EWM28935.1, cds1738 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28935.1 vs. NCBI_GenBank
Match: gi|585111402|gb|EWM28935.1| (protein kinase and ribonuclease, partial [Nannochloropsis gaditana]) HSP 1 Score: 867.07 bits (2239), Expect = 0.000e+0 Identity = 448/448 (100.00%), Postives = 448/448 (100.00%), Query Frame = 0
Query: 1 MMITPLENSFSNPGSARRVAQHAAHRPQGRRKRRSGPRLGIGRLTLCFLLFLPGLLLVLASADFVSGDDSNARAPDPSALPVMHEDAPDSPPFPPPPPPPRASTDQPRSDDEALLIVGTVDGWVHAVDSAGGVAWSFDSGAPLVTSYQGYDHEQPSSAPSAPPFPVLIPGVDGSLLVHTPGKGIQRLPLTAGQLVDRAPFLAADGRTLYTGARSSEALMIDLDAGTVVQRFSGPSAEKIAHMIDPRLHTPTLAPAPSPPSASAPPSPHPSRKAKRRQLLWLGRVEHRLRAVDSMSGQELWNLTVSELTPLFPSGPLPASAFSSSRGGGGEEASPPAPGSSGPSSGWSTRKLLSFAPDSKGGARQRLGPSTAALDWEGHRQGGLLTPTQAAALDVLGPGPGWGGAGPLVATPEGGVHRRDPGSGEARLLVALGSAPVTAFVVAPRGGGP 448
MMITPLENSFSNPGSARRVAQHAAHRPQGRRKRRSGPRLGIGRLTLCFLLFLPGLLLVLASADFVSGDDSNARAPDPSALPVMHEDAPDSPPFPPPPPPPRASTDQPRSDDEALLIVGTVDGWVHAVDSAGGVAWSFDSGAPLVTSYQGYDHEQPSSAPSAPPFPVLIPGVDGSLLVHTPGKGIQRLPLTAGQLVDRAPFLAADGRTLYTGARSSEALMIDLDAGTVVQRFSGPSAEKIAHMIDPRLHTPTLAPAPSPPSASAPPSPHPSRKAKRRQLLWLGRVEHRLRAVDSMSGQELWNLTVSELTPLFPSGPLPASAFSSSRGGGGEEASPPAPGSSGPSSGWSTRKLLSFAPDSKGGARQRLGPSTAALDWEGHRQGGLLTPTQAAALDVLGPGPGWGGAGPLVATPEGGVHRRDPGSGEARLLVALGSAPVTAFVVAPRGGGP
Sbjct: 1 MMITPLENSFSNPGSARRVAQHAAHRPQGRRKRRSGPRLGIGRLTLCFLLFLPGLLLVLASADFVSGDDSNARAPDPSALPVMHEDAPDSPPFPPPPPPPRASTDQPRSDDEALLIVGTVDGWVHAVDSAGGVAWSFDSGAPLVTSYQGYDHEQPSSAPSAPPFPVLIPGVDGSLLVHTPGKGIQRLPLTAGQLVDRAPFLAADGRTLYTGARSSEALMIDLDAGTVVQRFSGPSAEKIAHMIDPRLHTPTLAPAPSPPSASAPPSPHPSRKAKRRQLLWLGRVEHRLRAVDSMSGQELWNLTVSELTPLFPSGPLPASAFSSSRGGGGEEASPPAPGSSGPSSGWSTRKLLSFAPDSKGGARQRLGPSTAALDWEGHRQGGLLTPTQAAALDVLGPGPGWGGAGPLVATPEGGVHRRDPGSGEARLLVALGSAPVTAFVVAPRGGGP 448
BLAST of EWM28935.1 vs. NCBI_GenBank
Match: gi|298712889|emb|CBJ33405.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 97.8265 bits (242), Expect = 7.070e-18 Identity = 74/217 (34.10%), Postives = 109/217 (50.23%), Query Frame = 0
