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Properties
| Property Name | Value |
|---|
| Product | protein kinase and ribonuclease |
| Orig transcript id | gnl|cribi|Naga_100511g1.222.mrna |
| Orig protein id | gnl|cribi|Naga_100511g1.222 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:7638..9162 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1742 ID=rna1742|Name=rna1742|organism=Nannochloropsis gaditana|type=mRNA|length=2323bp
AAGCATTTGCCTACCATCGAGTCAGCAACTCCACTCGCATTACAAAAGGT
TTCAGGCCTTGTGGCGTCTGAACTCATTAATGCGCTTGCTCCTGAGGTTC
CGACTGCCAAAAGCAATAAGAGGAGCCCAAGGTGCAGCAGATAATGTGAC
CTGAAGGCGCAGTTCTGATGCTTACTTGAAGCTCTTCTTATCCACCATAT
TCCGTGTACTCGTTGTGGGACGCAGACAGGCAATATCTGCATTCGAAGAT
CTGTGGACGTGTAAATGTAATGAGTTGCCGCGTCTTTCAAGTCTTTTATT
TGTCTTCAGGCAGGGCAAGCTTCCTCTGTCCTTCAAGTATATGATCTCGC
CTCGCAAGTGCTCCACTCTCTTTAACCAGAGCAGTGTTTCGCCATTCCTT
GTGTTCTGTACCCTGTCTAACGACCCCACACCTTCCGATGCAATACATAC
AGGCCATTAGGGATGCAACTCGTGCTATGGTATTTTTTGTGGTAGATAGA
GGCAGATGAAGGGCAGAGGCGCGAGGACGGGCCCCTACCACCACGTACCA
GTACTACTAGAAGTAGCCGCATTTGCGTTCTTGCTTCAGACTCTCCACAT
GTCTCCTCAAACTCTGGCCGCCCGATGTAGTCTTTCCAAGACCACTGCTC
CTACAGCCTCACGGTCGTGCTCTCATTTGGCTGCCTTCGCCGCAGCATCG
AAGCCTCCTGCTTCCTCTCCTATGGAGGGTACTTTCACTCGCCCCCCTTT
TATCTCGCGTCCATTACTTCTCGACCGCGGCACTGTCCAGCGCTTGTGGG
GGATAGAGCCAGAGGGCATTACTTACATTCCACCAACTGTTTGGGAGACT
GAAGCAGAGAGGCACAAGGCGCAGATGCTGGAACTCATGGGCGGATCGGT
GAAGCATGACCACAGACACCCGGTCTTCAACTTCCTCTTCGAGGTGAGTT
GCCGGGTAGGCCAAGGAGAGAGCGTGCATTATTCATGAAGTGCCAGGGAT
ATAGGGAGTAAATTGGATGTATGGGCTGATATATGGCCTTCGTTCTTGCT
ACGTGGCTTCCCACGGCTGTACAGATACGAGGTTATCCGTTTGATCGGGG
GGCGCACGGAACAACAATTTTAACTCTCCACGCTTTTCCTACTTCATTTG
CTCCTGTTAAACCCTGACACAGTACTACCACTTCAAGTCCCAGTCGCTCC
TGGACTACTCAGCGGGCGGGGAGCCTGTGGTCCTCCTGCTAGGGGAAGCC
GGAAGCGAGGGAGATACACAAAGGGATAGCGGAGGCGCCGGAGAGCGAGA
GAAAGAGGAAGCGACGGACTGTCTCCCAAGCATCCTAGCGAGTAAAGTCG
TCCCAGTGCAGGCTGAAAAGGCCGGGGCCAAATATGGGATGGTGCAGGGG
GTTGGCTGGCTCCCTCTGCCCGGCCGAGTTTCTTTCACGCGCAAGCACTT
GGAGGCCCTGCGATTGGGGAGGGAGATATTGCGGACCACGCAAAGCCGCC
CACCTTTCTTCTTTTGTCACGGCGCGCACGAGGTAAGCATGCGATTGTGC
GAGGGGCGCATTCAATAGCTTTGCATGCTATCCTGTTTATTTCTTACCTG
TCCGCCCCACTGTTCTTTATCGCTCGCCTCTCGCTCCAGTGGGCGATGCT
TTATCACCCTACCTCCTCAGCGCACCCACCTCCGCGCAAGTACCAGGATA
GTCTGCCCCTGCGGATTTCCCAAACGACCCTCAATGGCTTTGTGGAAAGC
CGGCCCATCCGCTGCACCCACTACGACGCCTTCCGCTTCTTCGCACCCGA
GGCCCGCCCTCTCAACGTCTGGGGCCAGGACTTGAGTGAGGCTCGCTCGC
