD A +SW +FP ++ ++ +NY N + + + + T W+YG V G+W D+ H+ WS DGFV A + Sbjct: 33 FVSDFEDGTTGVWGLEQGRPGLIAVVTNPVRTGTYAVKFTILPGVTWGSGNRTEMKYFNIDPYGEEVYYGWSCMLAPGYTD----NGLWQIIGQWHDQPDPFADESWSSFPKNSPPLS---INYTSNRVYLVVIHSGIKNKTMWEYG-VPVGYGQWFDVAVHVKWSMLSDGFVEAWIN 202
BLAST of EWM28912.1 vs. NCBI_GenBank
Match: gi|1088020430|gb|OGY92001.1| (hypothetical protein A3B31_03345 [Candidatus Komeilibacteria bacterium RIFCSPLOWO2_01_FULL_53_11]) HSP 1 Score: 101.679 bits (252), Expect = 6.234e-21 Identity = 70/197 (35.53%), Postives = 102/197 (51.78%), Query Frame = 0 Query: 145 FEDGFE------GWTSL--EGAQE----DSIVLVSSPVRTGNQSVRIRVRPGDYIQHGNR------AEI-----------THNLEDSPGTEGWYAWSLYIPRDYPTVADPTRQWQILCQWHDQPDLDAGQSWDAFPPHNSSIALYLLNYPENTSIGLGVGTNLPKGTWQYGPARVEKGEWIDILFHIGWSTGQDGFV 312 F +GFE GWTSL GA+ DSI +V+ PVR G ++++ VR GD++ G+R AE+ T E GTE WYAWS+ IP DY WQI+ QWHDQP+ G+S + P I+++ + +S G G A +++G+WI+++FHIG+S G+DGF+ Sbjct: 85 FHEGFENGALSPGWTSLALHGAKRIEDSDSIQIVTDPVRKGTHALKVTVRDGDWVYFGDRLNDKERAELIRQNSCRQGTCTFGNEGREGTELWYAWSILIPEDY-QYDRVGHDWQIMGQWHDQPE--PGESPSGYSP---PISVHYRSTGGQSSFVFTYGLRQTGGPITEVEAPIKRGKWINLMFHIGFSQGKDGFL 275
BLAST of EWM28912.1 vs. NCBI_GenBank
Match: gi|1088523736|gb|OHD53308.1| (hypothetical protein A2014_06180 [Spirochaetes bacterium GWF1_49_6]) HSP 1 Score: 89.7373 bits (221), Expect = 2.989e-17 Identity = 61/178 (34.27%), Postives = 88/178 (49.44%), Query Frame = 0 Query: 141 FVGSFEDGFEGWTSLEGAQEDSIVLVSSPVRTGNQSVRIRVRPGDYIQHGNRAEITHNLEDSPGTEGWYAWSLYIPRDYPTVADPTRQWQILCQWHDQPDLDAGQSWDAFPPHNSSIAL-YLLNYPENTSIGLGVGTNLPKGTWQYGPARVEKGEWIDILFHIGWSTGQDGFVNASVE 317 FV FEDG G +LE I + S+ VRTGN +V+ + P GNR E+ + D E +Y WS + Y +WQI+ QWHDQPD + SW +FP ++ I++ Y+ N + G+ + + W+ G A V G W D++ H+ WS DGFV V Sbjct: 31 FVSGFEDGTTGVWNLEQGLPGLIEVQSNLVRTGNYAVKFTILPNVTWHTGNRTEMAYFNMDPYVEEVYYGWSCMLAPGYTD----NGKWQIIGQWHDQPDPFSNDSWSSFPRNSPPISINYISNKVYLNILYSGIQSRI---MWENG-ATVSYGVWFDVVVHVKWSMYGDGFVEGWVN 200
BLAST of EWM28912.1 vs. NCBI_GenBank
Match: gi|653184953|ref|WP_027421373.1| (hypothetical protein [Crocinitomix catalasitica]) HSP 1 Score: 82.0333 bits (201), Expect = 2.780e-14 Identity = 61/207 (29.47%), Postives = 88/207 (42.51%), Query Frame = 0 Query: 135 PLPASTFVGSFEDGFEGWTSLEGAQE----DSIVLVSSPVRTGNQSVRIRVRPGDYIQHGNRAEITHNLEDSPGTEGWYAWSLYIPRDYPTV----ADPTRQWQILCQWHDQPDLDAGQSWDAFPPHNSS--IALYLLNYPENTSIGLGVGTNLPKGTWQYG---------------------PARVEKGEWIDILFHIGWSTGQDG 