Query: 98 PPPRASTDQPRSDDEA---LLIVGTVDGWVHAVD-SAGGVAWSFDSGAPLVTSYQGYDHEQPSSAPSAPPFPVLIPGVDGSLLVHTPGKGIQRLPLTAGQLVDRAPFLAADGRTLYTGARSSEALMIDLDAGTVVQRFSGPSAEKIAHMIDPRLHTPTLAPAPSPPSASAPPSPHPSRKAKRRQLLWLGRVEHRLRAVDSMSGQELWNLTVSELTPL 310
P A+ + + DD A +L+ ++ VHA+D S GG+ WSFD+G PLV SYQ + P + LIP +DGS+LVHT +G++R L A LV++ PFL G YTG++ S +D G V Q SG +A+ + + RL +R ++W+GR ++ +RA D +GQE WNLT+ E L
Sbjct: 74 PSAAAAGGENQGDDAAASSVLLSSEIE--VHALDPSTGGLRWSFDTGEPLVKSYQ----QLPGTLDEK---KWLIPTLDGSILVHTT-QGLRRPGLKARLLVEQTPFLDPKG-VFYTGSKVSRIFGVDARTGEVRQVLSGDTADSLES--NRRL---------------------LARSGSDDDVIWIGRNDYTIRAFDVPTGQEEWNLTIGEFVSL 256
BLAST of EWM28935.1 vs. NCBI_GenBank
Match: gi|971519522|dbj|GAQ78686.1| (serine/threonine-protein kinase [Klebsormidium nitens]) HSP 1 Score: 94.3597 bits (233), Expect = 5.725e-17 Identity = 67/243 (27.57%), Postives = 121/243 (49.79%), Query Frame = 0
Query: 112 EALLIVGTVDGWVHAVDS-AGGVAWSFDSGAPLVTSYQGYDHEQPSS-----------APSAPPFPVLIPGVDGSLLVHTPGKGIQRLPLTAGQLVDRAPFLAADGRTLYTGARSSEALMIDLDAGTVVQRF---------------SGPSAEKIAHMIDPRLHTPTLAPAPSPPS---ASAPPSPHPSRKAKRRQLLWLGRVEHRLRAVDSMSGQELWNLTVSELTPL-------FPSGPLP 317
E+ L+V +DG +HA+D+ G + WSF SG PLV++ + ++ Q + ++ PG DG+L + G G+Q+LP+TA +LV +P + DG + GAR S M+D +G ++++F + P K+ +D ++ P A+ + PS + + + L++ R ++ ++++D++SG E WNL++ EL+ L FP+G LP
Sbjct: 67 ESTLLVAVLDGSLHALDADTGELKWSFSSGPPLVSASRRHNAVQRADEDRLGEPAESEKVEEEEEGMVFPGADGALYAYRRGHGVQKLPITARELVQASPSMTHDG-GIVVGARQSTVFMVDAASGKLLKKFDASTGTFEAVDGGDLTAPDDLKVGE-VDECIYVGEQEELEQPDHADRAAEVAAEGPSGMSCQHRPLFVVRTDYNVKSMDAVSGLERWNLSMGELSTLYNPAAWRFPTGSLP 307
BLAST of EWM28935.1 vs. NCBI_GenBank
Match: gi|255077605|ref|XP_002502437.1| (Endoribonuclease/protein kinase [Micromonas commoda] >gi|226517702|gb|ACO63695.1| Endoribonuclease/protein kinase [Micromonas commoda]) HSP 1 Score: 82.4185 bits (202), Expect = 4.991e-13 Identity = 66/213 (30.99%), Postives = 98/213 (46.01%), Query Frame = 0
Query: 115 LIVGTVDGWVHAVD-SAGGVAWSFDSGAPLVTSYQGYDHEQPSSAPSA--------PPFPVLIPGVDGSLLVHTPGKG--------IQRLPLTAGQLVDRAPFLAADGRTLYTGARSSEALMIDLDAGTVVQRFSGPSAEKIAHMIDPRLHTPTLAPAPSPPSASAPPSPHPSRKAKRRQLLWLGRVEHRLRAVDSMSGQELWNLTVSELTPL 310