ACGGACAGCTCGCGCACGAGCAACCCGGCTGCCTCCATGCCAACATGGAT
TTGTTCAAATGGGCCGTGAAGTTGGGGCCTTACGCGCCCAGCGACTTGGT
GAGACAGACTTTGGAATTGGCTGTGGCTTGCAGGGTGGTGGATATGCGTG
CTTCGCCCTACGACCTCAGCCCTCTGGTCTTGCCGGTGGGAAAAGGGCGC
GGCATGCCCAGTGGATATCGCTTTGATGCGTCGCCGATCAAGATCGAAAC
AGAGGAGGGAAGAAAAGAATATCAGGCGGAGCAACAAGCTCTCTTCGACA
AAGCCCAGCCGCTGCGAACGCGACTATTGAATGTATATGACTTATTCTTC
CGAATGTGGGAAATCGAAGAAGACCTCAAAGTACAAAGTGAAGAAGTCTG
AGTCGTTGGTGAGGGGTTTTTGGCATGGGCTATCTCATGTGCTATCTGTC
TTGCTGGCTGATGTGGTCTTTAA back to topprotein sequence of rna1742 >rna1742-protein ID=rna1742-protein|Name=rna1742|organism=Nannochloropsis gaditana|type=polypeptide|length=448bp
MMITPLENSFSNPGSARRVAQHAAHRPQGRRKRRSGPRLGIGRLTLCFLL
FLPGLLLVLASADFVSGDDSNARAPDPSALPVMHEDAPDSPPFPPPPPPP
RASTDQPRSDDEALLIVGTVDGWVHAVDSAGGVAWSFDSGAPLVTSYQGY
DHEQPSSAPSAPPFPVLIPGVDGSLLVHTPGKGIQRLPLTAGQLVDRAPF
LAADGRTLYTGARSSEALMIDLDAGTVVQRFSGPSAEKIAHMIDPRLHTP
TLAPAPSPPSASAPPSPHPSRKAKRRQLLWLGRVEHRLRAVDSMSGQELW
NLTVSELTPLFPSGPLPASAFSSSRGGGGEEASPPAPGSSGPSSGWSTRK
LLSFAPDSKGGARQRLGPSTAALDWEGHRQGGLLTPTQAAALDVLGPGPG
WGGAGPLVATPEGGVHRRDPGSGEARLLVALGSAPVTAFVVAPRGGGP back to topmRNA from alignment at CM002458.1:7638..9162+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1742 ID=rna1742|Name=rna1742|organism=Nannochloropsis gaditana|type=mRNA|length=1525bp|location=Sequence derived from alignment at CM002458.1:7638..9162+ (Nannochloropsis gaditana)
ATGCACGCATGCTCATACATATCCATCTGCACAGGGGAAACGTGCCCAAG
TCGTGAGTAGATCGGCGCGGTGGCTTTTGTGAGGAGAGGATGTTGAGCGC
AAGTTAGGCGATGAGCTCAATTGCACATCAGAGAAGACCATGAAGAGACC
AAGCGTGCCGGCTCAGATGCTGCTTCATTGATGATGATCACGCCTCTGGA
AAACAGCTTTTCAAACCCGGGGAGCGCGCGTCGAGTGGCTCAGCATGCGG
CACACCGCCCCCAGGGTAGGCGGAAACGCCGGTCGGGTCCTAGACTTGGC
ATTGGCAGACTGACTCTCtgttttctcctttttttgcccggtcttctcct
tgtcctcgccaGTGCCGATTTTGTCAGTGGCGATGACAGTAATGCCCGCG
CTCCAGATCCTTCCGCGCTTCCTGTCATGCACGAGGATGCGCCGGAcagt
cctccttttccccccccgcctccgcccccacgcGCCTCCACCGACCAGCC
CCGAAGTGACGACGAAGCCCTCCTGATAGTGGGGACTGTGGATGGCTGGG
TGCATGCCGTCGACTCCGCAGGAGGTGTGGCCTGGTCCTTCGACTCCGGC
GCCCCCCTGGTCACGTCCTACCAAGGGTACGACCACGagcagccttcctc
cgccccctcggccccccccttccccgtcctaATCCCCGGCGTGGACGGCA
GCCTGCTCGTGCACACCCCTGGGAAAGGCATCCAGCGGCTGCCCCTGACG
GCGGGACAGCTGGTGGACCGCGCCCCCTTCCTGGCTGCGGACGGGCGGAC
TCTGTACACAGGGGCGCGGAGCTCGGAGGCCCTCATGATCGATCTTGACG
CGGGCACCGTCGTCCAGCGGTTCTCAGGCCCCAGCGCCGAAAAAATCGCC