310 PL F FE E W + G E D +++ + G QS + + P + GNRAE+T + + G + WY +S YIP DY V A+ WQ+L QWH QP D G+ W + N+S I +Y N+ + T I + P+ T YG + KGEW + F+I W+ G Sbjct: 30 PLQDINF--GFETVLEDWVAYGGGGERNDPDDVMISTDTKIEGEQSCKFTISPESIVAGGNRAELTFDQKAIEGDDTWYEYSFYIPVDYEDVDLRDAEDRVNWQVLGQWHHQPVFDDGEDWIDYTGKNASPPIGIY-YNHFDTTDIHYKNILSDPEATSVYGFNPDWHDVSTISIVYGGKSIAIREITKGEWHRLKFNILWAENNSG 233
BLAST of EWM28912.1 vs. NCBI_GenBank
Match: gi|1213732004|gb|OWY64767.1| (hypothetical protein B7486_45510 [cyanobacterium TDX16]) HSP 1 Score: 80.8777 bits (198), Expect = 6.706e-14 Identity = 57/174 (32.76%), Postives = 91/174 (52.30%), Query Frame = 0 Query: 140 TFVGSFEDGFEGWTSLEGAQEDSIVLVSSPVRTGNQSVRIRVRPGD-YIQHGNRAEITHNLEDSPGTEGWYAWSLYIPRDYPTVADPTRQWQILCQWHDQPDLDAGQSWDAFPPHNSSI--ALYLLNYPENTSIGLGVGTNLPKGTWQYGPARVEKGEWIDILFHIGWSTGQDG 310 F+ FE G+ W + E E S LV+SPVR G Q+V+ ++ D I RAE+ E P +E WY +S+++P DY DP+ + I+ QWHD PD + G++W + P + S ++LN ++ T +P+G + G+W D +FH+ WS+ +G Sbjct: 46 VFLSDFESGYSEWGT-EFHYEYSAQLVNSPVRAGKQAVKFLLKKEDTRIDGVKRAELRLG-EVPPDSEIWYGFSVFLPSDYQ--QDPSSE--IIAQWHDLPDKNLGETWKS-PALSLSTKDGRFILNRKWDSK----RVTVVPEGKETIDLGLYQTGKWTDFVFHVKWSSNSNG 208
BLAST of EWM28912.1 vs. NCBI_GenBank
Match: gi|504965710|ref|WP_015152812.1| (hypothetical protein [Chroococcidiopsis thermalis] >gi|428007698|gb|AFY86261.1| hypothetical protein Chro_0715 [Chroococcidiopsis thermalis PCC 7203]) HSP 1 Score: 79.337 bits (194), Expect = 2.385e-13 Identity = 54/174 (31.03%), Postives = 91/174 (52.30%), Query Frame = 0 Query: 140 TFVGSFEDGFEGWTSLEGAQEDSIVLVSSPVRTGNQSVRIRVRPGDYIQHG-NRAEITHNLEDSPGTEGWYAWSLYIPRDYPTVADPTRQWQILCQWHDQPDLDAGQSWDAFPPHNSSI--ALYLLNYPENTSIGLGVGTNLPKGTWQYGPARVEKGEWIDILFHIGWSTGQDG 310 F+ FE G+ W + E S +V+SP+R GNQ+++ ++ D +G RAE+ E P +E WY +S+++P DY DP+ +I+ QWHD PD + G+ W + P + S ++LN ++ T +P+G + G+W D +F + WS+G +G Sbjct: 46 VFLSDFESGYSEWGT-ELCCNYSAEIVNSPIRAGNQAIKFTLKKEDARLYGVKRAELKLG-EVPPDSEIWYGFSVFLPSDYQ--QDPSS--EIIAQWHDLPDKNLGEKWKS-PALSLSTKDGKFILNRKWDSK----RVTVVPEGKEVVDLGLYQTGKWTDFVFRVKWSSGSNG 208
BLAST of EWM28912.1 vs. NCBI_GenBank