L+V +DG V AVD S+G W+F SG PLV + H S P P + PG+DGSL + G G + RLP+TA QLV+ +P + DG + G R S +D G +++ F D +P + P+P+ + ++GR E+ +R+VDS +G+E WN+T E+TPL
Sbjct: 50 LLVSLLDGTVRAVDRSSGETLWTFSSGGPLVQA-----HRSVSDGPDGGGGVAIRGRTNPTVFPGIDGSLYAYGGGHGSGSGGTGEVSRLPVTARQLVEASPSVTRDG-GVVMGTRRSVVFAVDKRTGELLRSFDTDGTVVHGGNDDTGFFLSNESP-------TGDPTPNDVND----EAFYIGRTEYVVRSVDSSTGRERWNVTYGEVTPL 245
BLAST of EWM28935.1 vs. NCBI_GenBank
Match: gi|1050631198|ref|XP_017638534.1| (PREDICTED: serine/threonine-protein kinase/endoribonuclease IRE1b-like [Gossypium arboreum]) HSP 1 Score: 81.6481 bits (200), Expect = 8.937e-13 Identity = 64/229 (27.95%), Postives = 103/229 (44.98%), Query Frame = 0
Query: 90 SPPFPPPPPPPRASTDQPRSDDEALLIVGTVDGWVHAVDSAG-GVAWSFDSGAPLVTSYQGY-DHEQPSSAPSAPPFPVLIP-GVDGSLLVHTPGKG-IQRLPLTAGQLVDRAPFLAADGRTLYTGARSSEALMIDLDAGTVVQRFSG---PSAEKIAHMIDPRLHTPTLAPAPSPPSASAPPSPHPSRKAKRRQLLWLGRVEHRLRAVDSMSGQELWNLTVSELTPLF 311
S F PP PP D+ L +V T+DG +H VD V WSF SG P+ +SYQ + D + S P + + G D L VH+ G +++L L+A + V R P++A DG + G + + ++D ++G +VQ + PS +D + A P S K Q +++ R ++ L+ S + LWN+ S++ F
Sbjct: 33 SNRFLPPRPP-----------DDGLAVVVTLDGTMHLVDRVSRKVHWSFASGRPIYSSYQAFLDQDNDKLNTSGPNSDLYVDCGDDLQLYVHSRSHGKLKKLELSAEEYVRRTPYIAEDG-GITLGVKKTSIYLVDANSGRIVQTYRSDDPPST------LDIQNDAGETVRVTKDADALVESGPFNSTTVK--QFVYIMRTDYVLQYYSPNSAEVLWNVAFSKIDAEF 241
BLAST of EWM28935.1 vs. NCBI_GenBank
Match: gi|728812116|gb|KHG00664.1| (Serine/threonine-protein kinase/endoribonuclease IRE1 [Gossypium arboreum]) HSP 1 Score: 81.6481 bits (200), Expect = 9.017e-13 Identity = 64/229 (27.95%), Postives = 103/229 (44.98%), Query Frame = 0
Query: 90 SPPFPPPPPPPRASTDQPRSDDEALLIVGTVDGWVHAVDSAG-GVAWSFDSGAPLVTSYQGY-DHEQPSSAPSAPPFPVLIP-GVDGSLLVHTPGKG-IQRLPLTAGQLVDRAPFLAADGRTLYTGARSSEALMIDLDAGTVVQRFSG---PSAEKIAHMIDPRLHTPTLAPAPSPPSASAPPSPHPSRKAKRRQLLWLGRVEHRLRAVDSMSGQELWNLTVSELTPLF 311
S F PP PP D+ L +V T+DG +H VD V WSF SG P+ +SYQ + D + S P + + G D L VH+ G +++L L+A + V R P++A DG + G + + ++D ++G +VQ + PS +D + A P S K Q +++ R ++ L+ S + LWN+ S++ F
