rna1730, rna1730 (mRNA) Nannochloropsis gaditana

Overview
Namerna1730
Unique Namerna1730
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length761
Alignment locationCM002457.1:1362265..1362731 -

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Properties
Property NameValue
Productacetyl-coenzyme a transporter 1
Orig transcript idgnl|cribi|Naga_102884g1.3516.mrna
Orig protein idgnl|cribi|Naga_102884g1.3516
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1362265..1362731 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102884g1gene1664Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna1730rna1730-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28947.1cds1726Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna1730 ID=rna1730|Name=rna1730|organism=Nannochloropsis gaditana|type=mRNA|length=761bp
CTCCCTCCCTCCCTCTCTTTCAGGCCTGGTCACCCTGGGCGGCTTCCTCT
TCTTCTGGGGCTGGGTCTTCCTCAGCACCACCCTCCTCGTGGCCCTCAAG
CCGGAGGAGCGGAAGCGAGAGGAGGAGCCCACCGCCCTCACCCCGAGCGT
CTCCAAGACCTACCAGCAGCTATGGCGTATCCTCAAGCTCCCTCCCGTGC
GCTCCATGTGCCTGGTGCTCCTGACCGTCAAGGCGGGCTTCGCCGTCACG
GACGCCGCCACCAACCTGAAGTTGATCGAGTACGGGATGCCCAAGGAGGA
GATTGCCCTCATGTCTCCGCTCCTCATCCTCACGGGCATTCTCGTTCCCG
TCCTCCTCACCCGGCAGACGTCTGGTCCCCGGCCCCTCTCCGTCTTCCTG
AAAGCCTTCGCCCCCCGCCTTCTCGTCGGCCTCCTCTACTTAGGCCTGCT
GCCCCTCGCCCACCGCGCCTACCCCCACTCGACCTCCCTCCCCCCCTCCT
TCCCCCCCGTCCTCTTCCGCCTCCTCTTCCTCACGACGGTGGGCTTGCGG
GAGGTGGCTGCCAACAGCATGTTCATCAGCCAGATGGCCTTCTTCGCCCG
TGTCTCCGACCCAGCCATCGGAGGCACCTACATGACCTTGCTCAACACCG
TCAGCAACTTGGGCTCCTCCTGGGTGCGCACAGCCTCCTTGGCCGCCCTG
GACGTGGTCACCTTCCGCTCCTGTCGAGGGGAGGGCGGGGGGGGAGGGCG
ACTGGGTGTGG
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protein sequence of rna1730

>rna1730-protein ID=rna1730-protein|Name=rna1730|organism=Nannochloropsis gaditana|type=polypeptide|length=70bp
MATQDIAVDGWALTMLSRENVGLASTCNTIGQTLGYFLAHVGFLALNSAE
TCNRFLRRESLDQGGSKPGR
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mRNA from alignment at CM002457.1:1362265..1362731-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna1730 ID=rna1730|Name=rna1730|organism=Nannochloropsis gaditana|type=mRNA|length=467bp|location=Sequence derived from alignment at CM002457.1:1362265..1362731- (Nannochloropsis gaditana)
ATGGCAACGCAAGACATCGCCGTCGACGGGTGGGCCCTGACCATGTTGAG TCGCGAGAACGTCGGCCTTGGTACGTCCCTGAAGGCTCCATCTTGTCCCG CCTGCTCGCGCATTTTCACGCCCCCCTTCCTCTTCTCTATCTGCATGTAT GCGGCACAGCCTCCACTTGCAACACCATTGGGCAGACGCTAGGTAGGTGG ACAGGCCCCTGTCCTTGCGCACGCGCAACAGGCGACCTTGACGCCCTCCC CCCGCCCCCTTCCTCCGTCCCTCCCTCCCTCCCTCCCTACAACCCCTTCC AGGCTATTTTCTGGCCCACGTCGGCTTCCTGGCTCTCAACTCCGCCGAGA CCTGCAACCGCTTCTTGAGGCGAGAGTCCCTCGACCAGGGTGGGTCTGTC GTCGGATTTTATGGCCAGTTTGCTCTCTCTTCCCGCCCCATCCCTCTCGG AGAAACCTGGGCGGTAA
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Coding sequence (CDS) from alignment at CM002457.1:1362265..1362731-

>rna1730 ID=rna1730|Name=rna1730|organism=Nannochloropsis gaditana|type=CDS|length=852bp|location=Sequence derived from alignment at CM002457.1:1362265..1362731- (Nannochloropsis gaditana)
AAACCTGGGCGGTAAGCTATTTTCTGGCCCACGTCGGCTTCCTGGCTCTC
AACTCCGCCGAGACCTGCAACCGCTTCTTGAGGCGAGAGTCCCTCGACCA
GGGTGGGTCTCCTCCACTTGCAACACCATTGGGCAGACGCTAGATGGCAA
CGCAAGACATCGCCGTCGACGGGTGGGCCCTGACCATGTTGAGTCGCGAG
AACGTCGGCCTTGAAACCTGGGCGGTAAGCTATTTTCTGGCCCACGTCGG
CTTCCTGGCTCTCAACTCCGCCGAGACCTGCAACCGCTTCTTGAGGCGAG
AGTCCCTCGACCAGGGTGGGTCTCCTCCACTTGCAACACCATTGGGCAGA
CGCTAGATGGCAACGCAAGACATCGCCGTCGACGGGTGGGCCCTGACCAT
GTTGAGTCGCGAGAACGTCGGCCTTGAAACCTGGGCGGTAAGCTATTTTC
TGGCCCACGTCGGCTTCCTGGCTCTCAACTCCGCCGAGACCTGCAACCGC
TTCTTGAGGCGAGAGTCCCTCGACCAGGGTGGGTCTCCTCCACTTGCAAC
ACCATTGGGCAGACGCTAGATGGCAACGCAAGACATCGCCGTCGACGGGT
GGGCCCTGACCATGTTGAGTCGCGAGAACGTCGGCCTTGAAACCTGGGCG
GTAAGCTATTTTCTGGCCCACGTCGGCTTCCTGGCTCTCAACTCCGCCGA
GACCTGCAACCGCTTCTTGAGGCGAGAGTCCCTCGACCAGGGTGGGTCTC
CTCCACTTGCAACACCATTGGGCAGACGCTAGATGGCAACGCAAGACATC
GCCGTCGACGGGTGGGCCCTGACCATGTTGAGTCGCGAGAACGTCGGCCT
TG
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Synonyms
Publications