CACATGATCGACCCCCGCCTGCACACCCCTACCctggcgcccgccccctc
cccgccctccgcctccgcgccgccctccccccatccgaGCAGGAAGGCGA
AGCGGCGGCAGTTGCTCTGGCTGGGCCGCGTCGAGCACCGGCTGCGGGCC
GTCGACTCCATGTCAGGCCAGGAGCTCTGGAATCTGACCGTCTCGGAGCT
gacccctctctttccctccggccccctccctgcctccgccttctcctcct
cccgcgggggcgggggggaagaggcctccccccccgcccccgggaGCAGC
GGCCCAAGCAGCGGGTGGTCGACCCGAaagctcctctccttcgcaccCGA
CAGCAAGGGCGGGGCCCGGCAGCGCCTGGGCCCGTCGACGGCAGCCTTAG
ACTGGGAGGGACACCGGCAAGGTGGTCTCCTCACGCCCACGCAGGCGGCG
GCTCTGGACGTGCTGGGGCCGGGGCccggctgggggggggcaggtcCTCT
GGTGGCCAccccggagggaggcgtccaTAGGCGGGACCCGGGctcggggg
aggcgaggctcCTGGTCGCCTTGGGGTCGGCGCCGGTGACGGCCTTCGTG
GTGGcgcctcgggggggaggtccgT back to topCoding sequence (CDS) from alignment at CM002458.1:7638..9162+ >rna1742 ID=rna1742|Name=rna1742|organism=Nannochloropsis gaditana|type=CDS|length=1345bp|location=Sequence derived from alignment at CM002458.1:7638..9162+ (Nannochloropsis gaditana)
ATGATGATCACGCCTCTGGAAAACAGCTTTTCAAACCCGGGGAGCGCGCG
TCGAGTGGCTCAGCATGCGGCACACCGCCCCCAGGGTAGGCGGAAACGCC
GGTCGGGTCCTAGACTTGGCATTGGCAGACTGACTCTCtgttttctcctt
tttttgcccggtcttctccttgtcctcgccaGTGCCGATTTTGTCAGTGG
CGATGACAGTAATGCCCGCGCTCCAGATCCTTCCGCGCTTCCTGTCATGC
ACGAGGATGCGCCGGAcagtcctccttttccccccccgcctccgccccca
cgcGCCTCCACCGACCAGCCCCGAAGTGACGACGAAGCCCTCCTGATAGT
GGGGACTGTGGATGGCTGGGTGCATGCCGTCGACTCCGCAGGAGGTGTGG
CCTGGTCCTTCGACTCCGGCGCCCCCCTGGTCACGTCCTACCAAGGGTAC
GACCACGagcagccttcctccgccccctcggccccccccttccccgtcct
aATCCCCGGCGTGGACGGCAGCCTGCTCGTGCACACCCCTGGGAAAGGCA
TCCAGCGGCTGCCCCTGACGGCGGGACAGCTGGTGGACCGCGCCCCCTTC
CTGGCTGCGGACGGGCGGACTCTGTACACAGGGGCGCGGAGCTCGGAGGC
CCTCATGATCGATCTTGACGCGGGCACCGTCGTCCAGCGGTTCTCAGGCC
CCAGCGCCGAAAAAATCGCCCACATGATCGACCCCCGCCTGCACACCCCT
ACCctggcgcccgccccctccccgccctccgcctccgcgccgccctcccc
ccatccgaGCAGGAAGGCGAAGCGGCGGCAGTTGCTCTGGCTGGGCCGCG
TCGAGCACCGGCTGCGGGCCGTCGACTCCATGTCAGGCCAGGAGCTCTGG
AATCTGACCGTCTCGGAGCTgacccctctctttccctccggccccctccc
tgcctccgccttctcctcctcccgcgggggcgggggggaagaggcctccc
cccccgcccccgggaGCAGCGGCCCAAGCAGCGGGTGGTCGACCCGAaag
ctcctctccttcgcaccCGACAGCAAGGGCGGGGCCCGGCAGCGCCTGGG
CCCGTCGACGGCAGCCTTAGACTGGGAGGGACACCGGCAAGGTGGTCTCC
TCACGCCCACGCAGGCGGCGGCTCTGGACGTGCTGGGGCCGGGGCccggc
tgggggggggcaggtcCTCTGGTGGCCAccccggagggaggcgtccaTAG
GCGGGACCCGGGctcgggggaggcgaggctcCTGGTCGCCTTGGGGTCGG
CGCCGGTGACGGCCTTCGTGGTGGcgcctcgggggggaggtccgT back to top
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