Sbjct: 33 SNRFLPPRPP-----------DDGLAVVVTLDGTMHLVDRVSRKVHWSFASGRPIYSSYQAFLDQDNDKLNTSGPNSDLYVDCGDDLQLYVHSRSHGKLKKLELSAEEYVRRTPYIAEDG-GITLGVKKTSIYLVDANSGRIVQTYRSDDPPST------LDIQNDAGETVRVTKDADALVESGPFNSTTVK--QFVYIMRTDYVLQYYSPNSAEVLWNVAFSKIDAEF 241
BLAST of EWM28935.1 vs. NCBI_GenBank
Match: gi|1029085090|ref|XP_016702754.1| (PREDICTED: serine/threonine-protein kinase/endoribonuclease IRE1b-like [Gossypium hirsutum]) HSP 1 Score: 78.1814 bits (191), Expect = 1.179e-11 Identity = 61/229 (26.64%), Postives = 100/229 (43.67%), Query Frame = 0
Query: 90 SPPFPPPPPPPRASTDQPRSDDEALLIVGTVDGWVHAVDSAG-GVAWSFDSGAPLVTSYQGY-DHEQPSSAPSAPPFPVLIP-GVDGSLLVHTPGKG-IQRLPLTAGQLVDRAPFLAADGRTLYTGARSSEALMIDLDAGTVVQRFSG---PSAEKIAHMIDPRLHTPTLAPAPSPPSASAPPSPHPSRKAKRRQLLWLGRVEHRLRAVDSMSGQELWNLTVSELTPLF 311
S F PP PP D+ L +V T+DG +H VD V WSF SG P+ +SYQ + D + S P + + G D + VH+ G +++L L+ + V R P++A DG + G + + ++D ++G +VQ + PS I A A P +Q +++ R ++ L+ S + LWN+ S++ F
Sbjct: 33 SNRFLPPRPP-----------DDGLAVVVTLDGTMHLVDRVSRKVHWSFASGRPIYSSYQAFLDQDNDKLNTSGPNSDLYVDCGDDLQVYVHSRSHGKLKKLELSCEEYVRRTPYIAEDG-GITLGVKKTSIYLVDANSGRIVQTYRSDDPPSTLDI--------QNDAGETVRWTKDADALVESGPFNSTTVKQFVYIMRTDYVLQYYSPNSAEVLWNVAFSKIDAEF 241
BLAST of EWM28935.1 vs. NCBI_GenBank
Match: gi|747046557|ref|XP_011100255.1| (serine/threonine-protein kinase/endoribonuclease IRE1b isoform X1 [Sesamum indicum]) HSP 1 Score: 75.0998 bits (183), Expect = 9.358e-11 Identity = 64/226 (28.32%), Postives = 105/226 (46.46%), Query Frame = 0
Query: 92 PFPPPPPPPRASTDQPRSDDEALLIVGTVDGWVHAVD-SAGGVAWSFDSGAPLVTSYQGY---DHEQPSSAPSAPPFPVLIPGVDGSLLVHTPGKGIQRLPLTAGQLVDRAPFLAADGRTLYTGARSSEALMIDLDAGTVVQRFSGPSAEKIAHMIDPRLHTPTLAPAPSPPSASAPPSPHPSRKAKRRQLLWLGRVEHRLRAVDSMSGQELWNLTVSELTPLFPS 313
P P P PP + T R D A IV DG V+ V+ +G V WSF SG + +SYQ D E+ +++ F + G D L +H G +LPLTA + V R PF++A G + G++ S ++D G VV+ F + + + D + T + PP+P + ++ L++ R ++ L+ +G+ LW L +++ F
Sbjct: 31 PDPGPENPPLSLT---RKHDTA--IVAAPDGTVYLVEIGSGKVLWSFSSGPSIYSSYQQVPNGDGEKLNASADGDNFYIDC-GEDWELYMHGTGLTKVKLPLTAEEFVKRTPFVSAGGGVM-LGSKKSAVFLVDAKTGKVVRTFRSDNLQSVGEQGDEENSSLT----RTDIKQWLPPTPMDTEAVEKP--LYVTRTDYALKYTSVKTGKVLWYLMFADIEASFQC 243