Match: gi|505161822|ref|WP_015348924.1| (lipoprotein [Myxococcus stipitatus] >gi|441487968|gb|AGC44663.1| putative lipoprotein [Myxococcus stipitatus DSM 14675]) HSP 1 Score: 77.411 bits (189), Expect = 3.924e-12 Identity = 56/176 (31.82%), Postives = 82/176 (46.59%), Query Frame = 0 Query: 141 FVGSFEDGFEG-WTSLEGAQEDSIVLVSSPVRTGNQSVRIRVRPGD--YIQHGNRAEITHNLEDSPGTEGWYAWSLYIPRDYPTVADPTRQWQILCQWHDQPDLDAGQSWDAFPPHNSSIALYLLNYPENTSIGLGVGTNLPKGTWQYGPARVEKGEWIDILFHIGWS-TGQDGFV 312 +VG FE G WT + D + +VSSP R G S++ VR GD GNR E+ ++ G+E +Y WS +P + WQ+ QWH D DAG S PP + Y+ + L +G N W+ + +G+W+D +FH+ WS + GFV Sbjct: 195 WVGDFESGDRNQWTRAQMVSADRLAVVSSPRRQGGYSLKATVRHGDDPINSSGNRNELVRMTREATGSEYYYRWSTMFDSTFPNA----KTWQLFTQWHQ--DADAGGS----PP----VEFYVY----GDEVRLNIGGNPGTIVWR---TPLVRGKWMDFIFHVRWSPDAKVGFV 349
BLAST of EWM28912.1 vs. NCBI_GenBank
Match: gi|819029804|ref|WP_046713141.1| (carbohydrate-binding protein [Myxococcus fulvus] >gi|817711910|gb|AKF81111.1| carbohydrate-binding protein [Myxococcus fulvus 124B02] >gi|1095409473|emb|SEU32887.1| F5/8 type C domain-containing protein [Myxococcus fulvus]) HSP 1 Score: 77.0258 bits (188), Expect = 5.262e-12 Identity = 54/181 (29.83%), Postives = 81/181 (44.75%), Query Frame = 0 Query: 141 FVGSFEDGFEG-WTSLEGAQEDSIVLVSSPVRTGNQSVRIRVRPGD--YIQHGNRAEITHNLEDSPGTEGWYAWSLYIPRDYPTVADPTRQWQILCQWHDQPDLDAGQSWDAFPPHNSSIALYLLNYPENTSIGLGVGTNLPKGTWQYGPARVEKGEWIDILFHIGWST-GQDGFVNASVE 317 +VG FE G WT + D + LVSSP R G +++ V+ GD GNR E+ ++ G+E +Y WS +P V WQ+ QWH + D G PP + Y+ + L +G N W+ A + + W+D +FH+ WS + GFV V+ Sbjct: 193 WVGDFETGDRTQWTRAQMVSSDRLALVSSPKRQGGYALKATVKKGDDPINSSGNRNELVRMTKEPSGSEYYYRWSTMFDSTFPNV----NTWQLFTQWHQESDTVGGS-----PP----VEFYVY----GNEVRLNIGGNPGTIVWR---APLVRARWMDFIFHVRWSADAKVGFVELYVD 353
BLAST of EWM28912.1 vs. NCBI_GenBank
Match: gi|1113622261|gb|OJY81213.1| (hypothetical protein BGP14_08395 [Sphingobacteriales bacterium 44-15]) HSP 1 Score: 75.0998 bits (183), Expect = 5.835e-12 Identity = 57/182 (31.32%), Postives = 82/182 (45.05%), Query Frame = 0 Query: 142 VGSFEDGFE------GWTSLEGAQEDSIVLVSSPVRTGNQSVRIRVRPGD-YIQHGNRAEITHNLEDSPGTEGWYAWSLYIPRDYPTVADPTRQWQILCQWHDQPDLDAGQSWDAFPPHNSSIALYLLNYPENTSIGLG---VGTNLP-KGTWQYGPARVEKGEWIDILFHIGWSTGQDGFV 312 + D FE W +E SI S ++GN S+R +R D + +G RAEI E SP E WY +S ++P +Y + P +IL QWH+ PD D G+ W + PP ++L+ N I V TN G E G W + +FH+ +S +DG V Sbjct: 24 INKLSDSFEEENFITNWGGIEKCCAYSIQRSDSVAKSGNYSLRFELRKDDSLVANGKRAEIKLKAEASPNVERWYRFSYFLPDNYKNDSIP----EILAQWHEIPDWDLGEDWRS-PP----LSLFTQNGQWKFLIMWATDKVNTNKTISGRKMIDLGEYETGRWTEWIFHLYFSYKEDGLV 196 The following BLAST results are available for this feature:
BLAST of EWM28912.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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