BLAST of EWM28935.1 vs. NCBI_GenBank
Match: gi|823132798|ref|XP_012464291.1| (PREDICTED: serine/threonine-protein kinase/endoribonuclease IRE1b [Gossypium raimondii] >gi|763746763|gb|KJB14202.1| hypothetical protein B456_002G114100 [Gossypium raimondii]) HSP 1 Score: 73.559 bits (179), Expect = 3.524e-10 Identity = 57/205 (27.80%), Postives = 93/205 (45.37%), Query Frame = 0
Query: 114 LLIVGTVDGWVHAVDS-AGGVAWSFDSGAPLVTSYQGY-DHEQPSSAPSAPPFPVLIP-GVDGSLLVHTPGKGIQ-RLPLTAGQLVDRAPFLAADGRTLYTGARSSEALMIDLDAGTVVQRFSG---PSAEKIAHMIDPRLHTPTLAPAPSPPSASAPPSPHPSRKAKRRQLLWLGRVEHRLRAVDSMSGQELWNLTVSELTPLF 311
L +V T+DG +H VD + V WSF SG P+ +SYQ + D + S P + + G D L VH+ G Q +L L+A + V R P++A DG + G + + ++D ++G +VQ + PS I A A P +Q +++ R ++ L+ S + LWN+ S++ F
Sbjct: 46 LAVVVTLDGTMHLVDRGSRKVHWSFASGRPIYSSYQAFLDQDNDKLNASGPNSDLYVDCGDDLQLYVHSRSHGKQKKLELSAEEYVRRTPYIAEDG-GITLGVKKTSIYLVDANSGRIVQTYRSDDPPSTLDI--------QNDAGKTVRWTKGADALVEFGPFNSTTVKQFVYIMRTDYVLQYYSPNSAEVLWNVAFSKIDAEF 241
BLAST of EWM28935.1 vs. NCBI_GenBank
Match: gi|909127304|gb|KNE54615.1| (IRE protein kinase [Allomyces macrogynus ATCC 38327]) HSP 1 Score: 71.633 bits (174), Expect = 1.545e-9 Identity = 61/200 (30.50%), Postives = 95/200 (47.50%), Query Frame = 0
Query: 114 LLIVGTVDGWVHAVD-SAGGVAWSF-DSGAPLVTSYQGYDHEQPSSAPSAPPFPVLI-PGVDGSLLVHTPGKGIQRLPLTAGQLVDRAPFLAADGRTLYTGARSSEALMIDLDAGTVVQRFSGPSAEKIAHMIDPRLHTPTLAPAPSPPSASAPPSPHPSRKAKRRQLLWLGRVEHRLRAVDSMSGQELWNLTVSELTPL 310
+L+V TVDG +HA+ S G + WS D PLV + ++ P PP + P DG+L VH GK IQRLP++ LV +PF A DG T+Y G +++ L +D +G V+ + A A+ +D H AP S +P A ++LGR ++ + + WN++ +E +
Sbjct: 201 MLLVATVDGALHALRRSTGHLVWSLADHAGPLVHTATAAAARSDATGP--PPLTYIADPMGDGALYVHQAGKAIQRLPVSIKHLVRESPFRANDG-TVYLGHKATRFLAVDAHSGRVLHDY---GAGGHANALDGARHAAECLRAPLDSSVRSPLV-----DASLHAPIFLGRTDYVVSIHEPGRRAPRWNISFAEYESM 389 The following BLAST results are available for this feature:
BLAST of EWM28935.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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